RNA–Protein interactions for RNA: ENST00000505853.1

KLHL3-206, Transcript of kelch like family member 3, humanhuman

TSL 2

Gene KLHL3, Length 1,570 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL3-206ENST00000505853 NISCHQ9Y2I1 1504 aa45.18■■■■■ 4.82
KLHL3-206ENST00000505853 CCDC180Q9P1Z9 1646 aa40.17■■■■■ 4.02
KLHL3-206ENST00000505853 ABCC9O60706 1549 aa39.51■■■■□ 3.91
KLHL3-206ENST00000505853 DCAF8L2P0C7V8 631 aa37.93■■■■□ 3.66
KLHL3-206ENST00000505853 RB1CC1Q8TDY2 1594 aa37.84■■■■□ 3.65
KLHL3-206ENST00000505853 NACADO15069 1562 aa37.74■■■■□ 3.63
KLHL3-206ENST00000505853 ZCCHC6Q5VYS8 1495 aaKnown RBP37.61■■■■□ 3.61
KLHL3-206ENST00000505853 MYO15BQ96JP2 1530 aa37.4■■■■□ 3.58
KLHL3-206ENST00000505853 DCAF1Q9Y4B6 1507 aa37.25■■■■□ 3.55
KLHL3-206ENST00000505853 UNC13AQ9UPW8 1703 aa37.21■■■■□ 3.55
KLHL3-206ENST00000505853 PABPN1Q86U42 306 aaKnown RBP eCLIP36.94■■■■□ 3.5
KLHL3-206ENST00000505853 BICRAQ9NZM4 1560 aa36.8■■■■□ 3.48
KLHL3-206ENST00000505853 SCRIBQ14160 1630 aa36.8■■■■□ 3.48
KLHL3-206ENST00000505853 DNAJC5BQ9UF47 199 aa36.38■■■■□ 3.41
KLHL3-206ENST00000505853 SHROOM4Q9ULL8 1493 aa36.14■■■■□ 3.38
KLHL3-206ENST00000505853 EIF4G1Q04637 1599 aaKnown RBP35.8■■■■□ 3.32
KLHL3-206ENST00000505853 CC2D2AQ9P2K1 1620 aa35.71■■■■□ 3.31
KLHL3-206ENST00000505853 CECR2Q9BXF3 1484 aa35.43■■■■□ 3.26
KLHL3-206ENST00000505853 SMARCA4P51532 1647 aa35.12■■■■□ 3.21
KLHL3-206ENST00000505853 BAZ1AQ9NRL2 1556 aaPredicted RBP34.99■■■■□ 3.19
KLHL3-206ENST00000505853 MROH2BQ7Z745 1585 aa34.9■■■■□ 3.18
KLHL3-206ENST00000505853 ATAD2BQ9ULI0 1458 aa34.9■■■■□ 3.18
KLHL3-206ENST00000505853 NCAPD3P42695 1498 aa34.83■■■■□ 3.17
KLHL3-206ENST00000505853 SMARCA2P51531 1590 aa34.8■■■■□ 3.16
KLHL3-206ENST00000505853 PEG3Q9GZU2 1588 aa34.68■■■■□ 3.14
KLHL3-206ENST00000505853 HMGXB3Q12766 1538 aa34.65■■■■□ 3.14
KLHL3-206ENST00000505853 BAZ1BQ9UIG0 1483 aaKnown RBP34.61■■■■□ 3.13
KLHL3-206ENST00000505853 WIZO95785 1651 aa34.59■■■■□ 3.13
KLHL3-206ENST00000505853 RSF1Q96T23 1441 aaPredicted RBP34.42■■■■□ 3.1
KLHL3-206ENST00000505853 NESP48681 1621 aa34.21■■■■□ 3.07
KLHL3-206ENST00000505853 TOP2AP11388 1531 aaKnown RBP34.07■■■■□ 3.04
KLHL3-206ENST00000505853 ERCC6Q03468 1493 aa33.98■■■■□ 3.03
KLHL3-206ENST00000505853 LAMC3Q9Y6N6 1575 aa33.95■■■■□ 3.02
KLHL3-206ENST00000505853 CADPSQ9ULU8 1353 aa33.83■■■■□ 3.01
KLHL3-206ENST00000505853 KIF21AQ7Z4S6 1674 aa33.82■■■■□ 3.01
KLHL3-206ENST00000505853 CCDC88BA6NC98 1476 aa33.72■■■□□ 2.99
KLHL3-206ENST00000505853 PDS5BQ9NTI5 1447 aa33.68■■■□□ 2.98
KLHL3-206ENST00000505853 SUPT5HO00267 1087 aaKnown RBP33.63■■■□□ 2.97
KLHL3-206ENST00000505853 THOC2Q8NI27 1593 aaKnown RBP33.62■■■□□ 2.97
KLHL3-206ENST00000505853 CFTRP13569 1480 aa33.62■■■□□ 2.97
KLHL3-206ENST00000505853 CUX2O14529 1486 aa33.54■■■□□ 2.96
KLHL3-206ENST00000505853 FANCD2Q9BXW9 1451 aa33.5■■■□□ 2.95
KLHL3-206ENST00000505853 PRDM2Q13029 1718 aa33.47■■■□□ 2.95
KLHL3-206ENST00000505853 CEP164Q9UPV0 1460 aa33.44■■■□□ 2.94
KLHL3-206ENST00000505853 MRC2Q9UBG0 1479 aa33.39■■■□□ 2.94
KLHL3-206ENST00000505853 WDR62O43379 1518 aa33.29■■■□□ 2.92
KLHL3-206ENST00000505853 URB2Q14146 1524 aaKnown RBP33.21■■■□□ 2.91
KLHL3-206ENST00000505853 TOPBP1Q92547 1522 aa32.96■■■□□ 2.87
KLHL3-206ENST00000505853 DNMBPQ6XZF7 1577 aa32.9■■■□□ 2.86
KLHL3-206ENST00000505853 ABCC8Q09428 1581 aa32.82■■■□□ 2.84
KLHL3-206ENST00000505853 CUX1P39880 1505 aa32.73■■■□□ 2.83
KLHL3-206ENST00000505853 ZNF608Q9ULD9 1512 aaPredicted RBP32.7■■■□□ 2.83
KLHL3-206ENST00000505853 IFT140Q96RY7 1462 aa32.7■■■□□ 2.83
KLHL3-206ENST00000505853 POLA1P09884 1462 aaPredicted RBP32.69■■■□□ 2.82
KLHL3-206ENST00000505853 DNAJC5Q9H3Z4 198 aa32.67■■■□□ 2.82
KLHL3-206ENST00000505853 TARBP1Q13395 1621 aaKnown RBP32.64■■■□□ 2.82
KLHL3-206ENST00000505853 FGD5Q6ZNL6 1462 aa32.62■■■□□ 2.81
KLHL3-206ENST00000505853 RAD54L2Q9Y4B4 1467 aa32.61■■■□□ 2.81
KLHL3-206ENST00000505853 EIF4G3O43432 1585 aaKnown RBP32.55■■■□□ 2.8
KLHL3-206ENST00000505853 SOGA1O94964 1423 aa32.53■■■□□ 2.8
KLHL3-206ENST00000505853 AQRO60306 1485 aaKnown RBP eCLIP32.5■■■□□ 2.79
KLHL3-206ENST00000505853 SYNJ1O43426 1573 aa32.46■■■□□ 2.79
KLHL3-206ENST00000505853 WRNQ14191 1432 aaPredicted RBP eCLIP32.43■■■□□ 2.78
KLHL3-206ENST00000505853 TDRD9Q8NDG6 1382 aaKnown RBP32.42■■■□□ 2.78
KLHL3-206ENST00000505853 BIVM-ERCC5R4GMW8 1640 aa32.4■■■□□ 2.78
KLHL3-206ENST00000505853 TOP2BQ02880 1626 aa32.39■■■□□ 2.78
KLHL3-206ENST00000505853 WDR97A6NE52 1622 aa32.37■■■□□ 2.77
KLHL3-206ENST00000505853 CHD1O14646 1710 aa32.22■■■□□ 2.75
KLHL3-206ENST00000505853 ABCA10Q8WWZ4 1543 aa32.22■■■□□ 2.75
KLHL3-206ENST00000505853 OSCARQ8IYS5 282 aa32.2■■■□□ 2.75
KLHL3-206ENST00000505853 PBRM1Q86U86 1689 aa32.18■■■□□ 2.74
KLHL3-206ENST00000505853 ABCA5Q8WWZ7 1642 aa32.16■■■□□ 2.74
KLHL3-206ENST00000505853 GAPVD1Q14C86 1478 aa32.15■■■□□ 2.74
KLHL3-206ENST00000505853 SNAPC4Q5SXM2 1469 aa32.15■■■□□ 2.74
KLHL3-206ENST00000505853 FBLN2P98095 1184 aa32.14■■■□□ 2.74
KLHL3-206ENST00000505853 GRIN2BQ13224 1484 aa32.12■■■□□ 2.73
KLHL3-206ENST00000505853 MAGI1Q96QZ7 1491 aaPredicted RBP32.02■■■□□ 2.72
KLHL3-206ENST00000505853 CHMP7Q8WUX9 453 aaPredicted RBP31.95■■■□□ 2.71
KLHL3-206ENST00000505853 SYNJ2O15056 1496 aa31.92■■■□□ 2.7
KLHL3-206ENST00000505853 ADAMTS12P58397 1594 aa31.86■■■□□ 2.69
KLHL3-206ENST00000505853 ERICH3Q5RHP9 1530 aa31.82■■■□□ 2.68
KLHL3-206ENST00000505853 RIMBP3CA6NJZ7 1639 aa31.8■■■□□ 2.68
KLHL3-206ENST00000505853 RIMBP3BA6NNM3 1639 aa31.8■■■□□ 2.68
KLHL3-206ENST00000505853 RIMBP3Q9UFD9 1639 aa31.8■■■□□ 2.68
KLHL3-206ENST00000505853 CLASP1Q7Z460 1538 aa31.74■■■□□ 2.67
KLHL3-206ENST00000505853 GRIN2AQ12879 1464 aa31.74■■■□□ 2.67
KLHL3-206ENST00000505853 ARHGEF11O15085 1522 aa31.74■■■□□ 2.67
KLHL3-206ENST00000505853 FHAD1B1AJZ9 1412 aa31.73■■■□□ 2.67
KLHL3-206ENST00000505853 KIF27Q86VH2 1401 aa31.72■■■□□ 2.67
KLHL3-206ENST00000505853 TRIM41Q8WV44 630 aa31.71■■■□□ 2.67
KLHL3-206ENST00000505853 CEP170Q5SW79 1584 aa31.65■■■□□ 2.66
KLHL3-206ENST00000505853 IGF1RP08069 1367 aa31.65■■■□□ 2.66
KLHL3-206ENST00000505853 RUSC2Q8N2Y8 1516 aa31.61■■■□□ 2.65
KLHL3-206ENST00000505853 NUP160Q12769 1436 aa31.57■■■□□ 2.64
KLHL3-206ENST00000505853 CUL7Q14999 1698 aa31.55■■■□□ 2.64
KLHL3-206ENST00000505853 CYB5RLQ6IPT4 315 aa31.49■■■□□ 2.63
KLHL3-206ENST00000505853 ARAP1Q96P48 1450 aa31.49■■■□□ 2.63
KLHL3-206ENST00000505853 CARMIL1Q5VZK9 1371 aa31.44■■■□□ 2.62
KLHL3-206ENST00000505853 ERCC6L2Q5T890 1561 aa31.44■■■□□ 2.62
KLHL3-206ENST00000505853 SHROOM2Q13796 1616 aa31.38■■■□□ 2.61
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms