RNA–Protein interactions for RNA: ENST00000505897.5

PDK2-206, Transcript of pyruvate dehydrogenase kinase 2, humanhuman

TSL 2

Gene PDK2, Length 865 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDK2-206ENST00000505897 NISCHQ9Y2I1 1504 aa69.9■■■■■ 8.78
PDK2-206ENST00000505897 CCDC180Q9P1Z9 1646 aa62.51■■■■■ 7.6
PDK2-206ENST00000505897 ABCC9O60706 1549 aa61.68■■■■■ 7.46
PDK2-206ENST00000505897 RB1CC1Q8TDY2 1594 aa59.1■■■■■ 7.05
PDK2-206ENST00000505897 NACADO15069 1562 aa58.85■■■■■ 7.01
PDK2-206ENST00000505897 DCAF8L2P0C7V8 631 aa58.62■■■■■ 6.97
PDK2-206ENST00000505897 MYO15BQ96JP2 1530 aa58.26■■■■■ 6.92
PDK2-206ENST00000505897 ZCCHC6Q5VYS8 1495 aaKnown RBP58.1■■■■■ 6.89
PDK2-206ENST00000505897 UNC13AQ9UPW8 1703 aa57.9■■■■■ 6.86
PDK2-206ENST00000505897 DCAF1Q9Y4B6 1507 aa57.8■■■■■ 6.84
PDK2-206ENST00000505897 PABPN1Q86U42 306 aaKnown RBP eCLIP57.48■■■■■ 6.79
PDK2-206ENST00000505897 BICRAQ9NZM4 1560 aa57.33■■■■■ 6.77
PDK2-206ENST00000505897 DNAJC5BQ9UF47 199 aa57.11■■■■■ 6.73
PDK2-206ENST00000505897 SCRIBQ14160 1630 aa56.96■■■■■ 6.71
PDK2-206ENST00000505897 SHROOM4Q9ULL8 1493 aa56.62■■■■■ 6.65
PDK2-206ENST00000505897 EIF4G1Q04637 1599 aaKnown RBP55.86■■■■■ 6.53
PDK2-206ENST00000505897 CC2D2AQ9P2K1 1620 aa55.81■■■■■ 6.52
PDK2-206ENST00000505897 CECR2Q9BXF3 1484 aa55.48■■■■■ 6.47
PDK2-206ENST00000505897 SMARCA4P51532 1647 aa54.42■■■■■ 6.3
PDK2-206ENST00000505897 NCAPD3P42695 1498 aa54.26■■■■■ 6.28
PDK2-206ENST00000505897 BAZ1AQ9NRL2 1556 aaPredicted RBP54.24■■■■■ 6.27
PDK2-206ENST00000505897 ATAD2BQ9ULI0 1458 aa54.22■■■■■ 6.27
PDK2-206ENST00000505897 SMARCA2P51531 1590 aa54.15■■■■■ 6.26
PDK2-206ENST00000505897 HMGXB3Q12766 1538 aa53.98■■■■■ 6.23
PDK2-206ENST00000505897 MROH2BQ7Z745 1585 aa53.87■■■■■ 6.21
PDK2-206ENST00000505897 PEG3Q9GZU2 1588 aa53.87■■■■■ 6.21
PDK2-206ENST00000505897 BAZ1BQ9UIG0 1483 aaKnown RBP53.76■■■■■ 6.2
PDK2-206ENST00000505897 WIZO95785 1651 aa53.33■■■■■ 6.13
PDK2-206ENST00000505897 ERCC6Q03468 1493 aa53.2■■■■■ 6.11
PDK2-206ENST00000505897 NESP48681 1621 aa53.2■■■■■ 6.11
PDK2-206ENST00000505897 LAMC3Q9Y6N6 1575 aa53■■■■■ 6.07
PDK2-206ENST00000505897 RSF1Q96T23 1441 aaPredicted RBP52.99■■■■■ 6.07
PDK2-206ENST00000505897 CUX2O14529 1486 aa52.85■■■■■ 6.05
PDK2-206ENST00000505897 TOP2AP11388 1531 aaKnown RBP52.67■■■■■ 6.02
PDK2-206ENST00000505897 KIF21AQ7Z4S6 1674 aa52.67■■■■■ 6.02
PDK2-206ENST00000505897 CADPSQ9ULU8 1353 aa52.63■■■■■ 6.02
PDK2-206ENST00000505897 PDS5BQ9NTI5 1447 aa52.59■■■■■ 6.01
PDK2-206ENST00000505897 THOC2Q8NI27 1593 aaKnown RBP52.57■■■■■ 6.01
PDK2-206ENST00000505897 CFTRP13569 1480 aa52.22■■■■■ 5.95
PDK2-206ENST00000505897 MRC2Q9UBG0 1479 aa52.12■■■■■ 5.93
PDK2-206ENST00000505897 CEP164Q9UPV0 1460 aa52.08■■■■■ 5.93
PDK2-206ENST00000505897 FANCD2Q9BXW9 1451 aa52.07■■■■■ 5.93
PDK2-206ENST00000505897 CCDC88BA6NC98 1476 aa52.03■■■■■ 5.92
PDK2-206ENST00000505897 WDR62O43379 1518 aa51.99■■■■■ 5.91
PDK2-206ENST00000505897 PRDM2Q13029 1718 aa51.98■■■■■ 5.91
PDK2-206ENST00000505897 DNAJC5Q9H3Z4 198 aa51.91■■■■■ 5.9
PDK2-206ENST00000505897 URB2Q14146 1524 aaKnown RBP51.6■■■■■ 5.85
PDK2-206ENST00000505897 TOPBP1Q92547 1522 aa51.18■■■■■ 5.78
PDK2-206ENST00000505897 SUPT5HO00267 1087 aaKnown RBP51.18■■■■■ 5.78
PDK2-206ENST00000505897 ABCC8Q09428 1581 aa51.13■■■■■ 5.78
PDK2-206ENST00000505897 DNMBPQ6XZF7 1577 aa51.1■■■■■ 5.77
PDK2-206ENST00000505897 IFT140Q96RY7 1462 aa50.99■■■■■ 5.75
PDK2-206ENST00000505897 ZNF608Q9ULD9 1512 aaPredicted RBP50.83■■■■■ 5.73
PDK2-206ENST00000505897 TARBP1Q13395 1621 aaKnown RBP50.72■■■■■ 5.71
PDK2-206ENST00000505897 POLA1P09884 1462 aaPredicted RBP50.7■■■■■ 5.71
PDK2-206ENST00000505897 EIF4G3O43432 1585 aaKnown RBP50.67■■■■■ 5.7
PDK2-206ENST00000505897 CUX1P39880 1505 aa50.58■■■■■ 5.69
PDK2-206ENST00000505897 OSCARQ8IYS5 282 aa50.51■■■■■ 5.68
PDK2-206ENST00000505897 FGD5Q6ZNL6 1462 aa50.5■■■■■ 5.67
PDK2-206ENST00000505897 RAD54L2Q9Y4B4 1467 aa50.49■■■■■ 5.67
PDK2-206ENST00000505897 AQRO60306 1485 aaKnown RBP eCLIP50.46■■■■■ 5.67
PDK2-206ENST00000505897 SOGA1O94964 1423 aa50.45■■■■■ 5.67
PDK2-206ENST00000505897 WDR97A6NE52 1622 aa50.27■■■■■ 5.64
PDK2-206ENST00000505897 TDRD9Q8NDG6 1382 aaKnown RBP50.25■■■■■ 5.63
PDK2-206ENST00000505897 CHD1O14646 1710 aa50.22■■■■■ 5.63
PDK2-206ENST00000505897 BIVM-ERCC5R4GMW8 1640 aa50.04■■■■■ 5.6
PDK2-206ENST00000505897 TOP2BQ02880 1626 aa50.01■■■■■ 5.6
PDK2-206ENST00000505897 WRNQ14191 1432 aaPredicted RBP eCLIP49.99■■■■■ 5.59
PDK2-206ENST00000505897 SNAPC4Q5SXM2 1469 aa49.99■■■■■ 5.59
PDK2-206ENST00000505897 SYNJ1O43426 1573 aa49.97■■■■■ 5.59
PDK2-206ENST00000505897 TRIM41Q8WV44 630 aa49.97■■■■■ 5.59
PDK2-206ENST00000505897 ABCA10Q8WWZ4 1543 aa49.96■■■■■ 5.59
PDK2-206ENST00000505897 FBLN2P98095 1184 aa49.96■■■■■ 5.59
PDK2-206ENST00000505897 PBRM1Q86U86 1689 aa49.96■■■■■ 5.59
PDK2-206ENST00000505897 GRIN2BQ13224 1484 aa49.95■■■■■ 5.59
PDK2-206ENST00000505897 RIMBP3CA6NJZ7 1639 aa49.89■■■■■ 5.58
PDK2-206ENST00000505897 RIMBP3BA6NNM3 1639 aa49.89■■■■■ 5.58
PDK2-206ENST00000505897 RIMBP3Q9UFD9 1639 aa49.89■■■■■ 5.58
PDK2-206ENST00000505897 MAGI1Q96QZ7 1491 aaPredicted RBP49.89■■■■■ 5.58
PDK2-206ENST00000505897 ABCA5Q8WWZ7 1642 aa49.89■■■■■ 5.58
PDK2-206ENST00000505897 GAPVD1Q14C86 1478 aa49.88■■■■■ 5.58
PDK2-206ENST00000505897 ARHGEF11O15085 1522 aa49.76■■■■■ 5.56
PDK2-206ENST00000505897 SYNJ2O15056 1496 aa49.71■■■■■ 5.55
PDK2-206ENST00000505897 CHMP7Q8WUX9 453 aaPredicted RBP49.71■■■■■ 5.55
PDK2-206ENST00000505897 CLASP1Q7Z460 1538 aa49.56■■■■■ 5.52
PDK2-206ENST00000505897 ADAMTS12P58397 1594 aa49.45■■■■■ 5.51
PDK2-206ENST00000505897 ERICH3Q5RHP9 1530 aa49.37■■■■■ 5.49
PDK2-206ENST00000505897 GRIN2AQ12879 1464 aa49.33■■■■■ 5.49
PDK2-206ENST00000505897 ARAP1Q96P48 1450 aa49.31■■■■■ 5.48
PDK2-206ENST00000505897 CYB5RLQ6IPT4 315 aa49.29■■■■■ 5.48
PDK2-206ENST00000505897 FHAD1B1AJZ9 1412 aa49.26■■■■■ 5.48
PDK2-206ENST00000505897 CEP170Q5SW79 1584 aa49.15■■■■■ 5.46
PDK2-206ENST00000505897 NUP160Q12769 1436 aa49.11■■■■■ 5.45
PDK2-206ENST00000505897 KIF27Q86VH2 1401 aa48.99■■■■■ 5.43
PDK2-206ENST00000505897 SHROOM2Q13796 1616 aa48.89■■■■■ 5.42
PDK2-206ENST00000505897 CUL7Q14999 1698 aa48.86■■■■■ 5.41
PDK2-206ENST00000505897 IGF1RP08069 1367 aa48.84■■■■■ 5.41
PDK2-206ENST00000505897 ERCC6L2Q5T890 1561 aa48.84■■■■■ 5.41
PDK2-206ENST00000505897 RUSC2Q8N2Y8 1516 aa48.73■■■■■ 5.39
PDK2-206ENST00000505897 PRG4Q92954 1404 aaPredicted RBP48.58■■■■■ 5.37
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms