RNA–Protein interactions for RNA: ENST00000505377.1

COL25A1-205, Transcript of collagen type XXV alpha 1 chain, humanhuman

TSL 5

Gene COL25A1, Length 448 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-205ENST00000505377 NISCHQ9Y2I1 1504 aa30.65■■■□□ 2.5
COL25A1-205ENST00000505377 ABCC9O60706 1549 aa28.04■■■□□ 2.08
COL25A1-205ENST00000505377 CCDC180Q9P1Z9 1646 aa27.52■■■□□ 2
COL25A1-205ENST00000505377 DNAJC5BQ9UF47 199 aa26.72■■□□□ 1.87
COL25A1-205ENST00000505377 RB1CC1Q8TDY2 1594 aa26.41■■□□□ 1.82
COL25A1-205ENST00000505377 DCAF8L2P0C7V8 631 aa26.14■■□□□ 1.78
COL25A1-205ENST00000505377 NACADO15069 1562 aa26.14■■□□□ 1.78
COL25A1-205ENST00000505377 PABPN1Q86U42 306 aaKnown RBP eCLIP26.13■■□□□ 1.77
COL25A1-205ENST00000505377 UNC13AQ9UPW8 1703 aa25.85■■□□□ 1.73
COL25A1-205ENST00000505377 BICRAQ9NZM4 1560 aa25.75■■□□□ 1.71
COL25A1-205ENST00000505377 MYO15BQ96JP2 1530 aa25.63■■□□□ 1.69
COL25A1-205ENST00000505377 ZCCHC6Q5VYS8 1495 aaKnown RBP25.31■■□□□ 1.64
COL25A1-205ENST00000505377 CC2D2AQ9P2K1 1620 aa25.26■■□□□ 1.63
COL25A1-205ENST00000505377 CECR2Q9BXF3 1484 aa25.25■■□□□ 1.63
COL25A1-205ENST00000505377 DCAF1Q9Y4B6 1507 aa25.21■■□□□ 1.63
COL25A1-205ENST00000505377 SCRIBQ14160 1630 aa25.19■■□□□ 1.62
COL25A1-205ENST00000505377 SHROOM4Q9ULL8 1493 aa25.19■■□□□ 1.62
COL25A1-205ENST00000505377 EIF4G1Q04637 1599 aaKnown RBP25.1■■□□□ 1.61
COL25A1-205ENST00000505377 DNAJC5Q9H3Z4 198 aa24.66■■□□□ 1.54
COL25A1-205ENST00000505377 NCAPD3P42695 1498 aa24.19■■□□□ 1.46
COL25A1-205ENST00000505377 CUX2O14529 1486 aa24.18■■□□□ 1.46
COL25A1-205ENST00000505377 ERCC6Q03468 1493 aa24.16■■□□□ 1.46
COL25A1-205ENST00000505377 ATAD2BQ9ULI0 1458 aa24.11■■□□□ 1.45
COL25A1-205ENST00000505377 NESP48681 1621 aa24.02■■□□□ 1.44
COL25A1-205ENST00000505377 SMARCA4P51532 1647 aa23.95■■□□□ 1.43
COL25A1-205ENST00000505377 SMARCA2P51531 1590 aa23.94■■□□□ 1.42
COL25A1-205ENST00000505377 HMGXB3Q12766 1538 aa23.93■■□□□ 1.42
COL25A1-205ENST00000505377 BAZ1BQ9UIG0 1483 aaKnown RBP23.81■■□□□ 1.4
COL25A1-205ENST00000505377 BAZ1AQ9NRL2 1556 aaPredicted RBP23.75■■□□□ 1.39
COL25A1-205ENST00000505377 THOC2Q8NI27 1593 aaKnown RBP23.74■■□□□ 1.39
COL25A1-205ENST00000505377 PEG3Q9GZU2 1588 aa23.68■■□□□ 1.38
COL25A1-205ENST00000505377 MROH2BQ7Z745 1585 aa23.67■■□□□ 1.38
COL25A1-205ENST00000505377 LAMC3Q9Y6N6 1575 aa23.64■■□□□ 1.37
COL25A1-205ENST00000505377 KIF21AQ7Z4S6 1674 aa23.6■■□□□ 1.37
COL25A1-205ENST00000505377 PDS5BQ9NTI5 1447 aa23.55■■□□□ 1.36
COL25A1-205ENST00000505377 TRIM41Q8WV44 630 aa23.5■■□□□ 1.35
COL25A1-205ENST00000505377 CADPSQ9ULU8 1353 aa23.47■■□□□ 1.35
COL25A1-205ENST00000505377 MRC2Q9UBG0 1479 aa23.39■■□□□ 1.34
COL25A1-205ENST00000505377 WIZO95785 1651 aa23.35■■□□□ 1.33
COL25A1-205ENST00000505377 WDR62O43379 1518 aa23.33■■□□□ 1.32
COL25A1-205ENST00000505377 CEP164Q9UPV0 1460 aa23.22■■□□□ 1.31
COL25A1-205ENST00000505377 FANCD2Q9BXW9 1451 aa23.2■■□□□ 1.3
COL25A1-205ENST00000505377 CFTRP13569 1480 aa23.11■■□□□ 1.29
COL25A1-205ENST00000505377 OSCARQ8IYS5 282 aa23.1■■□□□ 1.29
COL25A1-205ENST00000505377 URB2Q14146 1524 aaKnown RBP23.07■■□□□ 1.28
COL25A1-205ENST00000505377 RSF1Q96T23 1441 aaPredicted RBP23.06■■□□□ 1.28
COL25A1-205ENST00000505377 TOP2AP11388 1531 aaKnown RBP22.97■■□□□ 1.27
COL25A1-205ENST00000505377 ZNF608Q9ULD9 1512 aaPredicted RBP22.87■■□□□ 1.25
COL25A1-205ENST00000505377 RIMBP3CA6NJZ7 1639 aa22.82■■□□□ 1.24
COL25A1-205ENST00000505377 RIMBP3BA6NNM3 1639 aa22.82■■□□□ 1.24
COL25A1-205ENST00000505377 RIMBP3Q9UFD9 1639 aa22.82■■□□□ 1.24
COL25A1-205ENST00000505377 CCDC88BA6NC98 1476 aa22.79■■□□□ 1.24
COL25A1-205ENST00000505377 IFT140Q96RY7 1462 aa22.77■■□□□ 1.24
COL25A1-205ENST00000505377 PRDM2Q13029 1718 aa22.74■■□□□ 1.23
COL25A1-205ENST00000505377 TOPBP1Q92547 1522 aa22.72■■□□□ 1.23
COL25A1-205ENST00000505377 ARHGEF11O15085 1522 aa22.72■■□□□ 1.23
COL25A1-205ENST00000505377 CYB5RLQ6IPT4 315 aa22.65■■□□□ 1.22
COL25A1-205ENST00000505377 EIF4G3O43432 1585 aaKnown RBP22.63■■□□□ 1.21
COL25A1-205ENST00000505377 AQRO60306 1485 aaKnown RBP eCLIP22.62■■□□□ 1.21
COL25A1-205ENST00000505377 DNMBPQ6XZF7 1577 aa22.57■■□□□ 1.2
COL25A1-205ENST00000505377 ABCC8Q09428 1581 aa22.55■■□□□ 1.2
COL25A1-205ENST00000505377 FBLN2P98095 1184 aa22.54■■□□□ 1.2
COL25A1-205ENST00000505377 TARBP1Q13395 1621 aaKnown RBP22.53■■□□□ 1.2
COL25A1-205ENST00000505377 CHD1O14646 1710 aa22.53■■□□□ 1.2
COL25A1-205ENST00000505377 ARAP1Q96P48 1450 aa22.5■■□□□ 1.19
COL25A1-205ENST00000505377 TRHP20396 242 aaPredicted RBP22.48■■□□□ 1.19
COL25A1-205ENST00000505377 POLA1P09884 1462 aaPredicted RBP22.47■■□□□ 1.19
COL25A1-205ENST00000505377 RAD54L2Q9Y4B4 1467 aa22.47■■□□□ 1.19
COL25A1-205ENST00000505377 TDRD9Q8NDG6 1382 aaKnown RBP22.44■■□□□ 1.18
COL25A1-205ENST00000505377 SOGA1O94964 1423 aa22.38■■□□□ 1.17
COL25A1-205ENST00000505377 SNAPC4Q5SXM2 1469 aa22.33■■□□□ 1.16
COL25A1-205ENST00000505377 FGD5Q6ZNL6 1462 aa22.29■■□□□ 1.16
COL25A1-205ENST00000505377 CHMP7Q8WUX9 453 aaPredicted RBP22.27■■□□□ 1.16
COL25A1-205ENST00000505377 CLASP1Q7Z460 1538 aa22.26■■□□□ 1.15
COL25A1-205ENST00000505377 CUX1P39880 1505 aa22.24■■□□□ 1.15
COL25A1-205ENST00000505377 GRIN2BQ13224 1484 aa22.18■■□□□ 1.14
COL25A1-205ENST00000505377 MAGI1Q96QZ7 1491 aaPredicted RBP22.18■■□□□ 1.14
COL25A1-205ENST00000505377 SYNJ1O43426 1573 aa22.17■■□□□ 1.14
COL25A1-205ENST00000505377 WDR97A6NE52 1622 aa22.14■■□□□ 1.14
COL25A1-205ENST00000505377 SYNJ2O15056 1496 aa22.14■■□□□ 1.13
COL25A1-205ENST00000505377 GAPVD1Q14C86 1478 aa22.08■■□□□ 1.12
COL25A1-205ENST00000505377 PBRM1Q86U86 1689 aa22.04■■□□□ 1.12
COL25A1-205ENST00000505377 AEBP2Q6ZN18 517 aaPredicted RBP22.02■■□□□ 1.12
COL25A1-205ENST00000505377 ERCC6L2Q5T890 1561 aa21.99■■□□□ 1.11
COL25A1-205ENST00000505377 ABCA10Q8WWZ4 1543 aa21.99■■□□□ 1.11
COL25A1-205ENST00000505377 ABCA5Q8WWZ7 1642 aa21.97■■□□□ 1.11
COL25A1-205ENST00000505377 GRIN2AQ12879 1464 aa21.9■■□□□ 1.1
COL25A1-205ENST00000505377 SUPT5HO00267 1087 aaKnown RBP21.87■■□□□ 1.09
COL25A1-205ENST00000505377 CEP170Q5SW79 1584 aa21.87■■□□□ 1.09
COL25A1-205ENST00000505377 NUP160Q12769 1436 aa21.85■■□□□ 1.09
COL25A1-205ENST00000505377 ADAMTS12P58397 1594 aa21.83■■□□□ 1.09
COL25A1-205ENST00000505377 WRNQ14191 1432 aaPredicted RBP eCLIP21.83■■□□□ 1.09
COL25A1-205ENST00000505377 FHAD1B1AJZ9 1412 aa21.77■■□□□ 1.08
COL25A1-205ENST00000505377 SHROOM2Q13796 1616 aa21.76■■□□□ 1.07
COL25A1-205ENST00000505377 TOP2BQ02880 1626 aa21.73■■□□□ 1.07
COL25A1-205ENST00000505377 BIVM-ERCC5R4GMW8 1640 aa21.71■■□□□ 1.07
COL25A1-205ENST00000505377 PRG4Q92954 1404 aaPredicted RBP21.7■■□□□ 1.06
COL25A1-205ENST00000505377 JPH4Q96JJ6 628 aa21.67■■□□□ 1.06
COL25A1-205ENST00000505377 KIF13AQ9H1H9 1805 aa21.66■■□□□ 1.06
COL25A1-205ENST00000505377 ERICH3Q5RHP9 1530 aa21.66■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms