RNA–Protein interactions for RNA: ENST00000505249.1

SNX18P24-201, Transcript of sorting nexin 18 pseudogene 24, humanhuman

BASIC

Gene SNX18P24, Length 671 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18P24-201ENST00000505249 CHIC1Q5VXU3 224 aa15.57■□□□□ 0.08
SNX18P24-201ENST00000505249 AEBP2Q6ZN18 517 aaPredicted RBP15.54■□□□□ 0.08
SNX18P24-201ENST00000505249 NISCHQ9Y2I1 1504 aa15.27■□□□□ 0.04
SNX18P24-201ENST00000505249 PHF23Q9BUL5 403 aaPredicted RBP13.72□□□□□ -0.21
SNX18P24-201ENST00000505249 CCDC180Q9P1Z9 1646 aa13.65□□□□□ -0.22
SNX18P24-201ENST00000505249 ABCC9O60706 1549 aa13.54□□□□□ -0.24
SNX18P24-201ENST00000505249 SENP3Q9H4L4 574 aaPredicted RBP13.15□□□□□ -0.3
SNX18P24-201ENST00000505249 DCAF8L2P0C7V8 631 aa12.99□□□□□ -0.33
SNX18P24-201ENST00000505249 RB1CC1Q8TDY2 1594 aa12.91□□□□□ -0.34
SNX18P24-201ENST00000505249 NACADO15069 1562 aa12.82□□□□□ -0.36
SNX18P24-201ENST00000505249 PLPPR3Q6T4P5 718 aa12.81□□□□□ -0.36
SNX18P24-201ENST00000505249 UNC13AQ9UPW8 1703 aa12.74□□□□□ -0.37
SNX18P24-201ENST00000505249 ZCCHC6Q5VYS8 1495 aaKnown RBP12.69□□□□□ -0.38
SNX18P24-201ENST00000505249 PABPN1Q86U42 306 aaKnown RBP eCLIP12.65□□□□□ -0.38
SNX18P24-201ENST00000505249 MYO15BQ96JP2 1530 aa12.6□□□□□ -0.39
SNX18P24-201ENST00000505249 SCRIBQ14160 1630 aa12.56□□□□□ -0.4
SNX18P24-201ENST00000505249 DCAF1Q9Y4B6 1507 aa12.53□□□□□ -0.4
SNX18P24-201ENST00000505249 BICRAQ9NZM4 1560 aa12.51□□□□□ -0.41
SNX18P24-201ENST00000505249 DNAJC5BQ9UF47 199 aa12.47□□□□□ -0.41
SNX18P24-201ENST00000505249 SHROOM4Q9ULL8 1493 aa12.25□□□□□ -0.45
SNX18P24-201ENST00000505249 CC2D2AQ9P2K1 1620 aa12.22□□□□□ -0.45
SNX18P24-201ENST00000505249 EIF4G1Q04637 1599 aaKnown RBP12.22□□□□□ -0.45
SNX18P24-201ENST00000505249 CECR2Q9BXF3 1484 aa12.14□□□□□ -0.47
SNX18P24-201ENST00000505249 FOXD1Q16676 465 aa12.13□□□□□ -0.47
SNX18P24-201ENST00000505249 PPP6R1Q9UPN7 881 aa11.95□□□□□ -0.5
SNX18P24-201ENST00000505249 ADRA2BP18089 450 aa11.93□□□□□ -0.5
SNX18P24-201ENST00000505249 SMARCA4P51532 1647 aa11.93□□□□□ -0.5
SNX18P24-201ENST00000505249 BAZ1AQ9NRL2 1556 aaPredicted RBP11.86□□□□□ -0.51
SNX18P24-201ENST00000505249 SMARCA2P51531 1590 aa11.83□□□□□ -0.52
SNX18P24-201ENST00000505249 ATAD2BQ9ULI0 1458 aa11.83□□□□□ -0.52
SNX18P24-201ENST00000505249 MROH2BQ7Z745 1585 aa11.81□□□□□ -0.52
SNX18P24-201ENST00000505249 NCAPD3P42695 1498 aa11.79□□□□□ -0.52
SNX18P24-201ENST00000505249 BAZ1BQ9UIG0 1483 aaKnown RBP11.78□□□□□ -0.52
SNX18P24-201ENST00000505249 HMGXB3Q12766 1538 aa11.76□□□□□ -0.53
SNX18P24-201ENST00000505249 WIZO95785 1651 aa11.75□□□□□ -0.53
SNX18P24-201ENST00000505249 PEG3Q9GZU2 1588 aa11.71□□□□□ -0.54
SNX18P24-201ENST00000505249 ERCC6Q03468 1493 aa11.7□□□□□ -0.54
SNX18P24-201ENST00000505249 NESP48681 1621 aa11.68□□□□□ -0.54
SNX18P24-201ENST00000505249 RSF1Q96T23 1441 aaPredicted RBP11.6□□□□□ -0.55
SNX18P24-201ENST00000505249 KIF21AQ7Z4S6 1674 aa11.59□□□□□ -0.55
SNX18P24-201ENST00000505249 LAMC3Q9Y6N6 1575 aa11.56□□□□□ -0.56
SNX18P24-201ENST00000505249 TOP2AP11388 1531 aaKnown RBP11.54□□□□□ -0.56
SNX18P24-201ENST00000505249 PIAS4Q8N2W9 510 aaPredicted RBP11.51□□□□□ -0.57
SNX18P24-201ENST00000505249 THOC2Q8NI27 1593 aaKnown RBP11.5□□□□□ -0.57
SNX18P24-201ENST00000505249 CUX2O14529 1486 aa11.49□□□□□ -0.57
SNX18P24-201ENST00000505249 CADPSQ9ULU8 1353 aa11.48□□□□□ -0.57
SNX18P24-201ENST00000505249 PDS5BQ9NTI5 1447 aa11.47□□□□□ -0.57
SNX18P24-201ENST00000505249 KCNA4P22459 653 aa11.45□□□□□ -0.58
SNX18P24-201ENST00000505249 PRDM2Q13029 1718 aa11.43□□□□□ -0.58
SNX18P24-201ENST00000505249 FANCD2Q9BXW9 1451 aa11.4□□□□□ -0.58
SNX18P24-201ENST00000505249 CEP164Q9UPV0 1460 aa11.4□□□□□ -0.58
SNX18P24-201ENST00000505249 CCDC88BA6NC98 1476 aa11.39□□□□□ -0.59
SNX18P24-201ENST00000505249 MRC2Q9UBG0 1479 aa11.39□□□□□ -0.59
SNX18P24-201ENST00000505249 CFTRP13569 1480 aa11.38□□□□□ -0.59
SNX18P24-201ENST00000505249 SUPT5HO00267 1087 aaKnown RBP11.37□□□□□ -0.59
SNX18P24-201ENST00000505249 WDR62O43379 1518 aa11.35□□□□□ -0.59
SNX18P24-201ENST00000505249 PPP4R3CPQ6ZMV5 832 aa11.31□□□□□ -0.6
SNX18P24-201ENST00000505249 URB2Q14146 1524 aaKnown RBP11.29□□□□□ -0.6
SNX18P24-201ENST00000505249 DNAJC5Q9H3Z4 198 aa11.27□□□□□ -0.61
SNX18P24-201ENST00000505249 TOPBP1Q92547 1522 aa11.2□□□□□ -0.62
SNX18P24-201ENST00000505249 DNMBPQ6XZF7 1577 aa11.19□□□□□ -0.62
SNX18P24-201ENST00000505249 ZNF608Q9ULD9 1512 aaPredicted RBP11.14□□□□□ -0.63
SNX18P24-201ENST00000505249 IFT140Q96RY7 1462 aa11.13□□□□□ -0.63
SNX18P24-201ENST00000505249 ABCC8Q09428 1581 aa11.13□□□□□ -0.63
SNX18P24-201ENST00000505249 NCBP3Q53F19 620 aaKnown RBP11.13□□□□□ -0.63
SNX18P24-201ENST00000505249 EIF4G3O43432 1585 aaKnown RBP11.12□□□□□ -0.63
SNX18P24-201ENST00000505249 RAD54L2Q9Y4B4 1467 aa11.1□□□□□ -0.63
SNX18P24-201ENST00000505249 POLA1P09884 1462 aaPredicted RBP11.09□□□□□ -0.63
SNX18P24-201ENST00000505249 TARBP1Q13395 1621 aaKnown RBP11.09□□□□□ -0.63
SNX18P24-201ENST00000505249 CUX1P39880 1505 aa11.09□□□□□ -0.63
SNX18P24-201ENST00000505249 FGD5Q6ZNL6 1462 aa11.08□□□□□ -0.64
SNX18P24-201ENST00000505249 MSH5O43196 834 aa11.08□□□□□ -0.64
SNX18P24-201ENST00000505249 AQRO60306 1485 aaKnown RBP eCLIP11.07□□□□□ -0.64
SNX18P24-201ENST00000505249 CHD1O14646 1710 aa11.07□□□□□ -0.64
SNX18P24-201ENST00000505249 SOGA1O94964 1423 aa11.05□□□□□ -0.64
SNX18P24-201ENST00000505249 FBLN2P98095 1184 aa11.04□□□□□ -0.64
SNX18P24-201ENST00000505249 TDRD9Q8NDG6 1382 aaKnown RBP11.03□□□□□ -0.64
SNX18P24-201ENST00000505249 OSCARQ8IYS5 282 aa11.03□□□□□ -0.64
SNX18P24-201ENST00000505249 EHMT2Q96KQ7 1210 aa11.03□□□□□ -0.64
SNX18P24-201ENST00000505249 TRIM41Q8WV44 630 aa11.02□□□□□ -0.65
SNX18P24-201ENST00000505249 WDR97A6NE52 1622 aa11.01□□□□□ -0.65
SNX18P24-201ENST00000505249 PBRM1Q86U86 1689 aa11.01□□□□□ -0.65
SNX18P24-201ENST00000505249 SYNJ1O43426 1573 aa10.99□□□□□ -0.65
SNX18P24-201ENST00000505249 SLC4A1APQ9BWU0 796 aaKnown RBP10.98□□□□□ -0.65
SNX18P24-201ENST00000505249 NPM3O75607 178 aaKnown RBP10.97□□□□□ -0.65
SNX18P24-201ENST00000505249 WRNQ14191 1432 aaPredicted RBP eCLIP10.97□□□□□ -0.65
SNX18P24-201ENST00000505249 SNAPC4Q5SXM2 1469 aa10.97□□□□□ -0.65
SNX18P24-201ENST00000505249 BIVM-ERCC5R4GMW8 1640 aa10.97□□□□□ -0.65
SNX18P24-201ENST00000505249 SCAF1Q9H7N4 1312 aaKnown RBP10.96□□□□□ -0.65
SNX18P24-201ENST00000505249 TOP2BQ02880 1626 aa10.95□□□□□ -0.66
SNX18P24-201ENST00000505249 CNKSR2Q8WXI2 1034 aa10.94□□□□□ -0.66
SNX18P24-201ENST00000505249 RIMBP3CA6NJZ7 1639 aa10.94□□□□□ -0.66
SNX18P24-201ENST00000505249 RIMBP3BA6NNM3 1639 aa10.94□□□□□ -0.66
SNX18P24-201ENST00000505249 RIMBP3Q9UFD9 1639 aa10.94□□□□□ -0.66
SNX18P24-201ENST00000505249 GAPVD1Q14C86 1478 aa10.93□□□□□ -0.66
SNX18P24-201ENST00000505249 ABCA5Q8WWZ7 1642 aa10.92□□□□□ -0.66
SNX18P24-201ENST00000505249 CHMP7Q8WUX9 453 aaPredicted RBP10.92□□□□□ -0.66
SNX18P24-201ENST00000505249 GRIN2BQ13224 1484 aa10.92□□□□□ -0.66
SNX18P24-201ENST00000505249 ABCA10Q8WWZ4 1543 aa10.9□□□□□ -0.66
SNX18P24-201ENST00000505249 MAGI1Q96QZ7 1491 aaPredicted RBP10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms