RNA–Protein interactions for RNA: ENST00000505350.1

APC-205, Transcript of APC, WNT signaling pathway regulator, humanhuman

TSL 3

Gene APC, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APC-205ENST00000505350 NISCHQ9Y2I1 1504 aa52.06■■■■■ 5.92
APC-205ENST00000505350 CCDC180Q9P1Z9 1646 aa46.18■■■■■ 4.98
APC-205ENST00000505350 ABCC9O60706 1549 aa45.38■■■■■ 4.86
APC-205ENST00000505350 RB1CC1Q8TDY2 1594 aa43.51■■■■■ 4.56
APC-205ENST00000505350 DCAF8L2P0C7V8 631 aa43.49■■■■■ 4.55
APC-205ENST00000505350 NACADO15069 1562 aa43.48■■■■■ 4.55
APC-205ENST00000505350 ZCCHC6Q5VYS8 1495 aaKnown RBP43.38■■■■■ 4.53
APC-205ENST00000505350 MYO15BQ96JP2 1530 aa43.21■■■■■ 4.51
APC-205ENST00000505350 DCAF1Q9Y4B6 1507 aa43.02■■■■■ 4.48
APC-205ENST00000505350 UNC13AQ9UPW8 1703 aa42.53■■■■■ 4.4
APC-205ENST00000505350 PABPN1Q86U42 306 aaKnown RBP eCLIP42.44■■■■■ 4.38
APC-205ENST00000505350 BICRAQ9NZM4 1560 aa42.32■■■■■ 4.37
APC-205ENST00000505350 SCRIBQ14160 1630 aa42.24■■■■■ 4.35
APC-205ENST00000505350 DNAJC5BQ9UF47 199 aa41.81■■■■■ 4.28
APC-205ENST00000505350 SHROOM4Q9ULL8 1493 aa41.73■■■■■ 4.27
APC-205ENST00000505350 EIF4G1Q04637 1599 aaKnown RBP41.16■■■■■ 4.18
APC-205ENST00000505350 CC2D2AQ9P2K1 1620 aa41■■■■■ 4.15
APC-205ENST00000505350 CECR2Q9BXF3 1484 aa40.75■■■■■ 4.11
APC-205ENST00000505350 SMARCA4P51532 1647 aa40.38■■■■■ 4.05
APC-205ENST00000505350 BAZ1AQ9NRL2 1556 aaPredicted RBP40.3■■■■■ 4.04
APC-205ENST00000505350 ATAD2BQ9ULI0 1458 aa40.23■■■■■ 4.03
APC-205ENST00000505350 NCAPD3P42695 1498 aa40.19■■■■■ 4.02
APC-205ENST00000505350 MROH2BQ7Z745 1585 aa40.17■■■■■ 4.02
APC-205ENST00000505350 SMARCA2P51531 1590 aa40.07■■■■■ 4.01
APC-205ENST00000505350 PEG3Q9GZU2 1588 aa39.98■■■■□ 3.99
APC-205ENST00000505350 HMGXB3Q12766 1538 aa39.93■■■■□ 3.98
APC-205ENST00000505350 BAZ1BQ9UIG0 1483 aaKnown RBP39.82■■■■□ 3.97
APC-205ENST00000505350 RSF1Q96T23 1441 aaPredicted RBP39.7■■■■□ 3.95
APC-205ENST00000505350 WIZO95785 1651 aa39.68■■■■□ 3.94
APC-205ENST00000505350 NESP48681 1621 aa39.29■■■■□ 3.88
APC-205ENST00000505350 TOP2AP11388 1531 aaKnown RBP39.24■■■■□ 3.87
APC-205ENST00000505350 LAMC3Q9Y6N6 1575 aa39.05■■■■□ 3.84
APC-205ENST00000505350 ERCC6Q03468 1493 aa39.03■■■■□ 3.84
APC-205ENST00000505350 CADPSQ9ULU8 1353 aa39.01■■■■□ 3.84
APC-205ENST00000505350 CCDC88BA6NC98 1476 aa38.83■■■■□ 3.81
APC-205ENST00000505350 PDS5BQ9NTI5 1447 aa38.8■■■■□ 3.8
APC-205ENST00000505350 CFTRP13569 1480 aa38.78■■■■□ 3.8
APC-205ENST00000505350 KIF21AQ7Z4S6 1674 aa38.71■■■■□ 3.79
APC-205ENST00000505350 CUX2O14529 1486 aa38.64■■■■□ 3.78
APC-205ENST00000505350 THOC2Q8NI27 1593 aaKnown RBP38.64■■■■□ 3.78
APC-205ENST00000505350 SUPT5HO00267 1087 aaKnown RBP38.63■■■■□ 3.77
APC-205ENST00000505350 FANCD2Q9BXW9 1451 aa38.56■■■■□ 3.76
APC-205ENST00000505350 CEP164Q9UPV0 1460 aa38.47■■■■□ 3.75
APC-205ENST00000505350 MRC2Q9UBG0 1479 aa38.45■■■■□ 3.75
APC-205ENST00000505350 WDR62O43379 1518 aa38.33■■■■□ 3.73
APC-205ENST00000505350 PRDM2Q13029 1718 aa38.3■■■■□ 3.72
APC-205ENST00000505350 URB2Q14146 1524 aaKnown RBP38.22■■■■□ 3.71
APC-205ENST00000505350 TOPBP1Q92547 1522 aa37.95■■■■□ 3.67
APC-205ENST00000505350 DNMBPQ6XZF7 1577 aa37.85■■■■□ 3.65
APC-205ENST00000505350 ABCC8Q09428 1581 aa37.83■■■■□ 3.65
APC-205ENST00000505350 IFT140Q96RY7 1462 aa37.68■■■■□ 3.62
APC-205ENST00000505350 CUX1P39880 1505 aa37.67■■■■□ 3.62
APC-205ENST00000505350 POLA1P09884 1462 aaPredicted RBP37.64■■■■□ 3.62
APC-205ENST00000505350 ZNF608Q9ULD9 1512 aaPredicted RBP37.61■■■■□ 3.61
APC-205ENST00000505350 DNAJC5Q9H3Z4 198 aa37.57■■■■□ 3.6
APC-205ENST00000505350 FGD5Q6ZNL6 1462 aa37.53■■■■□ 3.6
APC-205ENST00000505350 TARBP1Q13395 1621 aaKnown RBP37.52■■■■□ 3.6
APC-205ENST00000505350 RAD54L2Q9Y4B4 1467 aa37.52■■■■□ 3.6
APC-205ENST00000505350 SOGA1O94964 1423 aa37.45■■■■□ 3.59
APC-205ENST00000505350 WRNQ14191 1432 aaPredicted RBP eCLIP37.38■■■■□ 3.57
APC-205ENST00000505350 AQRO60306 1485 aaKnown RBP eCLIP37.37■■■■□ 3.57
APC-205ENST00000505350 EIF4G3O43432 1585 aaKnown RBP37.37■■■■□ 3.57
APC-205ENST00000505350 SYNJ1O43426 1573 aa37.31■■■■□ 3.56
APC-205ENST00000505350 TDRD9Q8NDG6 1382 aaKnown RBP37.29■■■■□ 3.56
APC-205ENST00000505350 TOP2BQ02880 1626 aa37.27■■■■□ 3.56
APC-205ENST00000505350 BIVM-ERCC5R4GMW8 1640 aa37.25■■■■□ 3.55
APC-205ENST00000505350 WDR97A6NE52 1622 aa37.17■■■■□ 3.54
APC-205ENST00000505350 ABCA10Q8WWZ4 1543 aa37.15■■■■□ 3.54
APC-205ENST00000505350 OSCARQ8IYS5 282 aa37.04■■■■□ 3.52
APC-205ENST00000505350 GRIN2BQ13224 1484 aa37.01■■■■□ 3.51
APC-205ENST00000505350 GAPVD1Q14C86 1478 aa37.01■■■■□ 3.51
APC-205ENST00000505350 SNAPC4Q5SXM2 1469 aa37■■■■□ 3.51
APC-205ENST00000505350 ABCA5Q8WWZ7 1642 aa36.99■■■■□ 3.51
APC-205ENST00000505350 MAGI1Q96QZ7 1491 aaPredicted RBP36.88■■■■□ 3.5
APC-205ENST00000505350 CHD1O14646 1710 aa36.86■■■■□ 3.49
APC-205ENST00000505350 FBLN2P98095 1184 aa36.86■■■■□ 3.49
APC-205ENST00000505350 PBRM1Q86U86 1689 aa36.86■■■■□ 3.49
APC-205ENST00000505350 SYNJ2O15056 1496 aa36.76■■■■□ 3.48
APC-205ENST00000505350 CHMP7Q8WUX9 453 aaPredicted RBP36.74■■■■□ 3.47
APC-205ENST00000505350 ERICH3Q5RHP9 1530 aa36.66■■■■□ 3.46
APC-205ENST00000505350 ADAMTS12P58397 1594 aa36.65■■■■□ 3.46
APC-205ENST00000505350 FHAD1B1AJZ9 1412 aa36.58■■■■□ 3.45
APC-205ENST00000505350 KIF27Q86VH2 1401 aa36.57■■■■□ 3.44
APC-205ENST00000505350 CLASP1Q7Z460 1538 aa36.54■■■■□ 3.44
APC-205ENST00000505350 GRIN2AQ12879 1464 aa36.54■■■■□ 3.44
APC-205ENST00000505350 IGF1RP08069 1367 aa36.51■■■■□ 3.43
APC-205ENST00000505350 ARHGEF11O15085 1522 aa36.49■■■■□ 3.43
APC-205ENST00000505350 RIMBP3CA6NJZ7 1639 aa36.46■■■■□ 3.43
APC-205ENST00000505350 RIMBP3BA6NNM3 1639 aa36.46■■■■□ 3.43
APC-205ENST00000505350 RIMBP3Q9UFD9 1639 aa36.46■■■■□ 3.43
APC-205ENST00000505350 TRIM41Q8WV44 630 aa36.43■■■■□ 3.42
APC-205ENST00000505350 NUP160Q12769 1436 aa36.42■■■■□ 3.42
APC-205ENST00000505350 CEP170Q5SW79 1584 aa36.39■■■■□ 3.42
APC-205ENST00000505350 RUSC2Q8N2Y8 1516 aa36.36■■■■□ 3.41
APC-205ENST00000505350 CUL7Q14999 1698 aa36.26■■■■□ 3.4
APC-205ENST00000505350 CARMIL1Q5VZK9 1371 aa36.25■■■■□ 3.39
APC-205ENST00000505350 ARAP1Q96P48 1450 aa36.24■■■■□ 3.39
APC-205ENST00000505350 CYB5RLQ6IPT4 315 aa36.15■■■■□ 3.38
APC-205ENST00000505350 ERCC6L2Q5T890 1561 aa36.1■■■■□ 3.37
APC-205ENST00000505350 SHROOM2Q13796 1616 aa36.09■■■■□ 3.37
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms