RNA–Protein interactions for RNA: ENST00000505996.1

SLC41A3-207, Transcript of solute carrier family 41 member 3, humanhuman

TSL 4

Gene SLC41A3, Length 541 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC41A3-207ENST00000505996 NISCHQ9Y2I1 1504 aa33.16■■■□□ 2.9
SLC41A3-207ENST00000505996 CCDC180Q9P1Z9 1646 aa29.62■■■□□ 2.33
SLC41A3-207ENST00000505996 ABCC9O60706 1549 aa29.42■■■□□ 2.3
SLC41A3-207ENST00000505996 RB1CC1Q8TDY2 1594 aa28.11■■■□□ 2.09
SLC41A3-207ENST00000505996 DCAF8L2P0C7V8 631 aa28■■■□□ 2.07
SLC41A3-207ENST00000505996 NACADO15069 1562 aa27.98■■■□□ 2.07
SLC41A3-207ENST00000505996 MYO15BQ96JP2 1530 aa27.65■■■□□ 2.02
SLC41A3-207ENST00000505996 ZCCHC6Q5VYS8 1495 aaKnown RBP27.52■■■□□ 2
SLC41A3-207ENST00000505996 PABPN1Q86U42 306 aaKnown RBP eCLIP27.45■■□□□ 1.98
SLC41A3-207ENST00000505996 DCAF1Q9Y4B6 1507 aa27.39■■□□□ 1.98
SLC41A3-207ENST00000505996 UNC13AQ9UPW8 1703 aa27.37■■□□□ 1.97
SLC41A3-207ENST00000505996 DNAJC5BQ9UF47 199 aa27.32■■□□□ 1.96
SLC41A3-207ENST00000505996 BICRAQ9NZM4 1560 aa27.21■■□□□ 1.95
SLC41A3-207ENST00000505996 SCRIBQ14160 1630 aa27.04■■□□□ 1.92
SLC41A3-207ENST00000505996 SHROOM4Q9ULL8 1493 aa26.94■■□□□ 1.9
SLC41A3-207ENST00000505996 EIF4G1Q04637 1599 aaKnown RBP26.58■■□□□ 1.85
SLC41A3-207ENST00000505996 CC2D2AQ9P2K1 1620 aa26.57■■□□□ 1.84
SLC41A3-207ENST00000505996 CECR2Q9BXF3 1484 aa26.49■■□□□ 1.83
SLC41A3-207ENST00000505996 NCAPD3P42695 1498 aa25.82■■□□□ 1.72
SLC41A3-207ENST00000505996 SMARCA4P51532 1647 aa25.8■■□□□ 1.72
SLC41A3-207ENST00000505996 ATAD2BQ9ULI0 1458 aa25.78■■□□□ 1.72
SLC41A3-207ENST00000505996 BAZ1AQ9NRL2 1556 aaPredicted RBP25.74■■□□□ 1.71
SLC41A3-207ENST00000505996 SMARCA2P51531 1590 aa25.73■■□□□ 1.71
SLC41A3-207ENST00000505996 HMGXB3Q12766 1538 aa25.64■■□□□ 1.7
SLC41A3-207ENST00000505996 BAZ1BQ9UIG0 1483 aaKnown RBP25.58■■□□□ 1.69
SLC41A3-207ENST00000505996 MROH2BQ7Z745 1585 aa25.53■■□□□ 1.68
SLC41A3-207ENST00000505996 PEG3Q9GZU2 1588 aa25.52■■□□□ 1.68
SLC41A3-207ENST00000505996 ERCC6Q03468 1493 aa25.44■■□□□ 1.66
SLC41A3-207ENST00000505996 NESP48681 1621 aa25.31■■□□□ 1.64
SLC41A3-207ENST00000505996 CUX2O14529 1486 aa25.26■■□□□ 1.63
SLC41A3-207ENST00000505996 WIZO95785 1651 aa25.23■■□□□ 1.63
SLC41A3-207ENST00000505996 LAMC3Q9Y6N6 1575 aa25.2■■□□□ 1.62
SLC41A3-207ENST00000505996 RSF1Q96T23 1441 aaPredicted RBP25.12■■□□□ 1.61
SLC41A3-207ENST00000505996 PDS5BQ9NTI5 1447 aa25.1■■□□□ 1.61
SLC41A3-207ENST00000505996 CADPSQ9ULU8 1353 aa25.07■■□□□ 1.6
SLC41A3-207ENST00000505996 THOC2Q8NI27 1593 aaKnown RBP24.99■■□□□ 1.59
SLC41A3-207ENST00000505996 KIF21AQ7Z4S6 1674 aa24.97■■□□□ 1.59
SLC41A3-207ENST00000505996 TOP2AP11388 1531 aaKnown RBP24.96■■□□□ 1.59
SLC41A3-207ENST00000505996 DNAJC5Q9H3Z4 198 aa24.95■■□□□ 1.58
SLC41A3-207ENST00000505996 MRC2Q9UBG0 1479 aa24.83■■□□□ 1.57
SLC41A3-207ENST00000505996 CFTRP13569 1480 aa24.82■■□□□ 1.56
SLC41A3-207ENST00000505996 CEP164Q9UPV0 1460 aa24.8■■□□□ 1.56
SLC41A3-207ENST00000505996 FANCD2Q9BXW9 1451 aa24.78■■□□□ 1.56
SLC41A3-207ENST00000505996 WDR62O43379 1518 aa24.74■■□□□ 1.55
SLC41A3-207ENST00000505996 CCDC88BA6NC98 1476 aa24.69■■□□□ 1.54
SLC41A3-207ENST00000505996 PRDM2Q13029 1718 aa24.53■■□□□ 1.52
SLC41A3-207ENST00000505996 URB2Q14146 1524 aaKnown RBP24.52■■□□□ 1.52
SLC41A3-207ENST00000505996 ABCC8Q09428 1581 aa24.33■■□□□ 1.49
SLC41A3-207ENST00000505996 TOPBP1Q92547 1522 aa24.32■■□□□ 1.48
SLC41A3-207ENST00000505996 IFT140Q96RY7 1462 aa24.29■■□□□ 1.48
SLC41A3-207ENST00000505996 SUPT5HO00267 1087 aaKnown RBP24.28■■□□□ 1.48
SLC41A3-207ENST00000505996 DNMBPQ6XZF7 1577 aa24.26■■□□□ 1.47
SLC41A3-207ENST00000505996 OSCARQ8IYS5 282 aa24.19■■□□□ 1.46
SLC41A3-207ENST00000505996 ZNF608Q9ULD9 1512 aaPredicted RBP24.19■■□□□ 1.46
SLC41A3-207ENST00000505996 POLA1P09884 1462 aaPredicted RBP24.09■■□□□ 1.45
SLC41A3-207ENST00000505996 EIF4G3O43432 1585 aaKnown RBP24.07■■□□□ 1.44
SLC41A3-207ENST00000505996 TARBP1Q13395 1621 aaKnown RBP24.06■■□□□ 1.44
SLC41A3-207ENST00000505996 AQRO60306 1485 aaKnown RBP eCLIP24.03■■□□□ 1.44
SLC41A3-207ENST00000505996 TRIM41Q8WV44 630 aa24.03■■□□□ 1.44
SLC41A3-207ENST00000505996 SOGA1O94964 1423 aa24.02■■□□□ 1.44
SLC41A3-207ENST00000505996 RAD54L2Q9Y4B4 1467 aa24■■□□□ 1.43
SLC41A3-207ENST00000505996 FGD5Q6ZNL6 1462 aa23.99■■□□□ 1.43
SLC41A3-207ENST00000505996 CUX1P39880 1505 aa23.99■■□□□ 1.43
SLC41A3-207ENST00000505996 TDRD9Q8NDG6 1382 aaKnown RBP23.93■■□□□ 1.42
SLC41A3-207ENST00000505996 FBLN2P98095 1184 aa23.9■■□□□ 1.42
SLC41A3-207ENST00000505996 WDR97A6NE52 1622 aa23.87■■□□□ 1.41
SLC41A3-207ENST00000505996 CHD1O14646 1710 aa23.81■■□□□ 1.4
SLC41A3-207ENST00000505996 SNAPC4Q5SXM2 1469 aa23.8■■□□□ 1.4
SLC41A3-207ENST00000505996 GRIN2BQ13224 1484 aa23.78■■□□□ 1.4
SLC41A3-207ENST00000505996 RIMBP3CA6NJZ7 1639 aa23.77■■□□□ 1.4
SLC41A3-207ENST00000505996 RIMBP3BA6NNM3 1639 aa23.77■■□□□ 1.4
SLC41A3-207ENST00000505996 RIMBP3Q9UFD9 1639 aa23.77■■□□□ 1.4
SLC41A3-207ENST00000505996 CHMP7Q8WUX9 453 aaPredicted RBP23.75■■□□□ 1.39
SLC41A3-207ENST00000505996 MAGI1Q96QZ7 1491 aaPredicted RBP23.75■■□□□ 1.39
SLC41A3-207ENST00000505996 ARHGEF11O15085 1522 aa23.74■■□□□ 1.39
SLC41A3-207ENST00000505996 WRNQ14191 1432 aaPredicted RBP eCLIP23.73■■□□□ 1.39
SLC41A3-207ENST00000505996 GAPVD1Q14C86 1478 aa23.73■■□□□ 1.39
SLC41A3-207ENST00000505996 ABCA10Q8WWZ4 1543 aa23.73■■□□□ 1.39
SLC41A3-207ENST00000505996 TOP2BQ02880 1626 aa23.67■■□□□ 1.38
SLC41A3-207ENST00000505996 SYNJ2O15056 1496 aa23.67■■□□□ 1.38
SLC41A3-207ENST00000505996 BIVM-ERCC5R4GMW8 1640 aa23.65■■□□□ 1.38
SLC41A3-207ENST00000505996 PBRM1Q86U86 1689 aa23.64■■□□□ 1.38
SLC41A3-207ENST00000505996 ABCA5Q8WWZ7 1642 aa23.64■■□□□ 1.38
SLC41A3-207ENST00000505996 SYNJ1O43426 1573 aa23.64■■□□□ 1.37
SLC41A3-207ENST00000505996 CYB5RLQ6IPT4 315 aa23.61■■□□□ 1.37
SLC41A3-207ENST00000505996 CLASP1Q7Z460 1538 aa23.56■■□□□ 1.36
SLC41A3-207ENST00000505996 ARAP1Q96P48 1450 aa23.51■■□□□ 1.35
SLC41A3-207ENST00000505996 ADAMTS12P58397 1594 aa23.46■■□□□ 1.35
SLC41A3-207ENST00000505996 GRIN2AQ12879 1464 aa23.46■■□□□ 1.35
SLC41A3-207ENST00000505996 ERICH3Q5RHP9 1530 aa23.44■■□□□ 1.34
SLC41A3-207ENST00000505996 FHAD1B1AJZ9 1412 aa23.44■■□□□ 1.34
SLC41A3-207ENST00000505996 NUP160Q12769 1436 aa23.35■■□□□ 1.33
SLC41A3-207ENST00000505996 CEP170Q5SW79 1584 aa23.33■■□□□ 1.33
SLC41A3-207ENST00000505996 TRHP20396 242 aaPredicted RBP23.31■■□□□ 1.32
SLC41A3-207ENST00000505996 KIF27Q86VH2 1401 aa23.28■■□□□ 1.32
SLC41A3-207ENST00000505996 ERCC6L2Q5T890 1561 aa23.2■■□□□ 1.3
SLC41A3-207ENST00000505996 IGF1RP08069 1367 aa23.2■■□□□ 1.3
SLC41A3-207ENST00000505996 SHROOM2Q13796 1616 aa23.19■■□□□ 1.3
SLC41A3-207ENST00000505996 JPH4Q96JJ6 628 aa23.17■■□□□ 1.3
SLC41A3-207ENST00000505996 CUL7Q14999 1698 aa23.15■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms