RNA–Protein interactions for RNA: ENST00000505417.1

SNRPCP13-201, Transcript of small nuclear ribonucleoprotein polypeptide C pseudogene 13, humanhuman

BASIC

Gene SNRPCP13, Length 190 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPCP13-201ENST00000505417 NISCHQ9Y2I1 1504 aa24.53■■□□□ 1.52
SNRPCP13-201ENST00000505417 ABCC9O60706 1549 aa21.69■■□□□ 1.06
SNRPCP13-201ENST00000505417 CCDC180Q9P1Z9 1646 aa21.66■■□□□ 1.06
SNRPCP13-201ENST00000505417 DNAJC5BQ9UF47 199 aa21.1■□□□□ 0.97
SNRPCP13-201ENST00000505417 ZCCHC6Q5VYS8 1495 aaKnown RBP20.46■□□□□ 0.87
SNRPCP13-201ENST00000505417 MYO15BQ96JP2 1530 aa20.43■□□□□ 0.86
SNRPCP13-201ENST00000505417 NACADO15069 1562 aa20.4■□□□□ 0.86
SNRPCP13-201ENST00000505417 DCAF1Q9Y4B6 1507 aa20.37■□□□□ 0.85
SNRPCP13-201ENST00000505417 DCAF8L2P0C7V8 631 aa20.36■□□□□ 0.85
SNRPCP13-201ENST00000505417 RB1CC1Q8TDY2 1594 aa20.32■□□□□ 0.84
SNRPCP13-201ENST00000505417 PABPN1Q86U42 306 aaKnown RBP eCLIP20.09■□□□□ 0.81
SNRPCP13-201ENST00000505417 UNC13AQ9UPW8 1703 aa19.89■□□□□ 0.77
SNRPCP13-201ENST00000505417 BICRAQ9NZM4 1560 aa19.82■□□□□ 0.76
SNRPCP13-201ENST00000505417 DNAJC5Q9H3Z4 198 aa19.81■□□□□ 0.76
SNRPCP13-201ENST00000505417 SCRIBQ14160 1630 aa19.69■□□□□ 0.74
SNRPCP13-201ENST00000505417 SHROOM4Q9ULL8 1493 aa19.62■□□□□ 0.73
SNRPCP13-201ENST00000505417 CECR2Q9BXF3 1484 aa19.59■□□□□ 0.73
SNRPCP13-201ENST00000505417 CC2D2AQ9P2K1 1620 aa19.55■□□□□ 0.72
SNRPCP13-201ENST00000505417 EIF4G1Q04637 1599 aaKnown RBP19.33■□□□□ 0.69
SNRPCP13-201ENST00000505417 BAZ1AQ9NRL2 1556 aaPredicted RBP18.99■□□□□ 0.63
SNRPCP13-201ENST00000505417 CUX2O14529 1486 aa18.93■□□□□ 0.62
SNRPCP13-201ENST00000505417 SMARCA4P51532 1647 aa18.92■□□□□ 0.62
SNRPCP13-201ENST00000505417 NCAPD3P42695 1498 aa18.87■□□□□ 0.61
SNRPCP13-201ENST00000505417 MROH2BQ7Z745 1585 aa18.86■□□□□ 0.61
SNRPCP13-201ENST00000505417 ATAD2BQ9ULI0 1458 aa18.86■□□□□ 0.61
SNRPCP13-201ENST00000505417 PEG3Q9GZU2 1588 aa18.83■□□□□ 0.6
SNRPCP13-201ENST00000505417 SMARCA2P51531 1590 aa18.82■□□□□ 0.6
SNRPCP13-201ENST00000505417 RSF1Q96T23 1441 aaPredicted RBP18.78■□□□□ 0.6
SNRPCP13-201ENST00000505417 HMGXB3Q12766 1538 aa18.72■□□□□ 0.59
SNRPCP13-201ENST00000505417 ERCC6Q03468 1493 aa18.69■□□□□ 0.58
SNRPCP13-201ENST00000505417 BAZ1BQ9UIG0 1483 aaKnown RBP18.66■□□□□ 0.58
SNRPCP13-201ENST00000505417 TRIM41Q8WV44 630 aa18.61■□□□□ 0.57
SNRPCP13-201ENST00000505417 WIZO95785 1651 aa18.6■□□□□ 0.57
SNRPCP13-201ENST00000505417 TOP2AP11388 1531 aaKnown RBP18.49■□□□□ 0.55
SNRPCP13-201ENST00000505417 NESP48681 1621 aa18.47■□□□□ 0.55
SNRPCP13-201ENST00000505417 THOC2Q8NI27 1593 aaKnown RBP18.4■□□□□ 0.54
SNRPCP13-201ENST00000505417 SUPT5HO00267 1087 aaKnown RBP18.36■□□□□ 0.53
SNRPCP13-201ENST00000505417 CADPSQ9ULU8 1353 aa18.31■□□□□ 0.52
SNRPCP13-201ENST00000505417 CCDC88BA6NC98 1476 aa18.3■□□□□ 0.52
SNRPCP13-201ENST00000505417 LAMC3Q9Y6N6 1575 aa18.25■□□□□ 0.51
SNRPCP13-201ENST00000505417 CFTRP13569 1480 aa18.24■□□□□ 0.51
SNRPCP13-201ENST00000505417 PDS5BQ9NTI5 1447 aa18.18■□□□□ 0.5
SNRPCP13-201ENST00000505417 KIF21AQ7Z4S6 1674 aa18.17■□□□□ 0.5
SNRPCP13-201ENST00000505417 FANCD2Q9BXW9 1451 aa18.04■□□□□ 0.48
SNRPCP13-201ENST00000505417 CEP164Q9UPV0 1460 aa17.98■□□□□ 0.47
SNRPCP13-201ENST00000505417 MRC2Q9UBG0 1479 aa17.95■□□□□ 0.46
SNRPCP13-201ENST00000505417 WDR62O43379 1518 aa17.95■□□□□ 0.46
SNRPCP13-201ENST00000505417 OSCARQ8IYS5 282 aa17.94■□□□□ 0.46
SNRPCP13-201ENST00000505417 PRDM2Q13029 1718 aa17.9■□□□□ 0.46
SNRPCP13-201ENST00000505417 ABCC8Q09428 1581 aa17.86■□□□□ 0.45
SNRPCP13-201ENST00000505417 RIMBP3CA6NJZ7 1639 aa17.85■□□□□ 0.45
SNRPCP13-201ENST00000505417 RIMBP3BA6NNM3 1639 aa17.85■□□□□ 0.45
SNRPCP13-201ENST00000505417 RIMBP3Q9UFD9 1639 aa17.85■□□□□ 0.45
SNRPCP13-201ENST00000505417 URB2Q14146 1524 aaKnown RBP17.82■□□□□ 0.44
SNRPCP13-201ENST00000505417 TOPBP1Q92547 1522 aa17.77■□□□□ 0.43
SNRPCP13-201ENST00000505417 DNMBPQ6XZF7 1577 aa17.74■□□□□ 0.43
SNRPCP13-201ENST00000505417 ARHGEF11O15085 1522 aa17.71■□□□□ 0.43
SNRPCP13-201ENST00000505417 CUX1P39880 1505 aa17.68■□□□□ 0.42
SNRPCP13-201ENST00000505417 WRNQ14191 1432 aaPredicted RBP eCLIP17.68■□□□□ 0.42
SNRPCP13-201ENST00000505417 IFT140Q96RY7 1462 aa17.64■□□□□ 0.41
SNRPCP13-201ENST00000505417 POLA1P09884 1462 aaPredicted RBP17.63■□□□□ 0.41
SNRPCP13-201ENST00000505417 TRHP20396 242 aaPredicted RBP17.6■□□□□ 0.41
SNRPCP13-201ENST00000505417 CYB5RLQ6IPT4 315 aa17.6■□□□□ 0.41
SNRPCP13-201ENST00000505417 FGD5Q6ZNL6 1462 aa17.59■□□□□ 0.41
SNRPCP13-201ENST00000505417 SOGA1O94964 1423 aa17.59■□□□□ 0.41
SNRPCP13-201ENST00000505417 TOP2BQ02880 1626 aa17.58■□□□□ 0.41
SNRPCP13-201ENST00000505417 AEBP2Q6ZN18 517 aaPredicted RBP17.57■□□□□ 0.4
SNRPCP13-201ENST00000505417 BIVM-ERCC5R4GMW8 1640 aa17.54■□□□□ 0.4
SNRPCP13-201ENST00000505417 SYNJ1O43426 1573 aa17.54■□□□□ 0.4
SNRPCP13-201ENST00000505417 TARBP1Q13395 1621 aaKnown RBP17.54■□□□□ 0.4
SNRPCP13-201ENST00000505417 RAD54L2Q9Y4B4 1467 aa17.52■□□□□ 0.4
SNRPCP13-201ENST00000505417 ZNF608Q9ULD9 1512 aaPredicted RBP17.52■□□□□ 0.39
SNRPCP13-201ENST00000505417 ARAP1Q96P48 1450 aa17.5■□□□□ 0.39
SNRPCP13-201ENST00000505417 ABCA10Q8WWZ4 1543 aa17.49■□□□□ 0.39
SNRPCP13-201ENST00000505417 WDR97A6NE52 1622 aa17.47■□□□□ 0.39
SNRPCP13-201ENST00000505417 TDRD9Q8NDG6 1382 aaKnown RBP17.44■□□□□ 0.38
SNRPCP13-201ENST00000505417 AQRO60306 1485 aaKnown RBP eCLIP17.44■□□□□ 0.38
SNRPCP13-201ENST00000505417 GAPVD1Q14C86 1478 aa17.37■□□□□ 0.37
SNRPCP13-201ENST00000505417 EIF4G3O43432 1585 aaKnown RBP17.37■□□□□ 0.37
SNRPCP13-201ENST00000505417 GRIN2BQ13224 1484 aa17.36■□□□□ 0.37
SNRPCP13-201ENST00000505417 CHD1O14646 1710 aa17.35■□□□□ 0.37
SNRPCP13-201ENST00000505417 CHIC1Q5VXU3 224 aa17.33■□□□□ 0.36
SNRPCP13-201ENST00000505417 ABCA5Q8WWZ7 1642 aa17.32■□□□□ 0.36
SNRPCP13-201ENST00000505417 KIF27Q86VH2 1401 aa17.32■□□□□ 0.36
SNRPCP13-201ENST00000505417 MAGI1Q96QZ7 1491 aaPredicted RBP17.3■□□□□ 0.36
SNRPCP13-201ENST00000505417 ERICH3Q5RHP9 1530 aa17.27■□□□□ 0.36
SNRPCP13-201ENST00000505417 IGF1RP08069 1367 aa17.27■□□□□ 0.35
SNRPCP13-201ENST00000505417 SNAPC4Q5SXM2 1469 aa17.24■□□□□ 0.35
SNRPCP13-201ENST00000505417 SYNJ2O15056 1496 aa17.22■□□□□ 0.35
SNRPCP13-201ENST00000505417 FHAD1B1AJZ9 1412 aa17.21■□□□□ 0.35
SNRPCP13-201ENST00000505417 CHMP7Q8WUX9 453 aaPredicted RBP17.21■□□□□ 0.35
SNRPCP13-201ENST00000505417 FBLN2P98095 1184 aa17.2■□□□□ 0.34
SNRPCP13-201ENST00000505417 PBRM1Q86U86 1689 aa17.17■□□□□ 0.34
SNRPCP13-201ENST00000505417 CLASP1Q7Z460 1538 aa17.16■□□□□ 0.34
SNRPCP13-201ENST00000505417 EEA1Q15075 1411 aa17.14■□□□□ 0.33
SNRPCP13-201ENST00000505417 RUSC2Q8N2Y8 1516 aa17.14■□□□□ 0.33
SNRPCP13-201ENST00000505417 CARMIL1Q5VZK9 1371 aa17.14■□□□□ 0.33
SNRPCP13-201ENST00000505417 ADAMTS12P58397 1594 aa17.13■□□□□ 0.33
SNRPCP13-201ENST00000505417 GRIN2AQ12879 1464 aa17.12■□□□□ 0.33
SNRPCP13-201ENST00000505417 CSRNP3Q8WYN3 585 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 84.7 ms