RNA–Protein interactions for RNA: ENST00000506060.5

POLR2J3-211, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 3

Gene POLR2J3, Length 793 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-211ENST00000506060 NISCHQ9Y2I1 1504 aa27.32■■□□□ 1.96
POLR2J3-211ENST00000506060 CCDC180Q9P1Z9 1646 aa23.95■■□□□ 1.43
POLR2J3-211ENST00000506060 ZCCHC6Q5VYS8 1495 aaKnown RBP22.92■■□□□ 1.26
POLR2J3-211ENST00000506060 DCAF1Q9Y4B6 1507 aa22.67■■□□□ 1.22
POLR2J3-211ENST00000506060 ABCC9O60706 1549 aa22.62■■□□□ 1.21
POLR2J3-211ENST00000506060 DCAF8L2P0C7V8 631 aa22.57■■□□□ 1.2
POLR2J3-211ENST00000506060 MYO15BQ96JP2 1530 aa22.47■■□□□ 1.19
POLR2J3-211ENST00000506060 NACADO15069 1562 aa22.34■■□□□ 1.17
POLR2J3-211ENST00000506060 RB1CC1Q8TDY2 1594 aa22.17■■□□□ 1.14
POLR2J3-211ENST00000506060 SHROOM4Q9ULL8 1493 aa22.1■■□□□ 1.13
POLR2J3-211ENST00000506060 SCRIBQ14160 1630 aa21.9■■□□□ 1.1
POLR2J3-211ENST00000506060 UNC13AQ9UPW8 1703 aa21.59■■□□□ 1.05
POLR2J3-211ENST00000506060 BICRAQ9NZM4 1560 aa21.36■■□□□ 1.01
POLR2J3-211ENST00000506060 SUPT5HO00267 1087 aaKnown RBP21.28■■□□□ 1
POLR2J3-211ENST00000506060 PABPN1Q86U42 306 aaKnown RBP eCLIP21.27■■□□□ 1
POLR2J3-211ENST00000506060 BAZ1AQ9NRL2 1556 aaPredicted RBP21.16■□□□□ 0.98
POLR2J3-211ENST00000506060 CECR2Q9BXF3 1484 aa21.13■□□□□ 0.97
POLR2J3-211ENST00000506060 RSF1Q96T23 1441 aaPredicted RBP21.12■□□□□ 0.97
POLR2J3-211ENST00000506060 MROH2BQ7Z745 1585 aa21.04■□□□□ 0.96
POLR2J3-211ENST00000506060 SMARCA4P51532 1647 aa21.02■□□□□ 0.96
POLR2J3-211ENST00000506060 WIZO95785 1651 aa20.86■□□□□ 0.93
POLR2J3-211ENST00000506060 PEG3Q9GZU2 1588 aa20.8■□□□□ 0.92
POLR2J3-211ENST00000506060 EIF4G1Q04637 1599 aaKnown RBP20.78■□□□□ 0.92
POLR2J3-211ENST00000506060 SMARCA2P51531 1590 aa20.77■□□□□ 0.92
POLR2J3-211ENST00000506060 TOP2AP11388 1531 aaKnown RBP20.73■□□□□ 0.91
POLR2J3-211ENST00000506060 ATAD2BQ9ULI0 1458 aa20.69■□□□□ 0.9
POLR2J3-211ENST00000506060 BAZ1BQ9UIG0 1483 aaKnown RBP20.62■□□□□ 0.89
POLR2J3-211ENST00000506060 NCAPD3P42695 1498 aa20.56■□□□□ 0.88
POLR2J3-211ENST00000506060 HMGXB3Q12766 1538 aa20.56■□□□□ 0.88
POLR2J3-211ENST00000506060 CC2D2AQ9P2K1 1620 aa20.49■□□□□ 0.87
POLR2J3-211ENST00000506060 CCDC88BA6NC98 1476 aa20.46■□□□□ 0.87
POLR2J3-211ENST00000506060 CHIC1Q5VXU3 224 aa20.32■□□□□ 0.84
POLR2J3-211ENST00000506060 TRIM41Q8WV44 630 aa20.09■□□□□ 0.81
POLR2J3-211ENST00000506060 CFTRP13569 1480 aa20.07■□□□□ 0.8
POLR2J3-211ENST00000506060 CADPSQ9ULU8 1353 aa20.04■□□□□ 0.8
POLR2J3-211ENST00000506060 PRDM2Q13029 1718 aa20.02■□□□□ 0.8
POLR2J3-211ENST00000506060 ABCC8Q09428 1581 aa19.95■□□□□ 0.78
POLR2J3-211ENST00000506060 WRNQ14191 1432 aaPredicted RBP eCLIP19.93■□□□□ 0.781e-6■■■■■ 58.5
POLR2J3-211ENST00000506060 LAMC3Q9Y6N6 1575 aa19.92■□□□□ 0.78
POLR2J3-211ENST00000506060 DNAJC5BQ9UF47 199 aa19.92■□□□□ 0.78
POLR2J3-211ENST00000506060 FANCD2Q9BXW9 1451 aa19.8■□□□□ 0.76
POLR2J3-211ENST00000506060 PDS5BQ9NTI5 1447 aa19.8■□□□□ 0.76
POLR2J3-211ENST00000506060 TOP2BQ02880 1626 aa19.78■□□□□ 0.76
POLR2J3-211ENST00000506060 SYNJ1O43426 1573 aa19.78■□□□□ 0.76
POLR2J3-211ENST00000506060 NESP48681 1621 aa19.77■□□□□ 0.76
POLR2J3-211ENST00000506060 BIVM-ERCC5R4GMW8 1640 aa19.76■□□□□ 0.75
POLR2J3-211ENST00000506060 CEP164Q9UPV0 1460 aa19.73■□□□□ 0.75
POLR2J3-211ENST00000506060 EEA1Q15075 1411 aa19.7■□□□□ 0.74
POLR2J3-211ENST00000506060 CUX1P39880 1505 aa19.7■□□□□ 0.74
POLR2J3-211ENST00000506060 DNMBPQ6XZF7 1577 aa19.63■□□□□ 0.73
POLR2J3-211ENST00000506060 FAM9AQ8IZU1 332 aaPredicted RBP19.61■□□□□ 0.73
POLR2J3-211ENST00000506060 KIF21AQ7Z4S6 1674 aa19.59■□□□□ 0.73
POLR2J3-211ENST00000506060 TOPBP1Q92547 1522 aa19.56■□□□□ 0.72
POLR2J3-211ENST00000506060 SOGA1O94964 1423 aa19.56■□□□□ 0.72
POLR2J3-211ENST00000506060 FGD5Q6ZNL6 1462 aa19.53■□□□□ 0.72
POLR2J3-211ENST00000506060 URB2Q14146 1524 aaKnown RBP19.51■□□□□ 0.71
POLR2J3-211ENST00000506060 CSRNP3Q8WYN3 585 aa19.51■□□□□ 0.71
POLR2J3-211ENST00000506060 ERCC6Q03468 1493 aa19.5■□□□□ 0.71
POLR2J3-211ENST00000506060 MRC2Q9UBG0 1479 aa19.5■□□□□ 0.71
POLR2J3-211ENST00000506060 KIF27Q86VH2 1401 aa19.49■□□□□ 0.71
POLR2J3-211ENST00000506060 LOC105371045A0A1W2PR82 267 aa19.46■□□□□ 0.71
POLR2J3-211ENST00000506060 POLA1P09884 1462 aaPredicted RBP19.44■□□□□ 0.7
POLR2J3-211ENST00000506060 RUSC2Q8N2Y8 1516 aa19.44■□□□□ 0.7
POLR2J3-211ENST00000506060 CUX2O14529 1486 aa19.41■□□□□ 0.7
POLR2J3-211ENST00000506060 ABCA10Q8WWZ4 1543 aa19.4■□□□□ 0.7
POLR2J3-211ENST00000506060 WDR62O43379 1518 aa19.38■□□□□ 0.69
POLR2J3-211ENST00000506060 KIF21BO75037 1637 aa19.36■□□□□ 0.69
POLR2J3-211ENST00000506060 GOLGA3Q08378 1498 aa19.35■□□□□ 0.69
POLR2J3-211ENST00000506060 RAD54L2Q9Y4B4 1467 aa19.34■□□□□ 0.69
POLR2J3-211ENST00000506060 THOC2Q8NI27 1593 aaKnown RBP19.31■□□□□ 0.68
POLR2J3-211ENST00000506060 WDR97A6NE52 1622 aa19.29■□□□□ 0.68
POLR2J3-211ENST00000506060 EHMT2Q96KQ7 1210 aa19.28■□□□□ 0.68
POLR2J3-211ENST00000506060 ERICH3Q5RHP9 1530 aa19.28■□□□□ 0.68
POLR2J3-211ENST00000506060 IFT140Q96RY7 1462 aa19.28■□□□□ 0.68
POLR2J3-211ENST00000506060 TNIKQ9UKE5 1360 aa19.27■□□□□ 0.68
POLR2J3-211ENST00000506060 UBTFP17480 764 aaKnown RBP19.26■□□□□ 0.67
POLR2J3-211ENST00000506060 PRXQ9BXM0 1461 aa19.26■□□□□ 0.67
POLR2J3-211ENST00000506060 TARBP1Q13395 1621 aaKnown RBP19.25■□□□□ 0.67
POLR2J3-211ENST00000506060 IGF1RP08069 1367 aa19.24■□□□□ 0.67
POLR2J3-211ENST00000506060 ABCA5Q8WWZ7 1642 aa19.22■□□□□ 0.67
POLR2J3-211ENST00000506060 GAPVD1Q14C86 1478 aa19.21■□□□□ 0.67
POLR2J3-211ENST00000506060 CUL7Q14999 1698 aa19.2■□□□□ 0.66
POLR2J3-211ENST00000506060 RAPGEF2Q9Y4G8 1499 aa19.19■□□□□ 0.66
POLR2J3-211ENST00000506060 CARMIL1Q5VZK9 1371 aa19.19■□□□□ 0.66
POLR2J3-211ENST00000506060 TDRD9Q8NDG6 1382 aaKnown RBP19.18■□□□□ 0.66
POLR2J3-211ENST00000506060 CEP162Q5TB80 1403 aa19.11■□□□□ 0.65
POLR2J3-211ENST00000506060 GRIN2BQ13224 1484 aa19.1■□□□□ 0.65
POLR2J3-211ENST00000506060 PBRM1Q86U86 1689 aa19.1■□□□□ 0.65
POLR2J3-211ENST00000506060 AQRO60306 1485 aaKnown RBP eCLIP19.07■□□□□ 0.644e-8■■■■□ 22.5
POLR2J3-211ENST00000506060 ZNF608Q9ULD9 1512 aaPredicted RBP19.04■□□□□ 0.64
POLR2J3-211ENST00000506060 EIF4G3O43432 1585 aaKnown RBP19.03■□□□□ 0.64
POLR2J3-211ENST00000506060 FHAD1B1AJZ9 1412 aa19.03■□□□□ 0.64
POLR2J3-211ENST00000506060 CLIP1P30622 1438 aa19.02■□□□□ 0.64
POLR2J3-211ENST00000506060 ADAMTS12P58397 1594 aa18.98■□□□□ 0.63
POLR2J3-211ENST00000506060 MAGI1Q96QZ7 1491 aaPredicted RBP18.97■□□□□ 0.63
POLR2J3-211ENST00000506060 CTTNBP2Q8WZ74 1663 aa18.94■□□□□ 0.62
POLR2J3-211ENST00000506060 SNAPC4Q5SXM2 1469 aa18.92■□□□□ 0.62
POLR2J3-211ENST00000506060 SYNJ2O15056 1496 aa18.87■□□□□ 0.61
POLR2J3-211ENST00000506060 RANGAP1P46060 587 aaPredicted RBP18.87■□□□□ 0.61
POLR2J3-211ENST00000506060 CHMP7Q8WUX9 453 aaPredicted RBP18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 121.5 ms