RNA–Protein interactions for RNA: ENST00000505934.5

SNX2-203, Transcript of sorting nexin 2, humanhuman

TSL 2

Gene SNX2, Length 819 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX2-203ENST00000505934 NISCHQ9Y2I1 1504 aa37.26■■■■□ 3.56
SNX2-203ENST00000505934 CCDC180Q9P1Z9 1646 aa33.33■■■□□ 2.93
SNX2-203ENST00000505934 ABCC9O60706 1549 aa32.84■■■□□ 2.85
SNX2-203ENST00000505934 RB1CC1Q8TDY2 1594 aa31.5■■■□□ 2.63
SNX2-203ENST00000505934 NACADO15069 1562 aa31.41■■■□□ 2.62
SNX2-203ENST00000505934 MYO15BQ96JP2 1530 aa31.2■■■□□ 2.59
SNX2-203ENST00000505934 DCAF8L2P0C7V8 631 aa31.05■■■□□ 2.56
SNX2-203ENST00000505934 ZCCHC6Q5VYS8 1495 aaKnown RBP30.98■■■□□ 2.55
SNX2-203ENST00000505934 DCAF1Q9Y4B6 1507 aa30.89■■■□□ 2.54
SNX2-203ENST00000505934 UNC13AQ9UPW8 1703 aa30.79■■■□□ 2.52
SNX2-203ENST00000505934 BICRAQ9NZM4 1560 aa30.62■■■□□ 2.49
SNX2-203ENST00000505934 PABPN1Q86U42 306 aaKnown RBP eCLIP30.59■■■□□ 2.49
SNX2-203ENST00000505934 DNAJC5BQ9UF47 199 aa30.54■■■□□ 2.48
SNX2-203ENST00000505934 SHROOM4Q9ULL8 1493 aa30.32■■■□□ 2.44
SNX2-203ENST00000505934 SCRIBQ14160 1630 aa30.25■■■□□ 2.43
SNX2-203ENST00000505934 EIF4G1Q04637 1599 aaKnown RBP29.8■■■□□ 2.36
SNX2-203ENST00000505934 CC2D2AQ9P2K1 1620 aa29.75■■■□□ 2.35
SNX2-203ENST00000505934 CECR2Q9BXF3 1484 aa29.59■■■□□ 2.33
SNX2-203ENST00000505934 NCAPD3P42695 1498 aa29.01■■■□□ 2.23
SNX2-203ENST00000505934 SMARCA4P51532 1647 aa28.98■■■□□ 2.23
SNX2-203ENST00000505934 ATAD2BQ9ULI0 1458 aa28.93■■■□□ 2.22
SNX2-203ENST00000505934 BAZ1AQ9NRL2 1556 aaPredicted RBP28.9■■■□□ 2.22
SNX2-203ENST00000505934 SMARCA2P51531 1590 aa28.87■■■□□ 2.21
SNX2-203ENST00000505934 HMGXB3Q12766 1538 aa28.83■■■□□ 2.21
SNX2-203ENST00000505934 PEG3Q9GZU2 1588 aa28.79■■■□□ 2.2
SNX2-203ENST00000505934 MROH2BQ7Z745 1585 aa28.69■■■□□ 2.18
SNX2-203ENST00000505934 BAZ1BQ9UIG0 1483 aaKnown RBP28.62■■■□□ 2.17
SNX2-203ENST00000505934 NESP48681 1621 aa28.34■■■□□ 2.13
SNX2-203ENST00000505934 WIZO95785 1651 aa28.33■■■□□ 2.13
SNX2-203ENST00000505934 ERCC6Q03468 1493 aa28.31■■■□□ 2.12
SNX2-203ENST00000505934 LAMC3Q9Y6N6 1575 aa28.28■■■□□ 2.12
SNX2-203ENST00000505934 CUX2O14529 1486 aa28.27■■■□□ 2.12
SNX2-203ENST00000505934 RSF1Q96T23 1441 aaPredicted RBP28.24■■■□□ 2.11
SNX2-203ENST00000505934 CADPSQ9ULU8 1353 aa28.1■■■□□ 2.09
SNX2-203ENST00000505934 PDS5BQ9NTI5 1447 aa28.06■■■□□ 2.08
SNX2-203ENST00000505934 THOC2Q8NI27 1593 aaKnown RBP28.06■■■□□ 2.08
SNX2-203ENST00000505934 TOP2AP11388 1531 aaKnown RBP28.04■■■□□ 2.08
SNX2-203ENST00000505934 KIF21AQ7Z4S6 1674 aa28■■■□□ 2.07
SNX2-203ENST00000505934 CFTRP13569 1480 aa27.89■■■□□ 2.05
SNX2-203ENST00000505934 DNAJC5Q9H3Z4 198 aa27.82■■■□□ 2.04
SNX2-203ENST00000505934 MRC2Q9UBG0 1479 aa27.8■■■□□ 2.04
SNX2-203ENST00000505934 WDR62O43379 1518 aa27.77■■■□□ 2.04
SNX2-203ENST00000505934 FANCD2Q9BXW9 1451 aa27.75■■■□□ 2.03
SNX2-203ENST00000505934 CEP164Q9UPV0 1460 aa27.74■■■□□ 2.03
SNX2-203ENST00000505934 CCDC88BA6NC98 1476 aa27.7■■■□□ 2.02
SNX2-203ENST00000505934 PRDM2Q13029 1718 aa27.61■■■□□ 2.01
SNX2-203ENST00000505934 URB2Q14146 1524 aaKnown RBP27.51■■■□□ 2
SNX2-203ENST00000505934 TOPBP1Q92547 1522 aa27.28■■□□□ 1.96
SNX2-203ENST00000505934 ABCC8Q09428 1581 aa27.27■■□□□ 1.96
SNX2-203ENST00000505934 DNMBPQ6XZF7 1577 aa27.22■■□□□ 1.95
SNX2-203ENST00000505934 IFT140Q96RY7 1462 aa27.2■■□□□ 1.95
SNX2-203ENST00000505934 ZNF608Q9ULD9 1512 aaPredicted RBP27.09■■□□□ 1.93
SNX2-203ENST00000505934 SUPT5HO00267 1087 aaKnown RBP27.05■■□□□ 1.92
SNX2-203ENST00000505934 TARBP1Q13395 1621 aaKnown RBP27.05■■□□□ 1.92
SNX2-203ENST00000505934 POLA1P09884 1462 aaPredicted RBP27.03■■□□□ 1.92
SNX2-203ENST00000505934 EIF4G3O43432 1585 aaKnown RBP26.97■■□□□ 1.91
SNX2-203ENST00000505934 OSCARQ8IYS5 282 aa26.96■■□□□ 1.91
SNX2-203ENST00000505934 CUX1P39880 1505 aa26.94■■□□□ 1.9
SNX2-203ENST00000505934 FGD5Q6ZNL6 1462 aa26.88■■□□□ 1.89
SNX2-203ENST00000505934 AQRO60306 1485 aaKnown RBP eCLIP26.87■■□□□ 1.896e-6■■■■□ 25.1
SNX2-203ENST00000505934 SOGA1O94964 1423 aa26.87■■□□□ 1.89
SNX2-203ENST00000505934 RAD54L2Q9Y4B4 1467 aa26.87■■□□□ 1.89
SNX2-203ENST00000505934 WDR97A6NE52 1622 aa26.85■■□□□ 1.89
SNX2-203ENST00000505934 TDRD9Q8NDG6 1382 aaKnown RBP26.74■■□□□ 1.87
SNX2-203ENST00000505934 CHD1O14646 1710 aa26.68■■□□□ 1.86
SNX2-203ENST00000505934 ABCA10Q8WWZ4 1543 aa26.65■■□□□ 1.86
SNX2-203ENST00000505934 GRIN2BQ13224 1484 aa26.63■■□□□ 1.85
SNX2-203ENST00000505934 BIVM-ERCC5R4GMW8 1640 aa26.63■■□□□ 1.85
SNX2-203ENST00000505934 TOP2BQ02880 1626 aa26.62■■□□□ 1.85
SNX2-203ENST00000505934 SNAPC4Q5SXM2 1469 aa26.62■■□□□ 1.85
SNX2-203ENST00000505934 MAGI1Q96QZ7 1491 aaPredicted RBP26.62■■□□□ 1.85
SNX2-203ENST00000505934 WRNQ14191 1432 aaPredicted RBP eCLIP26.59■■□□□ 1.85
SNX2-203ENST00000505934 RIMBP3CA6NJZ7 1639 aa26.59■■□□□ 1.85
SNX2-203ENST00000505934 RIMBP3BA6NNM3 1639 aa26.59■■□□□ 1.85
SNX2-203ENST00000505934 RIMBP3Q9UFD9 1639 aa26.59■■□□□ 1.85
SNX2-203ENST00000505934 ABCA5Q8WWZ7 1642 aa26.58■■□□□ 1.85
SNX2-203ENST00000505934 GAPVD1Q14C86 1478 aa26.57■■□□□ 1.84
SNX2-203ENST00000505934 TRIM41Q8WV44 630 aa26.57■■□□□ 1.84
SNX2-203ENST00000505934 ARHGEF11O15085 1522 aa26.56■■□□□ 1.84
SNX2-203ENST00000505934 SYNJ1O43426 1573 aa26.56■■□□□ 1.84
SNX2-203ENST00000505934 PBRM1Q86U86 1689 aa26.53■■□□□ 1.84
SNX2-203ENST00000505934 SYNJ2O15056 1496 aa26.51■■□□□ 1.83
SNX2-203ENST00000505934 FBLN2P98095 1184 aa26.5■■□□□ 1.83
SNX2-203ENST00000505934 CLASP1Q7Z460 1538 aa26.46■■□□□ 1.83
SNX2-203ENST00000505934 CHMP7Q8WUX9 453 aaPredicted RBP26.44■■□□□ 1.82
SNX2-203ENST00000505934 ERICH3Q5RHP9 1530 aa26.33■■□□□ 1.81
SNX2-203ENST00000505934 ADAMTS12P58397 1594 aa26.33■■□□□ 1.8
SNX2-203ENST00000505934 ARAP1Q96P48 1450 aa26.32■■□□□ 1.8
SNX2-203ENST00000505934 GRIN2AQ12879 1464 aa26.29■■□□□ 1.8
SNX2-203ENST00000505934 FHAD1B1AJZ9 1412 aa26.27■■□□□ 1.8
SNX2-203ENST00000505934 CYB5RLQ6IPT4 315 aa26.24■■□□□ 1.79
SNX2-203ENST00000505934 NUP160Q12769 1436 aa26.23■■□□□ 1.79
SNX2-203ENST00000505934 CEP170Q5SW79 1584 aa26.17■■□□□ 1.78
SNX2-203ENST00000505934 SHROOM2Q13796 1616 aa26.09■■□□□ 1.77
SNX2-203ENST00000505934 KIF27Q86VH2 1401 aa26.06■■□□□ 1.76
SNX2-203ENST00000505934 IGF1RP08069 1367 aa26.05■■□□□ 1.76
SNX2-203ENST00000505934 ERCC6L2Q5T890 1561 aa26.01■■□□□ 1.75
SNX2-203ENST00000505934 CUL7Q14999 1698 aa25.99■■□□□ 1.75
SNX2-203ENST00000505934 RUSC2Q8N2Y8 1516 aa25.95■■□□□ 1.74
SNX2-203ENST00000505934 JPH4Q96JJ6 628 aa25.88■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms