RNA–Protein interactions for RNA: ENST00000505971.5

TRIO-207, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 3

Gene TRIO, Length 605 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-207ENST00000505971 NISCHQ9Y2I1 1504 aa51.17■■■■■ 5.78
TRIO-207ENST00000505971 CCDC180Q9P1Z9 1646 aa45.87■■■■■ 4.93
TRIO-207ENST00000505971 ABCC9O60706 1549 aa45.71■■■■■ 4.91
TRIO-207ENST00000505971 RB1CC1Q8TDY2 1594 aa43.59■■■■■ 4.57
TRIO-207ENST00000505971 NACADO15069 1562 aa43.36■■■■■ 4.53
TRIO-207ENST00000505971 DCAF8L2P0C7V8 631 aa43■■■■■ 4.47
TRIO-207ENST00000505971 DNAJC5BQ9UF47 199 aa42.92■■■■■ 4.46
TRIO-207ENST00000505971 MYO15BQ96JP2 1530 aa42.87■■■■■ 4.45
TRIO-207ENST00000505971 UNC13AQ9UPW8 1703 aa42.65■■■■■ 4.42
TRIO-207ENST00000505971 PABPN1Q86U42 306 aaKnown RBP eCLIP42.58■■■■■ 4.41
TRIO-207ENST00000505971 ZCCHC6Q5VYS8 1495 aaKnown RBP42.42■■■■■ 4.38
TRIO-207ENST00000505971 BICRAQ9NZM4 1560 aa42.39■■■■■ 4.38
TRIO-207ENST00000505971 DCAF1Q9Y4B6 1507 aa42.33■■■■■ 4.37
TRIO-207ENST00000505971 SHROOM4Q9ULL8 1493 aa41.83■■■■■ 4.29
TRIO-207ENST00000505971 SCRIBQ14160 1630 aa41.7■■■■■ 4.27
TRIO-207ENST00000505971 CC2D2AQ9P2K1 1620 aa41.35■■■■■ 4.21
TRIO-207ENST00000505971 EIF4G1Q04637 1599 aaKnown RBP41.29■■■■■ 4.2
TRIO-207ENST00000505971 CECR2Q9BXF3 1484 aa41.2■■■■■ 4.19
TRIO-207ENST00000505971 NCAPD3P42695 1498 aa40.07■■■■■ 4
TRIO-207ENST00000505971 ATAD2BQ9ULI0 1458 aa39.92■■■■□ 3.98
TRIO-207ENST00000505971 SMARCA4P51532 1647 aa39.87■■■■□ 3.97
TRIO-207ENST00000505971 SMARCA2P51531 1590 aa39.78■■■■□ 3.96
TRIO-207ENST00000505971 HMGXB3Q12766 1538 aa39.73■■■■□ 3.95
TRIO-207ENST00000505971 BAZ1AQ9NRL2 1556 aaPredicted RBP39.68■■■■□ 3.94
TRIO-207ENST00000505971 PEG3Q9GZU2 1588 aa39.56■■■■□ 3.92
TRIO-207ENST00000505971 BAZ1BQ9UIG0 1483 aaKnown RBP39.47■■■■□ 3.91
TRIO-207ENST00000505971 CUX2O14529 1486 aa39.42■■■■□ 3.9
TRIO-207ENST00000505971 ERCC6Q03468 1493 aa39.42■■■■□ 3.9
TRIO-207ENST00000505971 MROH2BQ7Z745 1585 aa39.41■■■■□ 3.9
TRIO-207ENST00000505971 DNAJC5Q9H3Z4 198 aa39.35■■■■□ 3.89
TRIO-207ENST00000505971 NESP48681 1621 aa39.32■■■■□ 3.89
TRIO-207ENST00000505971 LAMC3Q9Y6N6 1575 aa39.09■■■■□ 3.85
TRIO-207ENST00000505971 THOC2Q8NI27 1593 aaKnown RBP38.93■■■■□ 3.82
TRIO-207ENST00000505971 WIZO95785 1651 aa38.91■■■■□ 3.82
TRIO-207ENST00000505971 PDS5BQ9NTI5 1447 aa38.85■■■■□ 3.81
TRIO-207ENST00000505971 CADPSQ9ULU8 1353 aa38.82■■■■□ 3.8
TRIO-207ENST00000505971 KIF21AQ7Z4S6 1674 aa38.81■■■■□ 3.8
TRIO-207ENST00000505971 RSF1Q96T23 1441 aaPredicted RBP38.64■■■■□ 3.78
TRIO-207ENST00000505971 MRC2Q9UBG0 1479 aa38.49■■■■□ 3.75
TRIO-207ENST00000505971 WDR62O43379 1518 aa38.43■■■■□ 3.74
TRIO-207ENST00000505971 TOP2AP11388 1531 aaKnown RBP38.43■■■■□ 3.74
TRIO-207ENST00000505971 CFTRP13569 1480 aa38.41■■■■□ 3.74
TRIO-207ENST00000505971 CEP164Q9UPV0 1460 aa38.34■■■■□ 3.73
TRIO-207ENST00000505971 FANCD2Q9BXW9 1451 aa38.33■■■■□ 3.73
TRIO-207ENST00000505971 URB2Q14146 1524 aaKnown RBP38.03■■■■□ 3.68
TRIO-207ENST00000505971 CCDC88BA6NC98 1476 aa38.03■■■■□ 3.68
TRIO-207ENST00000505971 PRDM2Q13029 1718 aa37.98■■■■□ 3.67
TRIO-207ENST00000505971 OSCARQ8IYS5 282 aa37.64■■■■□ 3.62
TRIO-207ENST00000505971 TOPBP1Q92547 1522 aa37.62■■■■□ 3.61
TRIO-207ENST00000505971 IFT140Q96RY7 1462 aa37.61■■■■□ 3.61
TRIO-207ENST00000505971 ABCC8Q09428 1581 aa37.58■■■■□ 3.61
TRIO-207ENST00000505971 ZNF608Q9ULD9 1512 aaPredicted RBP37.53■■■■□ 3.6
TRIO-207ENST00000505971 TRIM41Q8WV44 630 aa37.49■■■■□ 3.59
TRIO-207ENST00000505971 DNMBPQ6XZF7 1577 aa37.49■■■■□ 3.59
TRIO-207ENST00000505971 TARBP1Q13395 1621 aaKnown RBP37.32■■■■□ 3.57
TRIO-207ENST00000505971 EIF4G3O43432 1585 aaKnown RBP37.3■■■■□ 3.56
TRIO-207ENST00000505971 POLA1P09884 1462 aaPredicted RBP37.26■■■■□ 3.55
TRIO-207ENST00000505971 AQRO60306 1485 aaKnown RBP eCLIP37.2■■■■□ 3.55
TRIO-207ENST00000505971 RIMBP3CA6NJZ7 1639 aa37.1■■■■□ 3.53
TRIO-207ENST00000505971 RIMBP3BA6NNM3 1639 aa37.1■■■■□ 3.53
TRIO-207ENST00000505971 RIMBP3Q9UFD9 1639 aa37.1■■■■□ 3.53
TRIO-207ENST00000505971 RAD54L2Q9Y4B4 1467 aa37.09■■■■□ 3.53
TRIO-207ENST00000505971 SOGA1O94964 1423 aa37.07■■■■□ 3.52
TRIO-207ENST00000505971 ARHGEF11O15085 1522 aa37.01■■■■□ 3.52
TRIO-207ENST00000505971 CUX1P39880 1505 aa37.01■■■■□ 3.52
TRIO-207ENST00000505971 CHD1O14646 1710 aa37.01■■■■□ 3.51
TRIO-207ENST00000505971 FGD5Q6ZNL6 1462 aa37.01■■■■□ 3.51
TRIO-207ENST00000505971 TDRD9Q8NDG6 1382 aaKnown RBP36.98■■■■□ 3.51
TRIO-207ENST00000505971 WDR97A6NE52 1622 aa36.95■■■■□ 3.51
TRIO-207ENST00000505971 SUPT5HO00267 1087 aaKnown RBP36.86■■■■□ 3.49
TRIO-207ENST00000505971 FBLN2P98095 1184 aa36.85■■■■□ 3.49
TRIO-207ENST00000505971 SNAPC4Q5SXM2 1469 aa36.79■■■■□ 3.48
TRIO-207ENST00000505971 MAGI1Q96QZ7 1491 aaPredicted RBP36.75■■■■□ 3.47
TRIO-207ENST00000505971 GRIN2BQ13224 1484 aa36.74■■■■□ 3.47
TRIO-207ENST00000505971 CYB5RLQ6IPT4 315 aa36.71■■■■□ 3.47
TRIO-207ENST00000505971 ARAP1Q96P48 1450 aa36.66■■■■□ 3.46
TRIO-207ENST00000505971 CHMP7Q8WUX9 453 aaPredicted RBP36.65■■■■□ 3.46
TRIO-207ENST00000505971 CLASP1Q7Z460 1538 aa36.64■■■■□ 3.46
TRIO-207ENST00000505971 ABCA10Q8WWZ4 1543 aa36.64■■■■□ 3.46
TRIO-207ENST00000505971 GAPVD1Q14C86 1478 aa36.62■■■■□ 3.45
TRIO-207ENST00000505971 SYNJ2O15056 1496 aa36.62■■■■□ 3.45
TRIO-207ENST00000505971 SYNJ1O43426 1573 aa36.57■■■■□ 3.45
TRIO-207ENST00000505971 PBRM1Q86U86 1689 aa36.57■■■■□ 3.44
TRIO-207ENST00000505971 ABCA5Q8WWZ7 1642 aa36.56■■■■□ 3.44
TRIO-207ENST00000505971 WRNQ14191 1432 aaPredicted RBP eCLIP36.47■■■■□ 3.43
TRIO-207ENST00000505971 TOP2BQ02880 1626 aa36.45■■■■□ 3.43
TRIO-207ENST00000505971 BIVM-ERCC5R4GMW8 1640 aa36.45■■■■□ 3.43
TRIO-207ENST00000505971 GRIN2AQ12879 1464 aa36.27■■■■□ 3.4
TRIO-207ENST00000505971 ADAMTS12P58397 1594 aa36.24■■■■□ 3.39
TRIO-207ENST00000505971 TRHP20396 242 aaPredicted RBP36.2■■■■□ 3.39
TRIO-207ENST00000505971 NUP160Q12769 1436 aa36.19■■■■□ 3.38
TRIO-207ENST00000505971 FHAD1B1AJZ9 1412 aa36.17■■■■□ 3.38
TRIO-207ENST00000505971 ERICH3Q5RHP9 1530 aa36.17■■■■□ 3.38
TRIO-207ENST00000505971 CEP170Q5SW79 1584 aa36.14■■■■□ 3.38
TRIO-207ENST00000505971 ERCC6L2Q5T890 1561 aa36.05■■■■□ 3.36
TRIO-207ENST00000505971 SHROOM2Q13796 1616 aa36.02■■■■□ 3.36
TRIO-207ENST00000505971 JPH4Q96JJ6 628 aa35.8■■■■□ 3.32
TRIO-207ENST00000505971 PRG4Q92954 1404 aaPredicted RBP35.77■■■■□ 3.32
TRIO-207ENST00000505971 IGF1RP08069 1367 aa35.76■■■■□ 3.32
TRIO-207ENST00000505971 RUSC2Q8N2Y8 1516 aa35.73■■■■□ 3.31
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms