RNA–Protein interactions for RNA: ENST00000505883.1

MBD4-205, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

TSL 3

Gene MBD4, Length 613 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-205ENST00000505883 NISCHQ9Y2I1 1504 aa39.95■■■■□ 3.99
MBD4-205ENST00000505883 CCDC180Q9P1Z9 1646 aa35.44■■■■□ 3.26
MBD4-205ENST00000505883 ABCC9O60706 1549 aa34.86■■■■□ 3.17
MBD4-205ENST00000505883 DCAF8L2P0C7V8 631 aa33.51■■■□□ 2.95
MBD4-205ENST00000505883 RB1CC1Q8TDY2 1594 aa33.44■■■□□ 2.94
MBD4-205ENST00000505883 NACADO15069 1562 aa33.39■■■□□ 2.94
MBD4-205ENST00000505883 ZCCHC6Q5VYS8 1495 aaKnown RBP33.25■■■□□ 2.91
MBD4-205ENST00000505883 MYO15BQ96JP2 1530 aa33.16■■■□□ 2.9
MBD4-205ENST00000505883 DCAF1Q9Y4B6 1507 aa33.01■■■□□ 2.87
MBD4-205ENST00000505883 AEBP2Q6ZN18 517 aaPredicted RBP32.8■■■□□ 2.84
MBD4-205ENST00000505883 PABPN1Q86U42 306 aaKnown RBP eCLIP32.63■■■□□ 2.81
MBD4-205ENST00000505883 UNC13AQ9UPW8 1703 aa32.61■■■□□ 2.81
MBD4-205ENST00000505883 BICRAQ9NZM4 1560 aa32.45■■■□□ 2.79
MBD4-205ENST00000505883 SCRIBQ14160 1630 aa32.41■■■□□ 2.78
MBD4-205ENST00000505883 DNAJC5BQ9UF47 199 aa32.12■■■□□ 2.73
MBD4-205ENST00000505883 CHIC1Q5VXU3 224 aa32.11■■■□□ 2.73
MBD4-205ENST00000505883 SHROOM4Q9ULL8 1493 aa32.05■■■□□ 2.72
MBD4-205ENST00000505883 EIF4G1Q04637 1599 aaKnown RBP31.6■■■□□ 2.65
MBD4-205ENST00000505883 CC2D2AQ9P2K1 1620 aa31.48■■■□□ 2.63
MBD4-205ENST00000505883 CECR2Q9BXF3 1484 aa31.32■■■□□ 2.6
MBD4-205ENST00000505883 SMARCA4P51532 1647 aa30.98■■■□□ 2.55
MBD4-205ENST00000505883 BAZ1AQ9NRL2 1556 aaPredicted RBP30.94■■■□□ 2.54
MBD4-205ENST00000505883 ATAD2BQ9ULI0 1458 aa30.87■■■□□ 2.53
MBD4-205ENST00000505883 NCAPD3P42695 1498 aa30.85■■■□□ 2.53
MBD4-205ENST00000505883 MROH2BQ7Z745 1585 aa30.8■■■□□ 2.52
MBD4-205ENST00000505883 SMARCA2P51531 1590 aa30.79■■■□□ 2.52
MBD4-205ENST00000505883 PEG3Q9GZU2 1588 aa30.66■■■□□ 2.5
MBD4-205ENST00000505883 HMGXB3Q12766 1538 aa30.65■■■□□ 2.5
MBD4-205ENST00000505883 BAZ1BQ9UIG0 1483 aaKnown RBP30.6■■■□□ 2.49
MBD4-205ENST00000505883 RSF1Q96T23 1441 aaPredicted RBP30.45■■■□□ 2.46
MBD4-205ENST00000505883 WIZO95785 1651 aa30.43■■■□□ 2.46
MBD4-205ENST00000505883 NESP48681 1621 aa30.15■■■□□ 2.42
MBD4-205ENST00000505883 TOP2AP11388 1531 aaKnown RBP30.11■■■□□ 2.41
MBD4-205ENST00000505883 ERCC6Q03468 1493 aa30.04■■■□□ 2.4
MBD4-205ENST00000505883 LAMC3Q9Y6N6 1575 aa30■■■□□ 2.39
MBD4-205ENST00000505883 CADPSQ9ULU8 1353 aa29.98■■■□□ 2.39
MBD4-205ENST00000505883 PDS5BQ9NTI5 1447 aa29.85■■■□□ 2.37
MBD4-205ENST00000505883 CCDC88BA6NC98 1476 aa29.8■■■□□ 2.36
MBD4-205ENST00000505883 CFTRP13569 1480 aa29.76■■■□□ 2.35
MBD4-205ENST00000505883 KIF21AQ7Z4S6 1674 aa29.7■■■□□ 2.35
MBD4-205ENST00000505883 CUX2O14529 1486 aa29.7■■■□□ 2.35
MBD4-205ENST00000505883 SUPT5HO00267 1087 aaKnown RBP29.7■■■□□ 2.35
MBD4-205ENST00000505883 THOC2Q8NI27 1593 aaKnown RBP29.64■■■□□ 2.33
MBD4-205ENST00000505883 FANCD2Q9BXW9 1451 aa29.61■■■□□ 2.33
MBD4-205ENST00000505883 CEP164Q9UPV0 1460 aa29.56■■■□□ 2.32
MBD4-205ENST00000505883 MRC2Q9UBG0 1479 aa29.54■■■□□ 2.32
MBD4-205ENST00000505883 WDR62O43379 1518 aa29.42■■■□□ 2.3
MBD4-205ENST00000505883 PRDM2Q13029 1718 aa29.38■■■□□ 2.29
MBD4-205ENST00000505883 URB2Q14146 1524 aaKnown RBP29.33■■■□□ 2.29
MBD4-205ENST00000505883 TOPBP1Q92547 1522 aa29.13■■■□□ 2.25
MBD4-205ENST00000505883 ABCC8Q09428 1581 aa29.09■■■□□ 2.25
MBD4-205ENST00000505883 DNMBPQ6XZF7 1577 aa29.05■■■□□ 2.24
MBD4-205ENST00000505883 IFT140Q96RY7 1462 aa28.95■■■□□ 2.22
MBD4-205ENST00000505883 DNAJC5Q9H3Z4 198 aa28.93■■■□□ 2.22
MBD4-205ENST00000505883 CUX1P39880 1505 aa28.89■■■□□ 2.22
MBD4-205ENST00000505883 POLA1P09884 1462 aaPredicted RBP28.88■■■□□ 2.21
MBD4-205ENST00000505883 ZNF608Q9ULD9 1512 aaPredicted RBP28.86■■■□□ 2.21
MBD4-205ENST00000505883 FGD5Q6ZNL6 1462 aa28.8■■■□□ 2.2
MBD4-205ENST00000505883 RAD54L2Q9Y4B4 1467 aa28.79■■■□□ 2.2
MBD4-205ENST00000505883 TARBP1Q13395 1621 aaKnown RBP28.79■■■□□ 2.2
MBD4-205ENST00000505883 SOGA1O94964 1423 aa28.78■■■□□ 2.2
MBD4-205ENST00000505883 AQRO60306 1485 aaKnown RBP eCLIP28.71■■■□□ 2.19
MBD4-205ENST00000505883 WRNQ14191 1432 aaPredicted RBP eCLIP28.69■■■□□ 2.18
MBD4-205ENST00000505883 EIF4G3O43432 1585 aaKnown RBP28.68■■■□□ 2.18
MBD4-205ENST00000505883 TDRD9Q8NDG6 1382 aaKnown RBP28.65■■■□□ 2.18
MBD4-205ENST00000505883 SYNJ1O43426 1573 aa28.6■■■□□ 2.17
MBD4-205ENST00000505883 TOP2BQ02880 1626 aa28.59■■■□□ 2.17
MBD4-205ENST00000505883 BIVM-ERCC5R4GMW8 1640 aa28.56■■■□□ 2.16
MBD4-205ENST00000505883 OSCARQ8IYS5 282 aa28.53■■■□□ 2.16
MBD4-205ENST00000505883 ABCA10Q8WWZ4 1543 aa28.51■■■□□ 2.15
MBD4-205ENST00000505883 WDR97A6NE52 1622 aa28.51■■■□□ 2.15
MBD4-205ENST00000505883 GRIN2BQ13224 1484 aa28.43■■■□□ 2.14
MBD4-205ENST00000505883 GAPVD1Q14C86 1478 aa28.43■■■□□ 2.14
MBD4-205ENST00000505883 SNAPC4Q5SXM2 1469 aa28.4■■■□□ 2.14
MBD4-205ENST00000505883 FBLN2P98095 1184 aa28.4■■■□□ 2.14
MBD4-205ENST00000505883 PHF23Q9BUL5 403 aaPredicted RBP28.37■■■□□ 2.13
MBD4-205ENST00000505883 ABCA5Q8WWZ7 1642 aa28.36■■■□□ 2.13
MBD4-205ENST00000505883 MAGI1Q96QZ7 1491 aaPredicted RBP28.34■■■□□ 2.13
MBD4-205ENST00000505883 CHMP7Q8WUX9 453 aaPredicted RBP28.3■■■□□ 2.12
MBD4-205ENST00000505883 CHD1O14646 1710 aa28.29■■■□□ 2.12
MBD4-205ENST00000505883 PBRM1Q86U86 1689 aa28.29■■■□□ 2.12
MBD4-205ENST00000505883 SYNJ2O15056 1496 aa28.24■■■□□ 2.11
MBD4-205ENST00000505883 ERICH3Q5RHP9 1530 aa28.15■■■□□ 2.1
MBD4-205ENST00000505883 ADAMTS12P58397 1594 aa28.11■■■□□ 2.09
MBD4-205ENST00000505883 FHAD1B1AJZ9 1412 aa28.1■■■□□ 2.09
MBD4-205ENST00000505883 KIF27Q86VH2 1401 aa28.1■■■□□ 2.09
MBD4-205ENST00000505883 GRIN2AQ12879 1464 aa28.07■■■□□ 2.08
MBD4-205ENST00000505883 CLASP1Q7Z460 1538 aa28.03■■■□□ 2.08
MBD4-205ENST00000505883 IGF1RP08069 1367 aa28.03■■■□□ 2.08
MBD4-205ENST00000505883 TRIM41Q8WV44 630 aa28.03■■■□□ 2.08
MBD4-205ENST00000505883 ARHGEF11O15085 1522 aa28.02■■■□□ 2.08
MBD4-205ENST00000505883 RIMBP3CA6NJZ7 1639 aa28.01■■■□□ 2.07
MBD4-205ENST00000505883 RIMBP3BA6NNM3 1639 aa28.01■■■□□ 2.07
MBD4-205ENST00000505883 RIMBP3Q9UFD9 1639 aa28.01■■■□□ 2.07
MBD4-205ENST00000505883 NUP160Q12769 1436 aa27.94■■■□□ 2.06
MBD4-205ENST00000505883 CEP170Q5SW79 1584 aa27.91■■■□□ 2.06
MBD4-205ENST00000505883 RUSC2Q8N2Y8 1516 aa27.87■■■□□ 2.05
MBD4-205ENST00000505883 CARMIL1Q5VZK9 1371 aa27.85■■■□□ 2.05
MBD4-205ENST00000505883 CUL7Q14999 1698 aa27.84■■■□□ 2.05
MBD4-205ENST00000505883 CYB5RLQ6IPT4 315 aa27.84■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms