RNA–Protein interactions for RNA: ENST00000505243.5

RPS3A-203, Transcript of ribosomal protein S3A, humanhuman

TSL 3

Gene RPS3A, Length 614 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3A-203ENST00000505243 NISCHQ9Y2I1 1504 aa46.87■■■■■ 5.09
RPS3A-203ENST00000505243 CCDC180Q9P1Z9 1646 aa41.91■■■■■ 4.3
RPS3A-203ENST00000505243 ABCC9O60706 1549 aa41.66■■■■■ 4.26
RPS3A-203ENST00000505243 RB1CC1Q8TDY2 1594 aa39.74■■■■□ 3.95
RPS3A-203ENST00000505243 NACADO15069 1562 aa39.55■■■■□ 3.92
RPS3A-203ENST00000505243 DCAF8L2P0C7V8 631 aa39.29■■■■□ 3.88
RPS3A-203ENST00000505243 MYO15BQ96JP2 1530 aa39.12■■■■□ 3.85
RPS3A-203ENST00000505243 ZCCHC6Q5VYS8 1495 aaKnown RBP38.93■■■■□ 3.82
RPS3A-203ENST00000505243 UNC13AQ9UPW8 1703 aa38.9■■■■□ 3.82
RPS3A-203ENST00000505243 DNAJC5BQ9UF47 199 aa38.88■■■■□ 3.81
RPS3A-203ENST00000505243 PABPN1Q86U42 306 aaKnown RBP eCLIP38.81■■■■□ 3.8
RPS3A-203ENST00000505243 DCAF1Q9Y4B6 1507 aa38.73■■■■□ 3.79
RPS3A-203ENST00000505243 BICRAQ9NZM4 1560 aa38.68■■■■□ 3.78
RPS3A-203ENST00000505243 SCRIBQ14160 1630 aa38.23■■■■□ 3.71
RPS3A-203ENST00000505243 SHROOM4Q9ULL8 1493 aa38.1■■■■□ 3.69
RPS3A-203ENST00000505243 EIF4G1Q04637 1599 aaKnown RBP37.66■■■■□ 3.62
RPS3A-203ENST00000505243 CC2D2AQ9P2K1 1620 aa37.65■■■■□ 3.62
RPS3A-203ENST00000505243 CECR2Q9BXF3 1484 aa37.49■■■■□ 3.59
RPS3A-203ENST00000505243 NCAPD3P42695 1498 aa36.53■■■■□ 3.44
RPS3A-203ENST00000505243 SMARCA4P51532 1647 aa36.51■■■■□ 3.43
RPS3A-203ENST00000505243 ATAD2BQ9ULI0 1458 aa36.47■■■■□ 3.43
RPS3A-203ENST00000505243 SMARCA2P51531 1590 aa36.33■■■■□ 3.41
RPS3A-203ENST00000505243 BAZ1AQ9NRL2 1556 aaPredicted RBP36.33■■■■□ 3.41
RPS3A-203ENST00000505243 HMGXB3Q12766 1538 aa36.29■■■■□ 3.4
RPS3A-203ENST00000505243 PEG3Q9GZU2 1588 aa36.16■■■■□ 3.38
RPS3A-203ENST00000505243 MROH2BQ7Z745 1585 aa36.15■■■■□ 3.38
RPS3A-203ENST00000505243 BAZ1BQ9UIG0 1483 aaKnown RBP36.09■■■■□ 3.37
RPS3A-203ENST00000505243 NESP48681 1621 aa35.9■■■■□ 3.34
RPS3A-203ENST00000505243 ERCC6Q03468 1493 aa35.88■■■■□ 3.33
RPS3A-203ENST00000505243 CUX2O14529 1486 aa35.77■■■■□ 3.32
RPS3A-203ENST00000505243 WIZO95785 1651 aa35.7■■■■□ 3.31
RPS3A-203ENST00000505243 LAMC3Q9Y6N6 1575 aa35.64■■■■□ 3.3
RPS3A-203ENST00000505243 THOC2Q8NI27 1593 aaKnown RBP35.51■■■■□ 3.27
RPS3A-203ENST00000505243 RSF1Q96T23 1441 aaPredicted RBP35.48■■■■□ 3.27
RPS3A-203ENST00000505243 KIF21AQ7Z4S6 1674 aa35.43■■■■□ 3.26
RPS3A-203ENST00000505243 CADPSQ9ULU8 1353 aa35.41■■■■□ 3.26
RPS3A-203ENST00000505243 DNAJC5Q9H3Z4 198 aa35.41■■■■□ 3.26
RPS3A-203ENST00000505243 PDS5BQ9NTI5 1447 aa35.39■■■■□ 3.26
RPS3A-203ENST00000505243 TOP2AP11388 1531 aaKnown RBP35.27■■■■□ 3.24
RPS3A-203ENST00000505243 MRC2Q9UBG0 1479 aa35.11■■■■□ 3.21
RPS3A-203ENST00000505243 CFTRP13569 1480 aa35.09■■■■□ 3.21
RPS3A-203ENST00000505243 WDR62O43379 1518 aa35.06■■■■□ 3.2
RPS3A-203ENST00000505243 FANCD2Q9BXW9 1451 aa35.02■■■■□ 3.2
RPS3A-203ENST00000505243 CEP164Q9UPV0 1460 aa35.02■■■■□ 3.2
RPS3A-203ENST00000505243 CCDC88BA6NC98 1476 aa34.86■■■■□ 3.17
RPS3A-203ENST00000505243 URB2Q14146 1524 aaKnown RBP34.76■■■■□ 3.15
RPS3A-203ENST00000505243 PRDM2Q13029 1718 aa34.73■■■■□ 3.15
RPS3A-203ENST00000505243 TOPBP1Q92547 1522 aa34.4■■■■□ 3.1
RPS3A-203ENST00000505243 IFT140Q96RY7 1462 aa34.31■■■■□ 3.08
RPS3A-203ENST00000505243 DNMBPQ6XZF7 1577 aa34.3■■■■□ 3.08
RPS3A-203ENST00000505243 ZNF608Q9ULD9 1512 aaPredicted RBP34.29■■■■□ 3.08
RPS3A-203ENST00000505243 ABCC8Q09428 1581 aa34.27■■■■□ 3.08
RPS3A-203ENST00000505243 TARBP1Q13395 1621 aaKnown RBP34.11■■■■□ 3.05
RPS3A-203ENST00000505243 OSCARQ8IYS5 282 aa34.1■■■■□ 3.05
RPS3A-203ENST00000505243 EIF4G3O43432 1585 aaKnown RBP34.1■■■■□ 3.05
RPS3A-203ENST00000505243 POLA1P09884 1462 aaPredicted RBP34.08■■■■□ 3.05
RPS3A-203ENST00000505243 SUPT5HO00267 1087 aaKnown RBP34.01■■■■□ 3.03
RPS3A-203ENST00000505243 AQRO60306 1485 aaKnown RBP eCLIP33.98■■■■□ 3.035e-10■■■■■ 32.4
RPS3A-203ENST00000505243 RAD54L2Q9Y4B4 1467 aa33.95■■■■□ 3.03
RPS3A-203ENST00000505243 CUX1P39880 1505 aa33.94■■■■□ 3.02
RPS3A-203ENST00000505243 TRIM41Q8WV44 630 aa33.94■■■■□ 3.02
RPS3A-203ENST00000505243 FGD5Q6ZNL6 1462 aa33.89■■■■□ 3.02
RPS3A-203ENST00000505243 SOGA1O94964 1423 aa33.87■■■■□ 3.01
RPS3A-203ENST00000505243 TDRD9Q8NDG6 1382 aaKnown RBP33.79■■■■□ 3
RPS3A-203ENST00000505243 CHD1O14646 1710 aa33.76■■■■□ 3
RPS3A-203ENST00000505243 RIMBP3CA6NJZ7 1639 aa33.74■■■□□ 2.99
RPS3A-203ENST00000505243 RIMBP3BA6NNM3 1639 aa33.74■■■□□ 2.99
RPS3A-203ENST00000505243 RIMBP3Q9UFD9 1639 aa33.74■■■□□ 2.99
RPS3A-203ENST00000505243 WDR97A6NE52 1622 aa33.72■■■□□ 2.99
RPS3A-203ENST00000505243 ARHGEF11O15085 1522 aa33.66■■■□□ 2.98
RPS3A-203ENST00000505243 SNAPC4Q5SXM2 1469 aa33.65■■■□□ 2.98
RPS3A-203ENST00000505243 FBLN2P98095 1184 aa33.59■■■□□ 2.97
RPS3A-203ENST00000505243 GRIN2BQ13224 1484 aa33.56■■■□□ 2.96
RPS3A-203ENST00000505243 MAGI1Q96QZ7 1491 aaPredicted RBP33.54■■■□□ 2.96
RPS3A-203ENST00000505243 ABCA10Q8WWZ4 1543 aa33.53■■■□□ 2.96
RPS3A-203ENST00000505243 ABCA5Q8WWZ7 1642 aa33.49■■■□□ 2.95
RPS3A-203ENST00000505243 GAPVD1Q14C86 1478 aa33.48■■■□□ 2.95
RPS3A-203ENST00000505243 PBRM1Q86U86 1689 aa33.47■■■□□ 2.95
RPS3A-203ENST00000505243 SYNJ1O43426 1573 aa33.45■■■□□ 2.95
RPS3A-203ENST00000505243 BIVM-ERCC5R4GMW8 1640 aa33.45■■■□□ 2.95
RPS3A-203ENST00000505243 TOP2BQ02880 1626 aa33.44■■■□□ 2.94
RPS3A-203ENST00000505243 CLASP1Q7Z460 1538 aa33.43■■■□□ 2.94
RPS3A-203ENST00000505243 SYNJ2O15056 1496 aa33.43■■■□□ 2.94
RPS3A-203ENST00000505243 WRNQ14191 1432 aaPredicted RBP eCLIP33.42■■■□□ 2.94
RPS3A-203ENST00000505243 CHMP7Q8WUX9 453 aaPredicted RBP33.39■■■□□ 2.94
RPS3A-203ENST00000505243 ARAP1Q96P48 1450 aa33.37■■■□□ 2.93
RPS3A-203ENST00000505243 CYB5RLQ6IPT4 315 aa33.31■■■□□ 2.92
RPS3A-203ENST00000505243 ADAMTS12P58397 1594 aa33.21■■■□□ 2.91
RPS3A-203ENST00000505243 GRIN2AQ12879 1464 aa33.16■■■□□ 2.9
RPS3A-203ENST00000505243 ERICH3Q5RHP9 1530 aa33.09■■■□□ 2.89
RPS3A-203ENST00000505243 FHAD1B1AJZ9 1412 aa33.07■■■□□ 2.88
RPS3A-203ENST00000505243 CEP170Q5SW79 1584 aa33.06■■■□□ 2.88
RPS3A-203ENST00000505243 NUP160Q12769 1436 aa33.05■■■□□ 2.88
RPS3A-203ENST00000505243 ERCC6L2Q5T890 1561 aa32.96■■■□□ 2.87
RPS3A-203ENST00000505243 SHROOM2Q13796 1616 aa32.88■■■□□ 2.85
RPS3A-203ENST00000505243 TRHP20396 242 aaPredicted RBP32.8■■■□□ 2.84
RPS3A-203ENST00000505243 IGF1RP08069 1367 aa32.74■■■□□ 2.83
RPS3A-203ENST00000505243 RUSC2Q8N2Y8 1516 aa32.74■■■□□ 2.83
RPS3A-203ENST00000505243 KIF27Q86VH2 1401 aa32.74■■■□□ 2.83
RPS3A-203ENST00000505243 PRG4Q92954 1404 aaPredicted RBP32.67■■■□□ 2.82
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms