RNA–Protein interactions for RNA: ENST00000505392.5

CCHCR1-219, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 547 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-219ENST00000505392 NISCHQ9Y2I1 1504 aa29.4■■■□□ 2.3
CCHCR1-219ENST00000505392 ABCC9O60706 1549 aa27.09■■□□□ 1.93
CCHCR1-219ENST00000505392 CCDC180Q9P1Z9 1646 aa26.43■■□□□ 1.82
CCHCR1-219ENST00000505392 DNAJC5BQ9UF47 199 aa25.94■■□□□ 1.74
CCHCR1-219ENST00000505392 RB1CC1Q8TDY2 1594 aa25.48■■□□□ 1.67
CCHCR1-219ENST00000505392 DCAF8L2P0C7V8 631 aa25.29■■□□□ 1.64
CCHCR1-219ENST00000505392 PABPN1Q86U42 306 aaKnown RBP eCLIP25.27■■□□□ 1.64
CCHCR1-219ENST00000505392 NACADO15069 1562 aa25.2■■□□□ 1.62
CCHCR1-219ENST00000505392 UNC13AQ9UPW8 1703 aa24.79■■□□□ 1.56
CCHCR1-219ENST00000505392 BICRAQ9NZM4 1560 aa24.76■■□□□ 1.55
CCHCR1-219ENST00000505392 MYO15BQ96JP2 1530 aa24.69■■□□□ 1.54
CCHCR1-219ENST00000505392 CECR2Q9BXF3 1484 aa24.44■■□□□ 1.5
CCHCR1-219ENST00000505392 CC2D2AQ9P2K1 1620 aa24.37■■□□□ 1.49
CCHCR1-219ENST00000505392 SHROOM4Q9ULL8 1493 aa24.32■■□□□ 1.48
CCHCR1-219ENST00000505392 ZCCHC6Q5VYS8 1495 aaKnown RBP24.23■■□□□ 1.47
CCHCR1-219ENST00000505392 DCAF1Q9Y4B6 1507 aa24.2■■□□□ 1.47
CCHCR1-219ENST00000505392 EIF4G1Q04637 1599 aaKnown RBP24.2■■□□□ 1.46
CCHCR1-219ENST00000505392 SCRIBQ14160 1630 aa24.16■■□□□ 1.46
CCHCR1-219ENST00000505392 DNAJC5Q9H3Z4 198 aa24.13■■□□□ 1.45
CCHCR1-219ENST00000505392 CUX2O14529 1486 aa23.47■■□□□ 1.35
CCHCR1-219ENST00000505392 ERCC6Q03468 1493 aa23.41■■□□□ 1.34
CCHCR1-219ENST00000505392 NCAPD3P42695 1498 aa23.35■■□□□ 1.33
CCHCR1-219ENST00000505392 ATAD2BQ9ULI0 1458 aa23.21■■□□□ 1.31
CCHCR1-219ENST00000505392 NESP48681 1621 aa23.13■■□□□ 1.29
CCHCR1-219ENST00000505392 SMARCA2P51531 1590 aa23.05■■□□□ 1.28
CCHCR1-219ENST00000505392 HMGXB3Q12766 1538 aa23.03■■□□□ 1.28
CCHCR1-219ENST00000505392 SMARCA4P51532 1647 aa22.97■■□□□ 1.27
CCHCR1-219ENST00000505392 BAZ1BQ9UIG0 1483 aaKnown RBP22.93■■□□□ 1.26
CCHCR1-219ENST00000505392 TRIM41Q8WV44 630 aa22.93■■□□□ 1.26
CCHCR1-219ENST00000505392 THOC2Q8NI27 1593 aaKnown RBP22.85■■□□□ 1.25
CCHCR1-219ENST00000505392 BAZ1AQ9NRL2 1556 aaPredicted RBP22.83■■□□□ 1.25
CCHCR1-219ENST00000505392 LAMC3Q9Y6N6 1575 aa22.81■■□□□ 1.24
CCHCR1-219ENST00000505392 PDS5BQ9NTI5 1447 aa22.8■■□□□ 1.24
CCHCR1-219ENST00000505392 PEG3Q9GZU2 1588 aa22.74■■□□□ 1.23
CCHCR1-219ENST00000505392 KIF21AQ7Z4S6 1674 aa22.68■■□□□ 1.22
CCHCR1-219ENST00000505392 MROH2BQ7Z745 1585 aa22.67■■□□□ 1.22
CCHCR1-219ENST00000505392 CADPSQ9ULU8 1353 aa22.66■■□□□ 1.22
CCHCR1-219ENST00000505392 MRC2Q9UBG0 1479 aa22.57■■□□□ 1.2
CCHCR1-219ENST00000505392 OSCARQ8IYS5 282 aa22.5■■□□□ 1.19
CCHCR1-219ENST00000505392 WDR62O43379 1518 aa22.48■■□□□ 1.19
CCHCR1-219ENST00000505392 CEP164Q9UPV0 1460 aa22.39■■□□□ 1.17
CCHCR1-219ENST00000505392 FANCD2Q9BXW9 1451 aa22.35■■□□□ 1.17
CCHCR1-219ENST00000505392 WIZO95785 1651 aa22.33■■□□□ 1.17
CCHCR1-219ENST00000505392 CFTRP13569 1480 aa22.25■■□□□ 1.15
CCHCR1-219ENST00000505392 URB2Q14146 1524 aaKnown RBP22.17■■□□□ 1.14
CCHCR1-219ENST00000505392 RSF1Q96T23 1441 aaPredicted RBP22.07■■□□□ 1.12
CCHCR1-219ENST00000505392 RIMBP3CA6NJZ7 1639 aa22.06■■□□□ 1.12
CCHCR1-219ENST00000505392 RIMBP3BA6NNM3 1639 aa22.06■■□□□ 1.12
CCHCR1-219ENST00000505392 RIMBP3Q9UFD9 1639 aa22.06■■□□□ 1.12
CCHCR1-219ENST00000505392 CYB5RLQ6IPT4 315 aa22.03■■□□□ 1.12
CCHCR1-219ENST00000505392 ZNF608Q9ULD9 1512 aaPredicted RBP22.01■■□□□ 1.11
CCHCR1-219ENST00000505392 TOP2AP11388 1531 aaKnown RBP22■■□□□ 1.11
CCHCR1-219ENST00000505392 IFT140Q96RY7 1462 aa21.97■■□□□ 1.11
CCHCR1-219ENST00000505392 ARHGEF11O15085 1522 aa21.97■■□□□ 1.11
CCHCR1-219ENST00000505392 TRHP20396 242 aaPredicted RBP21.94■■□□□ 1.1
CCHCR1-219ENST00000505392 TOPBP1Q92547 1522 aa21.85■■□□□ 1.09
CCHCR1-219ENST00000505392 CCDC88BA6NC98 1476 aa21.85■■□□□ 1.09
CCHCR1-219ENST00000505392 FBLN2P98095 1184 aa21.85■■□□□ 1.09
CCHCR1-219ENST00000505392 AQRO60306 1485 aaKnown RBP eCLIP21.81■■□□□ 1.082e-10■■■■■ 47.9
CCHCR1-219ENST00000505392 ABCC8Q09428 1581 aa21.78■■□□□ 1.08
CCHCR1-219ENST00000505392 PRDM2Q13029 1718 aa21.76■■□□□ 1.07
CCHCR1-219ENST00000505392 EIF4G3O43432 1585 aaKnown RBP21.75■■□□□ 1.07
CCHCR1-219ENST00000505392 ARAP1Q96P48 1450 aa21.73■■□□□ 1.07
CCHCR1-219ENST00000505392 DNMBPQ6XZF7 1577 aa21.69■■□□□ 1.06
CCHCR1-219ENST00000505392 CHD1O14646 1710 aa21.65■■□□□ 1.06
CCHCR1-219ENST00000505392 TARBP1Q13395 1621 aaKnown RBP21.64■■□□□ 1.05
CCHCR1-219ENST00000505392 AEBP2Q6ZN18 517 aaPredicted RBP21.63■■□□□ 1.05
CCHCR1-219ENST00000505392 TDRD9Q8NDG6 1382 aaKnown RBP21.62■■□□□ 1.05
CCHCR1-219ENST00000505392 POLA1P09884 1462 aaPredicted RBP21.61■■□□□ 1.05
CCHCR1-219ENST00000505392 RAD54L2Q9Y4B4 1467 aa21.59■■□□□ 1.05
CCHCR1-219ENST00000505392 SOGA1O94964 1423 aa21.59■■□□□ 1.05
CCHCR1-219ENST00000505392 CHMP7Q8WUX9 453 aaPredicted RBP21.59■■□□□ 1.05
CCHCR1-219ENST00000505392 SNAPC4Q5SXM2 1469 aa21.5■■□□□ 1.03
CCHCR1-219ENST00000505392 CLASP1Q7Z460 1538 aa21.44■■□□□ 1.02
CCHCR1-219ENST00000505392 FGD5Q6ZNL6 1462 aa21.41■■□□□ 1.02
CCHCR1-219ENST00000505392 SYNJ1O43426 1573 aa21.4■■□□□ 1.02
CCHCR1-219ENST00000505392 MAGI1Q96QZ7 1491 aaPredicted RBP21.39■■□□□ 1.02
CCHCR1-219ENST00000505392 GRIN2BQ13224 1484 aa21.39■■□□□ 1.01
CCHCR1-219ENST00000505392 SYNJ2O15056 1496 aa21.35■■□□□ 1.01
CCHCR1-219ENST00000505392 WDR97A6NE52 1622 aa21.33■■□□□ 1.01
CCHCR1-219ENST00000505392 GAPVD1Q14C86 1478 aa21.32■■□□□ 1
CCHCR1-219ENST00000505392 CUX1P39880 1505 aa21.3■■□□□ 1
CCHCR1-219ENST00000505392 ABCA10Q8WWZ4 1543 aa21.14■□□□□ 0.97
CCHCR1-219ENST00000505392 ERCC6L2Q5T890 1561 aa21.13■□□□□ 0.97
CCHCR1-219ENST00000505392 PBRM1Q86U86 1689 aa21.12■□□□□ 0.97
CCHCR1-219ENST00000505392 GRIN2AQ12879 1464 aa21.09■□□□□ 0.97
CCHCR1-219ENST00000505392 ABCA5Q8WWZ7 1642 aa21.06■□□□□ 0.96
CCHCR1-219ENST00000505392 NUP160Q12769 1436 aa21.04■□□□□ 0.96
CCHCR1-219ENST00000505392 CEP170Q5SW79 1584 aa21.04■□□□□ 0.96
CCHCR1-219ENST00000505392 WRNQ14191 1432 aaPredicted RBP eCLIP21.02■□□□□ 0.96
CCHCR1-219ENST00000505392 JPH4Q96JJ6 628 aa20.98■□□□□ 0.95
CCHCR1-219ENST00000505392 FHAD1B1AJZ9 1412 aa20.97■□□□□ 0.95
CCHCR1-219ENST00000505392 FAM69CQ0P6D2 419 aa20.96■□□□□ 0.95
CCHCR1-219ENST00000505392 ADAMTS12P58397 1594 aa20.94■□□□□ 0.94
CCHCR1-219ENST00000505392 PRG4Q92954 1404 aaPredicted RBP20.94■□□□□ 0.94
CCHCR1-219ENST00000505392 NPM1P06748 294 aaKnown RBP eCLIP20.93■□□□□ 0.94
CCHCR1-219ENST00000505392 SUPT5HO00267 1087 aaKnown RBP20.91■□□□□ 0.94
CCHCR1-219ENST00000505392 SHROOM2Q13796 1616 aa20.91■□□□□ 0.94
CCHCR1-219ENST00000505392 KIF13AQ9H1H9 1805 aa20.85■□□□□ 0.93
CCHCR1-219ENST00000505392 ERICH3Q5RHP9 1530 aa20.83■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms