RNA–Protein interactions for RNA: ENST00000505265.5

RGMB-204, Transcript of repulsive guidance molecule BMP co-receptor b, humanhuman

TSL 1 (best)

Gene RGMB, Length 446 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGMB-204ENST00000505265 NISCHQ9Y2I1 1504 aa52.86■■■■■ 6.05
RGMB-204ENST00000505265 ABCC9O60706 1549 aa47.54■■■■■ 5.2
RGMB-204ENST00000505265 CCDC180Q9P1Z9 1646 aa47.48■■■■■ 5.19
RGMB-204ENST00000505265 RB1CC1Q8TDY2 1594 aa45.23■■■■■ 4.83
RGMB-204ENST00000505265 NACADO15069 1562 aa44.9■■■■■ 4.78
RGMB-204ENST00000505265 DCAF8L2P0C7V8 631 aa44.62■■■■■ 4.73
RGMB-204ENST00000505265 DNAJC5BQ9UF47 199 aa44.61■■■■■ 4.73
RGMB-204ENST00000505265 MYO15BQ96JP2 1530 aa44.24■■■■■ 4.67
RGMB-204ENST00000505265 PABPN1Q86U42 306 aaKnown RBP eCLIP44.23■■■■■ 4.67
RGMB-204ENST00000505265 UNC13AQ9UPW8 1703 aa44.22■■■■■ 4.67
RGMB-204ENST00000505265 BICRAQ9NZM4 1560 aa43.92■■■■■ 4.62
RGMB-204ENST00000505265 ZCCHC6Q5VYS8 1495 aaKnown RBP43.82■■■■■ 4.6
RGMB-204ENST00000505265 DCAF1Q9Y4B6 1507 aa43.66■■■■■ 4.58
RGMB-204ENST00000505265 SHROOM4Q9ULL8 1493 aa43.32■■■■■ 4.52
RGMB-204ENST00000505265 SCRIBQ14160 1630 aa43.29■■■■■ 4.52
RGMB-204ENST00000505265 CC2D2AQ9P2K1 1620 aa42.95■■■■■ 4.47
RGMB-204ENST00000505265 EIF4G1Q04637 1599 aaKnown RBP42.85■■■■■ 4.45
RGMB-204ENST00000505265 CECR2Q9BXF3 1484 aa42.83■■■■■ 4.45
RGMB-204ENST00000505265 NCAPD3P42695 1498 aa41.43■■■■■ 4.22
RGMB-204ENST00000505265 ATAD2BQ9ULI0 1458 aa41.31■■■■■ 4.2
RGMB-204ENST00000505265 SMARCA4P51532 1647 aa41.27■■■■■ 4.2
RGMB-204ENST00000505265 SMARCA2P51531 1590 aa41.2■■■■■ 4.19
RGMB-204ENST00000505265 HMGXB3Q12766 1538 aa41.15■■■■■ 4.18
RGMB-204ENST00000505265 ERCC6Q03468 1493 aa41.07■■■■■ 4.16
RGMB-204ENST00000505265 BAZ1AQ9NRL2 1556 aaPredicted RBP41.04■■■■■ 4.16
RGMB-204ENST00000505265 DNAJC5Q9H3Z4 198 aa41.01■■■■■ 4.16
RGMB-204ENST00000505265 CUX2O14529 1486 aa41.01■■■■■ 4.16
RGMB-204ENST00000505265 BAZ1BQ9UIG0 1483 aaKnown RBP40.92■■■■■ 4.14
RGMB-204ENST00000505265 PEG3Q9GZU2 1588 aa40.86■■■■■ 4.13
RGMB-204ENST00000505265 NESP48681 1621 aa40.82■■■■■ 4.13
RGMB-204ENST00000505265 MROH2BQ7Z745 1585 aa40.74■■■■■ 4.11
RGMB-204ENST00000505265 LAMC3Q9Y6N6 1575 aa40.53■■■■■ 4.08
RGMB-204ENST00000505265 THOC2Q8NI27 1593 aaKnown RBP40.44■■■■■ 4.06
RGMB-204ENST00000505265 KIF21AQ7Z4S6 1674 aa40.32■■■■■ 4.05
RGMB-204ENST00000505265 PDS5BQ9NTI5 1447 aa40.28■■■■■ 4.04
RGMB-204ENST00000505265 WIZO95785 1651 aa40.26■■■■■ 4.04
RGMB-204ENST00000505265 CADPSQ9ULU8 1353 aa40.17■■■■■ 4.02
RGMB-204ENST00000505265 MRC2Q9UBG0 1479 aa39.96■■■■□ 3.99
RGMB-204ENST00000505265 WDR62O43379 1518 aa39.87■■■■□ 3.97
RGMB-204ENST00000505265 RSF1Q96T23 1441 aaPredicted RBP39.86■■■■□ 3.97
RGMB-204ENST00000505265 CEP164Q9UPV0 1460 aa39.8■■■■□ 3.96
RGMB-204ENST00000505265 TOP2AP11388 1531 aaKnown RBP39.75■■■■□ 3.95
RGMB-204ENST00000505265 FANCD2Q9BXW9 1451 aa39.74■■■■□ 3.95
RGMB-204ENST00000505265 CFTRP13569 1480 aa39.71■■■■□ 3.95
RGMB-204ENST00000505265 URB2Q14146 1524 aaKnown RBP39.42■■■■□ 3.9
RGMB-204ENST00000505265 PRDM2Q13029 1718 aa39.34■■■■□ 3.89
RGMB-204ENST00000505265 CCDC88BA6NC98 1476 aa39.28■■■■□ 3.88
RGMB-204ENST00000505265 TRIM41Q8WV44 630 aa39.22■■■■□ 3.87
RGMB-204ENST00000505265 OSCARQ8IYS5 282 aa39.08■■■■□ 3.85
RGMB-204ENST00000505265 IFT140Q96RY7 1462 aa38.98■■■■□ 3.83
RGMB-204ENST00000505265 TOPBP1Q92547 1522 aa38.98■■■■□ 3.83
RGMB-204ENST00000505265 ZNF608Q9ULD9 1512 aaPredicted RBP38.94■■■■□ 3.82
RGMB-204ENST00000505265 ABCC8Q09428 1581 aa38.87■■■■□ 3.81
RGMB-204ENST00000505265 DNMBPQ6XZF7 1577 aa38.84■■■■□ 3.81
RGMB-204ENST00000505265 EIF4G3O43432 1585 aaKnown RBP38.75■■■■□ 3.79
RGMB-204ENST00000505265 TARBP1Q13395 1621 aaKnown RBP38.64■■■■□ 3.78
RGMB-204ENST00000505265 RIMBP3CA6NJZ7 1639 aa38.63■■■■□ 3.78
RGMB-204ENST00000505265 RIMBP3BA6NNM3 1639 aa38.63■■■■□ 3.78
RGMB-204ENST00000505265 RIMBP3Q9UFD9 1639 aa38.63■■■■□ 3.78
RGMB-204ENST00000505265 POLA1P09884 1462 aaPredicted RBP38.58■■■■□ 3.77
RGMB-204ENST00000505265 AQRO60306 1485 aaKnown RBP eCLIP38.57■■■■□ 3.76
RGMB-204ENST00000505265 ARHGEF11O15085 1522 aa38.5■■■■□ 3.75
RGMB-204ENST00000505265 CHD1O14646 1710 aa38.47■■■■□ 3.75
RGMB-204ENST00000505265 RAD54L2Q9Y4B4 1467 aa38.43■■■■□ 3.74
RGMB-204ENST00000505265 SOGA1O94964 1423 aa38.38■■■■□ 3.73
RGMB-204ENST00000505265 FGD5Q6ZNL6 1462 aa38.33■■■■□ 3.73
RGMB-204ENST00000505265 FBLN2P98095 1184 aa38.32■■■■□ 3.72
RGMB-204ENST00000505265 TDRD9Q8NDG6 1382 aaKnown RBP38.31■■■■□ 3.72
RGMB-204ENST00000505265 CUX1P39880 1505 aa38.29■■■■□ 3.72
RGMB-204ENST00000505265 WDR97A6NE52 1622 aa38.24■■■■□ 3.71
RGMB-204ENST00000505265 SNAPC4Q5SXM2 1469 aa38.2■■■■□ 3.71
RGMB-204ENST00000505265 CYB5RLQ6IPT4 315 aa38.19■■■■□ 3.7
RGMB-204ENST00000505265 ARAP1Q96P48 1450 aa38.12■■■■□ 3.69
RGMB-204ENST00000505265 MAGI1Q96QZ7 1491 aaPredicted RBP38.09■■■■□ 3.69
RGMB-204ENST00000505265 GRIN2BQ13224 1484 aa38.07■■■■□ 3.68
RGMB-204ENST00000505265 SUPT5HO00267 1087 aaKnown RBP38.03■■■■□ 3.68
RGMB-204ENST00000505265 CHMP7Q8WUX9 453 aaPredicted RBP38.02■■■■□ 3.68
RGMB-204ENST00000505265 CLASP1Q7Z460 1538 aa38.02■■■■□ 3.68
RGMB-204ENST00000505265 SYNJ1O43426 1573 aa37.99■■■■□ 3.67
RGMB-204ENST00000505265 SYNJ2O15056 1496 aa37.96■■■■□ 3.67
RGMB-204ENST00000505265 PBRM1Q86U86 1689 aa37.95■■■■□ 3.67
RGMB-204ENST00000505265 GAPVD1Q14C86 1478 aa37.93■■■■□ 3.66
RGMB-204ENST00000505265 ABCA10Q8WWZ4 1543 aa37.88■■■■□ 3.65
RGMB-204ENST00000505265 ABCA5Q8WWZ7 1642 aa37.86■■■■□ 3.65
RGMB-204ENST00000505265 TRHP20396 242 aaPredicted RBP37.79■■■■□ 3.64
RGMB-204ENST00000505265 WRNQ14191 1432 aaPredicted RBP eCLIP37.71■■■■□ 3.63
RGMB-204ENST00000505265 BIVM-ERCC5R4GMW8 1640 aa37.67■■■■□ 3.62
RGMB-204ENST00000505265 TOP2BQ02880 1626 aa37.65■■■■□ 3.62
RGMB-204ENST00000505265 GRIN2AQ12879 1464 aa37.59■■■■□ 3.61
RGMB-204ENST00000505265 ADAMTS12P58397 1594 aa37.58■■■■□ 3.61
RGMB-204ENST00000505265 CEP170Q5SW79 1584 aa37.46■■■■□ 3.59
RGMB-204ENST00000505265 NUP160Q12769 1436 aa37.46■■■■□ 3.59
RGMB-204ENST00000505265 FHAD1B1AJZ9 1412 aa37.44■■■■□ 3.58
RGMB-204ENST00000505265 ERCC6L2Q5T890 1561 aa37.42■■■■□ 3.58
RGMB-204ENST00000505265 ERICH3Q5RHP9 1530 aa37.41■■■■□ 3.58
RGMB-204ENST00000505265 SHROOM2Q13796 1616 aa37.32■■■■□ 3.56
RGMB-204ENST00000505265 PRG4Q92954 1404 aaPredicted RBP37.1■■■■□ 3.53
RGMB-204ENST00000505265 RUSC2Q8N2Y8 1516 aa37.05■■■■□ 3.52
RGMB-204ENST00000505265 JPH4Q96JJ6 628 aa37.04■■■■□ 3.52
RGMB-204ENST00000505265 KIF27Q86VH2 1401 aa36.91■■■■□ 3.5
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms