RNA–Protein interactions for RNA: ENST00000505440.5

PDK2-205, Transcript of pyruvate dehydrogenase kinase 2, humanhuman

TSL 4

Gene PDK2, Length 615 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDK2-205ENST00000505440 NISCHQ9Y2I1 1504 aa30.76■■■□□ 2.51
PDK2-205ENST00000505440 ABCC9O60706 1549 aa27.92■■■□□ 2.06
PDK2-205ENST00000505440 CCDC180Q9P1Z9 1646 aa27.83■■■□□ 2.05
PDK2-205ENST00000505440 RB1CC1Q8TDY2 1594 aa26.53■■□□□ 1.84
PDK2-205ENST00000505440 DNAJC5BQ9UF47 199 aa26.37■■□□□ 1.81
PDK2-205ENST00000505440 NACADO15069 1562 aa26.29■■□□□ 1.8
PDK2-205ENST00000505440 UNC13AQ9UPW8 1703 aa26.1■■□□□ 1.77
PDK2-205ENST00000505440 DCAF8L2P0C7V8 631 aa25.92■■□□□ 1.74
PDK2-205ENST00000505440 PABPN1Q86U42 306 aaKnown RBP eCLIP25.87■■□□□ 1.73
PDK2-205ENST00000505440 MYO15BQ96JP2 1530 aa25.83■■□□□ 1.73
PDK2-205ENST00000505440 BICRAQ9NZM4 1560 aa25.79■■□□□ 1.72
PDK2-205ENST00000505440 ZCCHC6Q5VYS8 1495 aaKnown RBP25.46■■□□□ 1.67
PDK2-205ENST00000505440 DCAF1Q9Y4B6 1507 aa25.42■■□□□ 1.66
PDK2-205ENST00000505440 SHROOM4Q9ULL8 1493 aa25.39■■□□□ 1.65
PDK2-205ENST00000505440 CC2D2AQ9P2K1 1620 aa25.28■■□□□ 1.64
PDK2-205ENST00000505440 SCRIBQ14160 1630 aa25.26■■□□□ 1.63
PDK2-205ENST00000505440 CECR2Q9BXF3 1484 aa25.17■■□□□ 1.62
PDK2-205ENST00000505440 EIF4G1Q04637 1599 aaKnown RBP25.15■■□□□ 1.62
PDK2-205ENST00000505440 DNAJC5Q9H3Z4 198 aa24.38■■□□□ 1.49
PDK2-205ENST00000505440 NCAPD3P42695 1498 aa24.22■■□□□ 1.47
PDK2-205ENST00000505440 CUX2O14529 1486 aa24.19■■□□□ 1.46
PDK2-205ENST00000505440 ATAD2BQ9ULI0 1458 aa24.12■■□□□ 1.45
PDK2-205ENST00000505440 ERCC6Q03468 1493 aa24.1■■□□□ 1.45
PDK2-205ENST00000505440 SMARCA4P51532 1647 aa24.1■■□□□ 1.45
PDK2-205ENST00000505440 HMGXB3Q12766 1538 aa24.07■■□□□ 1.44
PDK2-205ENST00000505440 SMARCA2P51531 1590 aa24.07■■□□□ 1.44
PDK2-205ENST00000505440 NESP48681 1621 aa23.93■■□□□ 1.42
PDK2-205ENST00000505440 BAZ1AQ9NRL2 1556 aaPredicted RBP23.91■■□□□ 1.42
PDK2-205ENST00000505440 BAZ1BQ9UIG0 1483 aaKnown RBP23.87■■□□□ 1.41
PDK2-205ENST00000505440 PEG3Q9GZU2 1588 aa23.86■■□□□ 1.41
PDK2-205ENST00000505440 THOC2Q8NI27 1593 aaKnown RBP23.82■■□□□ 1.4
PDK2-205ENST00000505440 LAMC3Q9Y6N6 1575 aa23.78■■□□□ 1.4
PDK2-205ENST00000505440 KIF21AQ7Z4S6 1674 aa23.74■■□□□ 1.39
PDK2-205ENST00000505440 MROH2BQ7Z745 1585 aa23.7■■□□□ 1.38
PDK2-205ENST00000505440 PDS5BQ9NTI5 1447 aa23.56■■□□□ 1.36
PDK2-205ENST00000505440 WIZO95785 1651 aa23.46■■□□□ 1.35
PDK2-205ENST00000505440 CADPSQ9ULU8 1353 aa23.44■■□□□ 1.34
PDK2-205ENST00000505440 MRC2Q9UBG0 1479 aa23.4■■□□□ 1.34
PDK2-205ENST00000505440 WDR62O43379 1518 aa23.39■■□□□ 1.34
PDK2-205ENST00000505440 CEP164Q9UPV0 1460 aa23.26■■□□□ 1.31
PDK2-205ENST00000505440 FANCD2Q9BXW9 1451 aa23.2■■□□□ 1.3
PDK2-205ENST00000505440 TRIM41Q8WV44 630 aa23.18■■□□□ 1.3
PDK2-205ENST00000505440 CFTRP13569 1480 aa23.15■■□□□ 1.3
PDK2-205ENST00000505440 PRDM2Q13029 1718 aa23.13■■□□□ 1.29
PDK2-205ENST00000505440 TOP2AP11388 1531 aaKnown RBP23.11■■□□□ 1.29
PDK2-205ENST00000505440 RSF1Q96T23 1441 aaPredicted RBP23.08■■□□□ 1.28
PDK2-205ENST00000505440 URB2Q14146 1524 aaKnown RBP23.05■■□□□ 1.28
PDK2-205ENST00000505440 OSCARQ8IYS5 282 aa22.95■■□□□ 1.26
PDK2-205ENST00000505440 RIMBP3CA6NJZ7 1639 aa22.82■■□□□ 1.24
PDK2-205ENST00000505440 RIMBP3BA6NNM3 1639 aa22.82■■□□□ 1.24
PDK2-205ENST00000505440 RIMBP3Q9UFD9 1639 aa22.82■■□□□ 1.24
PDK2-205ENST00000505440 CCDC88BA6NC98 1476 aa22.81■■□□□ 1.24
PDK2-205ENST00000505440 IFT140Q96RY7 1462 aa22.79■■□□□ 1.24
PDK2-205ENST00000505440 ZNF608Q9ULD9 1512 aaPredicted RBP22.79■■□□□ 1.24
PDK2-205ENST00000505440 TOPBP1Q92547 1522 aa22.77■■□□□ 1.24
PDK2-205ENST00000505440 EIF4G3O43432 1585 aaKnown RBP22.72■■□□□ 1.23
PDK2-205ENST00000505440 ABCC8Q09428 1581 aa22.69■■□□□ 1.22
PDK2-205ENST00000505440 DNMBPQ6XZF7 1577 aa22.68■■□□□ 1.22
PDK2-205ENST00000505440 ARHGEF11O15085 1522 aa22.68■■□□□ 1.22
PDK2-205ENST00000505440 CHD1O14646 1710 aa22.67■■□□□ 1.22
PDK2-205ENST00000505440 TARBP1Q13395 1621 aaKnown RBP22.64■■□□□ 1.21
PDK2-205ENST00000505440 AQRO60306 1485 aaKnown RBP eCLIP22.53■■□□□ 1.2
PDK2-205ENST00000505440 POLA1P09884 1462 aaPredicted RBP22.51■■□□□ 1.19
PDK2-205ENST00000505440 ARAP1Q96P48 1450 aa22.44■■□□□ 1.18
PDK2-205ENST00000505440 CYB5RLQ6IPT4 315 aa22.43■■□□□ 1.18
PDK2-205ENST00000505440 RAD54L2Q9Y4B4 1467 aa22.41■■□□□ 1.18
PDK2-205ENST00000505440 WDR97A6NE52 1622 aa22.39■■□□□ 1.18
PDK2-205ENST00000505440 FBLN2P98095 1184 aa22.36■■□□□ 1.17
PDK2-205ENST00000505440 SOGA1O94964 1423 aa22.35■■□□□ 1.17
PDK2-205ENST00000505440 TDRD9Q8NDG6 1382 aaKnown RBP22.33■■□□□ 1.17
PDK2-205ENST00000505440 FGD5Q6ZNL6 1462 aa22.33■■□□□ 1.16
PDK2-205ENST00000505440 CLASP1Q7Z460 1538 aa22.32■■□□□ 1.16
PDK2-205ENST00000505440 SNAPC4Q5SXM2 1469 aa22.32■■□□□ 1.16
PDK2-205ENST00000505440 CUX1P39880 1505 aa22.28■■□□□ 1.16
PDK2-205ENST00000505440 SYNJ1O43426 1573 aa22.28■■□□□ 1.16
PDK2-205ENST00000505440 MAGI1Q96QZ7 1491 aaPredicted RBP22.26■■□□□ 1.15
PDK2-205ENST00000505440 PBRM1Q86U86 1689 aa22.26■■□□□ 1.15
PDK2-205ENST00000505440 TRHP20396 242 aaPredicted RBP22.25■■□□□ 1.15
PDK2-205ENST00000505440 GRIN2BQ13224 1484 aa22.22■■□□□ 1.15
PDK2-205ENST00000505440 SYNJ2O15056 1496 aa22.18■■□□□ 1.14
PDK2-205ENST00000505440 CHMP7Q8WUX9 453 aaPredicted RBP22.17■■□□□ 1.14
PDK2-205ENST00000505440 ABCA5Q8WWZ7 1642 aa22.13■■□□□ 1.13
PDK2-205ENST00000505440 GAPVD1Q14C86 1478 aa22.1■■□□□ 1.13
PDK2-205ENST00000505440 ABCA10Q8WWZ4 1543 aa22.07■■□□□ 1.12
PDK2-205ENST00000505440 ADAMTS12P58397 1594 aa21.95■■□□□ 1.11
PDK2-205ENST00000505440 GRIN2AQ12879 1464 aa21.95■■□□□ 1.1
PDK2-205ENST00000505440 ERCC6L2Q5T890 1561 aa21.95■■□□□ 1.1
PDK2-205ENST00000505440 BIVM-ERCC5R4GMW8 1640 aa21.95■■□□□ 1.1
PDK2-205ENST00000505440 CEP170Q5SW79 1584 aa21.92■■□□□ 1.1
PDK2-205ENST00000505440 SHROOM2Q13796 1616 aa21.9■■□□□ 1.1
PDK2-205ENST00000505440 TOP2BQ02880 1626 aa21.89■■□□□ 1.09
PDK2-205ENST00000505440 NUP160Q12769 1436 aa21.88■■□□□ 1.09
PDK2-205ENST00000505440 WRNQ14191 1432 aaPredicted RBP eCLIP21.88■■□□□ 1.09
PDK2-205ENST00000505440 KIF13AQ9H1H9 1805 aa21.81■■□□□ 1.08
PDK2-205ENST00000505440 FHAD1B1AJZ9 1412 aa21.8■■□□□ 1.08
PDK2-205ENST00000505440 SUPT5HO00267 1087 aaKnown RBP21.8■■□□□ 1.08
PDK2-205ENST00000505440 ERICH3Q5RHP9 1530 aa21.8■■□□□ 1.08
PDK2-205ENST00000505440 AEBP2Q6ZN18 517 aaPredicted RBP21.77■■□□□ 1.08
PDK2-205ENST00000505440 RUSC2Q8N2Y8 1516 aa21.66■■□□□ 1.06
PDK2-205ENST00000505440 PRG4Q92954 1404 aaPredicted RBP21.65■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms