RNA–Protein interactions for RNA: ENST00000505617.5

APBB3-210, Transcript of amyloid beta precursor protein binding family B member 3, humanhuman

TSL 4

Gene APBB3, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APBB3-210ENST00000505617 NISCHQ9Y2I1 1504 aa37.94■■■■□ 3.66
APBB3-210ENST00000505617 CCDC180Q9P1Z9 1646 aa34.11■■■■□ 3.05
APBB3-210ENST00000505617 ABCC9O60706 1549 aa33.85■■■■□ 3.01
APBB3-210ENST00000505617 RB1CC1Q8TDY2 1594 aa32.33■■■□□ 2.77
APBB3-210ENST00000505617 NACADO15069 1562 aa32.13■■■□□ 2.73
APBB3-210ENST00000505617 DCAF8L2P0C7V8 631 aa31.84■■■□□ 2.69
APBB3-210ENST00000505617 MYO15BQ96JP2 1530 aa31.72■■■□□ 2.67
APBB3-210ENST00000505617 UNC13AQ9UPW8 1703 aa31.69■■■□□ 2.66
APBB3-210ENST00000505617 ZCCHC6Q5VYS8 1495 aaKnown RBP31.52■■■□□ 2.64
APBB3-210ENST00000505617 DNAJC5BQ9UF47 199 aa31.49■■■□□ 2.63
APBB3-210ENST00000505617 PABPN1Q86U42 306 aaKnown RBP eCLIP31.44■■■□□ 2.62
APBB3-210ENST00000505617 DCAF1Q9Y4B6 1507 aa31.38■■■□□ 2.61
APBB3-210ENST00000505617 BICRAQ9NZM4 1560 aa31.37■■■□□ 2.61
APBB3-210ENST00000505617 SCRIBQ14160 1630 aa31.05■■■□□ 2.56
APBB3-210ENST00000505617 SHROOM4Q9ULL8 1493 aa31■■■□□ 2.55
APBB3-210ENST00000505617 CC2D2AQ9P2K1 1620 aa30.62■■■□□ 2.49
APBB3-210ENST00000505617 EIF4G1Q04637 1599 aaKnown RBP30.6■■■□□ 2.49
APBB3-210ENST00000505617 CECR2Q9BXF3 1484 aa30.48■■■□□ 2.47
APBB3-210ENST00000505617 SMARCA4P51532 1647 aa29.63■■■□□ 2.33
APBB3-210ENST00000505617 NCAPD3P42695 1498 aa29.6■■■□□ 2.33
APBB3-210ENST00000505617 ATAD2BQ9ULI0 1458 aa29.55■■■□□ 2.32
APBB3-210ENST00000505617 SMARCA2P51531 1590 aa29.53■■■□□ 2.32
APBB3-210ENST00000505617 BAZ1AQ9NRL2 1556 aaPredicted RBP29.48■■■□□ 2.31
APBB3-210ENST00000505617 HMGXB3Q12766 1538 aa29.48■■■□□ 2.31
APBB3-210ENST00000505617 PEG3Q9GZU2 1588 aa29.33■■■□□ 2.29
APBB3-210ENST00000505617 BAZ1BQ9UIG0 1483 aaKnown RBP29.3■■■□□ 2.28
APBB3-210ENST00000505617 ERCC6Q03468 1493 aa29.24■■■□□ 2.27
APBB3-210ENST00000505617 MROH2BQ7Z745 1585 aa29.24■■■□□ 2.27
APBB3-210ENST00000505617 CUX2O14529 1486 aa29.14■■■□□ 2.26
APBB3-210ENST00000505617 NESP48681 1621 aa29.12■■■□□ 2.25
APBB3-210ENST00000505617 LAMC3Q9Y6N6 1575 aa28.99■■■□□ 2.23
APBB3-210ENST00000505617 WIZO95785 1651 aa28.93■■■□□ 2.22
APBB3-210ENST00000505617 THOC2Q8NI27 1593 aaKnown RBP28.88■■■□□ 2.21
APBB3-210ENST00000505617 KIF21AQ7Z4S6 1674 aa28.85■■■□□ 2.21
APBB3-210ENST00000505617 DNAJC5Q9H3Z4 198 aa28.83■■■□□ 2.21
APBB3-210ENST00000505617 PDS5BQ9NTI5 1447 aa28.75■■■□□ 2.19
APBB3-210ENST00000505617 CADPSQ9ULU8 1353 aa28.69■■■□□ 2.18
APBB3-210ENST00000505617 RSF1Q96T23 1441 aaPredicted RBP28.64■■■□□ 2.18
APBB3-210ENST00000505617 TOP2AP11388 1531 aaKnown RBP28.59■■■□□ 2.17
APBB3-210ENST00000505617 MRC2Q9UBG0 1479 aa28.53■■■□□ 2.16
APBB3-210ENST00000505617 WDR62O43379 1518 aa28.48■■■□□ 2.15
APBB3-210ENST00000505617 CEP164Q9UPV0 1460 aa28.46■■■□□ 2.15
APBB3-210ENST00000505617 CFTRP13569 1480 aa28.43■■■□□ 2.14
APBB3-210ENST00000505617 FANCD2Q9BXW9 1451 aa28.41■■■□□ 2.14
APBB3-210ENST00000505617 PRDM2Q13029 1718 aa28.34■■■□□ 2.13
APBB3-210ENST00000505617 CCDC88BA6NC98 1476 aa28.19■■■□□ 2.1
APBB3-210ENST00000505617 URB2Q14146 1524 aaKnown RBP28.18■■■□□ 2.1
APBB3-210ENST00000505617 TOPBP1Q92547 1522 aa27.91■■■□□ 2.06
APBB3-210ENST00000505617 IFT140Q96RY7 1462 aa27.86■■■□□ 2.05
APBB3-210ENST00000505617 DNMBPQ6XZF7 1577 aa27.86■■■□□ 2.05
APBB3-210ENST00000505617 ABCC8Q09428 1581 aa27.83■■■□□ 2.05
APBB3-210ENST00000505617 ZNF608Q9ULD9 1512 aaPredicted RBP27.79■■■□□ 2.04
APBB3-210ENST00000505617 EIF4G3O43432 1585 aaKnown RBP27.74■■■□□ 2.03
APBB3-210ENST00000505617 OSCARQ8IYS5 282 aa27.71■■■□□ 2.03
APBB3-210ENST00000505617 TARBP1Q13395 1621 aaKnown RBP27.68■■■□□ 2.02
APBB3-210ENST00000505617 TRIM41Q8WV44 630 aa27.66■■■□□ 2.02
APBB3-210ENST00000505617 POLA1P09884 1462 aaPredicted RBP27.63■■■□□ 2.01
APBB3-210ENST00000505617 CHD1O14646 1710 aa27.53■■■□□ 2
APBB3-210ENST00000505617 AQRO60306 1485 aaKnown RBP eCLIP27.52■■■□□ 24e-6■■■■■ 31
APBB3-210ENST00000505617 RAD54L2Q9Y4B4 1467 aa27.49■■□□□ 1.99
APBB3-210ENST00000505617 RIMBP3CA6NJZ7 1639 aa27.49■■□□□ 1.99
APBB3-210ENST00000505617 RIMBP3BA6NNM3 1639 aa27.49■■□□□ 1.99
APBB3-210ENST00000505617 RIMBP3Q9UFD9 1639 aa27.49■■□□□ 1.99
APBB3-210ENST00000505617 CUX1P39880 1505 aa27.48■■□□□ 1.99
APBB3-210ENST00000505617 FGD5Q6ZNL6 1462 aa27.48■■□□□ 1.99
APBB3-210ENST00000505617 SOGA1O94964 1423 aa27.44■■□□□ 1.98
APBB3-210ENST00000505617 WDR97A6NE52 1622 aa27.44■■□□□ 1.98
APBB3-210ENST00000505617 SUPT5HO00267 1087 aaKnown RBP27.43■■□□□ 1.98
APBB3-210ENST00000505617 ARHGEF11O15085 1522 aa27.4■■□□□ 1.98
APBB3-210ENST00000505617 TDRD9Q8NDG6 1382 aaKnown RBP27.36■■□□□ 1.97
APBB3-210ENST00000505617 SNAPC4Q5SXM2 1469 aa27.31■■□□□ 1.96
APBB3-210ENST00000505617 FBLN2P98095 1184 aa27.28■■□□□ 1.96
APBB3-210ENST00000505617 PBRM1Q86U86 1689 aa27.26■■□□□ 1.95
APBB3-210ENST00000505617 MAGI1Q96QZ7 1491 aaPredicted RBP27.25■■□□□ 1.95
APBB3-210ENST00000505617 GRIN2BQ13224 1484 aa27.24■■□□□ 1.95
APBB3-210ENST00000505617 ABCA5Q8WWZ7 1642 aa27.18■■□□□ 1.94
APBB3-210ENST00000505617 ABCA10Q8WWZ4 1543 aa27.17■■□□□ 1.94
APBB3-210ENST00000505617 GAPVD1Q14C86 1478 aa27.16■■□□□ 1.94
APBB3-210ENST00000505617 SYNJ1O43426 1573 aa27.16■■□□□ 1.94
APBB3-210ENST00000505617 CLASP1Q7Z460 1538 aa27.16■■□□□ 1.94
APBB3-210ENST00000505617 SYNJ2O15056 1496 aa27.14■■□□□ 1.94
APBB3-210ENST00000505617 BIVM-ERCC5R4GMW8 1640 aa27.14■■□□□ 1.94
APBB3-210ENST00000505617 ARAP1Q96P48 1450 aa27.13■■□□□ 1.93
APBB3-210ENST00000505617 TOP2BQ02880 1626 aa27.11■■□□□ 1.93
APBB3-210ENST00000505617 CHMP7Q8WUX9 453 aaPredicted RBP27.1■■□□□ 1.93
APBB3-210ENST00000505617 WRNQ14191 1432 aaPredicted RBP eCLIP27.07■■□□□ 1.92
APBB3-210ENST00000505617 CYB5RLQ6IPT4 315 aa27.06■■□□□ 1.92
APBB3-210ENST00000505617 ADAMTS12P58397 1594 aa26.97■■□□□ 1.91
APBB3-210ENST00000505617 GRIN2AQ12879 1464 aa26.91■■□□□ 1.9
APBB3-210ENST00000505617 ERICH3Q5RHP9 1530 aa26.85■■□□□ 1.89
APBB3-210ENST00000505617 CEP170Q5SW79 1584 aa26.83■■□□□ 1.89
APBB3-210ENST00000505617 FHAD1B1AJZ9 1412 aa26.82■■□□□ 1.88
APBB3-210ENST00000505617 NUP160Q12769 1436 aa26.8■■□□□ 1.88
APBB3-210ENST00000505617 TRHP20396 242 aaPredicted RBP26.73■■□□□ 1.87
APBB3-210ENST00000505617 ERCC6L2Q5T890 1561 aa26.72■■□□□ 1.87
APBB3-210ENST00000505617 SHROOM2Q13796 1616 aa26.72■■□□□ 1.87
APBB3-210ENST00000505617 RUSC2Q8N2Y8 1516 aa26.6■■□□□ 1.85
APBB3-210ENST00000505617 CUL7Q14999 1698 aa26.55■■□□□ 1.84
APBB3-210ENST00000505617 KIF27Q86VH2 1401 aa26.53■■□□□ 1.84
APBB3-210ENST00000505617 PRG4Q92954 1404 aaPredicted RBP26.49■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms