RNA–Protein interactions for RNA: ENST00000505945.1

SIL1-208, Transcript of SIL1 nucleotide exchange factor, humanhuman

TSL 1 (best)

Gene SIL1, Length 250 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIL1-208ENST00000505945 NISCHQ9Y2I1 1504 aa28.47■■■□□ 2.15
SIL1-208ENST00000505945 ABCC9O60706 1549 aa25.6■■□□□ 1.69
SIL1-208ENST00000505945 CCDC180Q9P1Z9 1646 aa25.48■■□□□ 1.67
SIL1-208ENST00000505945 RB1CC1Q8TDY2 1594 aa24.3■■□□□ 1.48
SIL1-208ENST00000505945 DCAF8L2P0C7V8 631 aa24.15■■□□□ 1.46
SIL1-208ENST00000505945 NACADO15069 1562 aa24.13■■□□□ 1.45
SIL1-208ENST00000505945 DNAJC5BQ9UF47 199 aa24.08■■□□□ 1.45
SIL1-208ENST00000505945 PABPN1Q86U42 306 aaKnown RBP eCLIP23.88■■□□□ 1.41
SIL1-208ENST00000505945 MYO15BQ96JP2 1530 aa23.77■■□□□ 1.4
SIL1-208ENST00000505945 UNC13AQ9UPW8 1703 aa23.75■■□□□ 1.39
SIL1-208ENST00000505945 BICRAQ9NZM4 1560 aa23.61■■□□□ 1.37
SIL1-208ENST00000505945 ZCCHC6Q5VYS8 1495 aaKnown RBP23.56■■□□□ 1.36
SIL1-208ENST00000505945 DCAF1Q9Y4B6 1507 aa23.47■■□□□ 1.35
SIL1-208ENST00000505945 SCRIBQ14160 1630 aa23.28■■□□□ 1.32
SIL1-208ENST00000505945 SHROOM4Q9ULL8 1493 aa23.23■■□□□ 1.31
SIL1-208ENST00000505945 CC2D2AQ9P2K1 1620 aa23.09■■□□□ 1.29
SIL1-208ENST00000505945 CECR2Q9BXF3 1484 aa23.05■■□□□ 1.28
SIL1-208ENST00000505945 EIF4G1Q04637 1599 aaKnown RBP23.02■■□□□ 1.28
SIL1-208ENST00000505945 NCAPD3P42695 1498 aa22.31■■□□□ 1.16
SIL1-208ENST00000505945 ATAD2BQ9ULI0 1458 aa22.24■■□□□ 1.15
SIL1-208ENST00000505945 SMARCA4P51532 1647 aa22.19■■□□□ 1.14
SIL1-208ENST00000505945 SMARCA2P51531 1590 aa22.15■■□□□ 1.14
SIL1-208ENST00000505945 DNAJC5Q9H3Z4 198 aa22.1■■□□□ 1.13
SIL1-208ENST00000505945 HMGXB3Q12766 1538 aa22.09■■□□□ 1.13
SIL1-208ENST00000505945 ERCC6Q03468 1493 aa22.09■■□□□ 1.13
SIL1-208ENST00000505945 BAZ1AQ9NRL2 1556 aaPredicted RBP22.08■■□□□ 1.12
SIL1-208ENST00000505945 BAZ1BQ9UIG0 1483 aaKnown RBP22.02■■□□□ 1.12
SIL1-208ENST00000505945 CUX2O14529 1486 aa22.01■■□□□ 1.11
SIL1-208ENST00000505945 NESP48681 1621 aa21.99■■□□□ 1.11
SIL1-208ENST00000505945 MROH2BQ7Z745 1585 aa21.95■■□□□ 1.11
SIL1-208ENST00000505945 PEG3Q9GZU2 1588 aa21.95■■□□□ 1.11
SIL1-208ENST00000505945 LAMC3Q9Y6N6 1575 aa21.78■■□□□ 1.08
SIL1-208ENST00000505945 THOC2Q8NI27 1593 aaKnown RBP21.7■■□□□ 1.06
SIL1-208ENST00000505945 WIZO95785 1651 aa21.69■■□□□ 1.06
SIL1-208ENST00000505945 PDS5BQ9NTI5 1447 aa21.68■■□□□ 1.06
SIL1-208ENST00000505945 KIF21AQ7Z4S6 1674 aa21.66■■□□□ 1.06
SIL1-208ENST00000505945 CADPSQ9ULU8 1353 aa21.64■■□□□ 1.06
SIL1-208ENST00000505945 RSF1Q96T23 1441 aaPredicted RBP21.5■■□□□ 1.03
SIL1-208ENST00000505945 MRC2Q9UBG0 1479 aa21.48■■□□□ 1.03
SIL1-208ENST00000505945 WDR62O43379 1518 aa21.41■■□□□ 1.02
SIL1-208ENST00000505945 CEP164Q9UPV0 1460 aa21.39■■□□□ 1.02
SIL1-208ENST00000505945 FANCD2Q9BXW9 1451 aa21.39■■□□□ 1.01
SIL1-208ENST00000505945 TOP2AP11388 1531 aaKnown RBP21.38■■□□□ 1.01
SIL1-208ENST00000505945 CFTRP13569 1480 aa21.38■■□□□ 1.01
SIL1-208ENST00000505945 URB2Q14146 1524 aaKnown RBP21.21■□□□□ 0.99
SIL1-208ENST00000505945 CCDC88BA6NC98 1476 aa21.18■□□□□ 0.98
SIL1-208ENST00000505945 TRIM41Q8WV44 630 aa21.14■□□□□ 0.97
SIL1-208ENST00000505945 PRDM2Q13029 1718 aa21.09■□□□□ 0.97
SIL1-208ENST00000505945 OSCARQ8IYS5 282 aa21.08■□□□□ 0.97
SIL1-208ENST00000505945 TOPBP1Q92547 1522 aa20.98■□□□□ 0.95
SIL1-208ENST00000505945 IFT140Q96RY7 1462 aa20.97■□□□□ 0.95
SIL1-208ENST00000505945 ZNF608Q9ULD9 1512 aaPredicted RBP20.97■□□□□ 0.95
SIL1-208ENST00000505945 ABCC8Q09428 1581 aa20.91■□□□□ 0.94
SIL1-208ENST00000505945 DNMBPQ6XZF7 1577 aa20.87■□□□□ 0.93
SIL1-208ENST00000505945 EIF4G3O43432 1585 aaKnown RBP20.8■□□□□ 0.92
SIL1-208ENST00000505945 AQRO60306 1485 aaKnown RBP eCLIP20.8■□□□□ 0.92
SIL1-208ENST00000505945 TARBP1Q13395 1621 aaKnown RBP20.78■□□□□ 0.92
SIL1-208ENST00000505945 POLA1P09884 1462 aaPredicted RBP20.76■□□□□ 0.91
SIL1-208ENST00000505945 RIMBP3CA6NJZ7 1639 aa20.75■□□□□ 0.91
SIL1-208ENST00000505945 RIMBP3BA6NNM3 1639 aa20.75■□□□□ 0.91
SIL1-208ENST00000505945 RIMBP3Q9UFD9 1639 aa20.75■□□□□ 0.91
SIL1-208ENST00000505945 RAD54L2Q9Y4B4 1467 aa20.72■□□□□ 0.91
SIL1-208ENST00000505945 SOGA1O94964 1423 aa20.7■□□□□ 0.9
SIL1-208ENST00000505945 FBLN2P98095 1184 aa20.7■□□□□ 0.9
SIL1-208ENST00000505945 ARHGEF11O15085 1522 aa20.69■□□□□ 0.9
SIL1-208ENST00000505945 TDRD9Q8NDG6 1382 aaKnown RBP20.68■□□□□ 0.9
SIL1-208ENST00000505945 CHD1O14646 1710 aa20.66■□□□□ 0.9
SIL1-208ENST00000505945 FGD5Q6ZNL6 1462 aa20.63■□□□□ 0.89
SIL1-208ENST00000505945 SUPT5HO00267 1087 aaKnown RBP20.62■□□□□ 0.89
SIL1-208ENST00000505945 CYB5RLQ6IPT4 315 aa20.62■□□□□ 0.89
SIL1-208ENST00000505945 CUX1P39880 1505 aa20.61■□□□□ 0.89
SIL1-208ENST00000505945 SNAPC4Q5SXM2 1469 aa20.55■□□□□ 0.88
SIL1-208ENST00000505945 CHMP7Q8WUX9 453 aaPredicted RBP20.52■□□□□ 0.88
SIL1-208ENST00000505945 WDR97A6NE52 1622 aa20.51■□□□□ 0.87
SIL1-208ENST00000505945 GRIN2BQ13224 1484 aa20.49■□□□□ 0.87
SIL1-208ENST00000505945 ARAP1Q96P48 1450 aa20.49■□□□□ 0.87
SIL1-208ENST00000505945 MAGI1Q96QZ7 1491 aaPredicted RBP20.47■□□□□ 0.87
SIL1-208ENST00000505945 GAPVD1Q14C86 1478 aa20.43■□□□□ 0.86
SIL1-208ENST00000505945 CLASP1Q7Z460 1538 aa20.43■□□□□ 0.86
SIL1-208ENST00000505945 SYNJ2O15056 1496 aa20.42■□□□□ 0.86
SIL1-208ENST00000505945 SYNJ1O43426 1573 aa20.41■□□□□ 0.86
SIL1-208ENST00000505945 TRHP20396 242 aaPredicted RBP20.39■□□□□ 0.85
SIL1-208ENST00000505945 ABCA10Q8WWZ4 1543 aa20.38■□□□□ 0.85
SIL1-208ENST00000505945 PBRM1Q86U86 1689 aa20.37■□□□□ 0.85
SIL1-208ENST00000505945 ABCA5Q8WWZ7 1642 aa20.34■□□□□ 0.85
SIL1-208ENST00000505945 WRNQ14191 1432 aaPredicted RBP eCLIP20.33■□□□□ 0.84
SIL1-208ENST00000505945 TOP2BQ02880 1626 aa20.26■□□□□ 0.83
SIL1-208ENST00000505945 BIVM-ERCC5R4GMW8 1640 aa20.24■□□□□ 0.83
SIL1-208ENST00000505945 GRIN2AQ12879 1464 aa20.23■□□□□ 0.83
SIL1-208ENST00000505945 ADAMTS12P58397 1594 aa20.18■□□□□ 0.82
SIL1-208ENST00000505945 FHAD1B1AJZ9 1412 aa20.16■□□□□ 0.82
SIL1-208ENST00000505945 NUP160Q12769 1436 aa20.15■□□□□ 0.82
SIL1-208ENST00000505945 CEP170Q5SW79 1584 aa20.15■□□□□ 0.82
SIL1-208ENST00000505945 ERCC6L2Q5T890 1561 aa20.15■□□□□ 0.82
SIL1-208ENST00000505945 ERICH3Q5RHP9 1530 aa20.12■□□□□ 0.81
SIL1-208ENST00000505945 SHROOM2Q13796 1616 aa20.04■□□□□ 0.8
SIL1-208ENST00000505945 JPH4Q96JJ6 628 aa20.01■□□□□ 0.79
SIL1-208ENST00000505945 PRG4Q92954 1404 aaPredicted RBP20■□□□□ 0.79
SIL1-208ENST00000505945 IGF1RP08069 1367 aa19.92■□□□□ 0.78
SIL1-208ENST00000505945 KIF27Q86VH2 1401 aa19.89■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 159.7 ms