RNA–Protein interactions for RNA: ENST00000505220.1

RBM47-204, Transcript of RNA binding motif protein 47, humanhuman

TSL 2

Gene RBM47, Length 741 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM47-204ENST00000505220 NISCHQ9Y2I1 1504 aa43.32■■■■■ 4.53
RBM47-204ENST00000505220 ABCC9O60706 1549 aa39.84■■■■□ 3.97
RBM47-204ENST00000505220 CCDC180Q9P1Z9 1646 aa39.17■■■■□ 3.86
RBM47-204ENST00000505220 DNAJC5BQ9UF47 199 aa37.88■■■■□ 3.65
RBM47-204ENST00000505220 RB1CC1Q8TDY2 1594 aa37.65■■■■□ 3.62
RBM47-204ENST00000505220 NACADO15069 1562 aa37.21■■■■□ 3.55
RBM47-204ENST00000505220 PABPN1Q86U42 306 aaKnown RBP eCLIP37■■■■□ 3.51
RBM47-204ENST00000505220 DCAF8L2P0C7V8 631 aa36.97■■■■□ 3.51
RBM47-204ENST00000505220 UNC13AQ9UPW8 1703 aa36.66■■■■□ 3.46
RBM47-204ENST00000505220 BICRAQ9NZM4 1560 aa36.48■■■■□ 3.43
RBM47-204ENST00000505220 MYO15BQ96JP2 1530 aa36.46■■■■□ 3.43
RBM47-204ENST00000505220 SHROOM4Q9ULL8 1493 aa36.04■■■■□ 3.36
RBM47-204ENST00000505220 CECR2Q9BXF3 1484 aa35.99■■■■□ 3.35
RBM47-204ENST00000505220 CC2D2AQ9P2K1 1620 aa35.93■■■■□ 3.34
RBM47-204ENST00000505220 ZCCHC6Q5VYS8 1495 aaKnown RBP35.77■■■■□ 3.32
RBM47-204ENST00000505220 DCAF1Q9Y4B6 1507 aa35.75■■■■□ 3.31
RBM47-204ENST00000505220 EIF4G1Q04637 1599 aaKnown RBP35.7■■■■□ 3.31
RBM47-204ENST00000505220 SCRIBQ14160 1630 aa35.67■■■■□ 3.3
RBM47-204ENST00000505220 DNAJC5Q9H3Z4 198 aa35.35■■■■□ 3.25
RBM47-204ENST00000505220 CUX2O14529 1486 aa34.65■■■■□ 3.14
RBM47-204ENST00000505220 ERCC6Q03468 1493 aa34.53■■■■□ 3.12
RBM47-204ENST00000505220 NCAPD3P42695 1498 aa34.34■■■■□ 3.09
RBM47-204ENST00000505220 ATAD2BQ9ULI0 1458 aa34.14■■■■□ 3.06
RBM47-204ENST00000505220 SMARCA2P51531 1590 aa34.06■■■■□ 3.04
RBM47-204ENST00000505220 HMGXB3Q12766 1538 aa34.04■■■■□ 3.04
RBM47-204ENST00000505220 NESP48681 1621 aa34■■■■□ 3.03
RBM47-204ENST00000505220 SMARCA4P51532 1647 aa33.94■■■■□ 3.02
RBM47-204ENST00000505220 BAZ1BQ9UIG0 1483 aaKnown RBP33.83■■■■□ 3.01
RBM47-204ENST00000505220 THOC2Q8NI27 1593 aaKnown RBP33.79■■■■□ 3
RBM47-204ENST00000505220 BAZ1AQ9NRL2 1556 aaPredicted RBP33.72■■■□□ 2.99
RBM47-204ENST00000505220 LAMC3Q9Y6N6 1575 aa33.7■■■□□ 2.99
RBM47-204ENST00000505220 PEG3Q9GZU2 1588 aa33.6■■■□□ 2.97
RBM47-204ENST00000505220 TRIM41Q8WV44 630 aa33.59■■■□□ 2.97
RBM47-204ENST00000505220 PDS5BQ9NTI5 1447 aa33.59■■■□□ 2.97
RBM47-204ENST00000505220 KIF21AQ7Z4S6 1674 aa33.52■■■□□ 2.96
RBM47-204ENST00000505220 MROH2BQ7Z745 1585 aa33.35■■■□□ 2.93
RBM47-204ENST00000505220 CADPSQ9ULU8 1353 aa33.3■■■□□ 2.92
RBM47-204ENST00000505220 MRC2Q9UBG0 1479 aa33.3■■■□□ 2.92
RBM47-204ENST00000505220 WDR62O43379 1518 aa33.21■■■□□ 2.91
RBM47-204ENST00000505220 CEP164Q9UPV0 1460 aa33.05■■■□□ 2.88
RBM47-204ENST00000505220 OSCARQ8IYS5 282 aa32.97■■■□□ 2.87
RBM47-204ENST00000505220 FANCD2Q9BXW9 1451 aa32.93■■■□□ 2.86
RBM47-204ENST00000505220 WIZO95785 1651 aa32.92■■■□□ 2.86
RBM47-204ENST00000505220 CFTRP13569 1480 aa32.76■■■□□ 2.84
RBM47-204ENST00000505220 URB2Q14146 1524 aaKnown RBP32.66■■■□□ 2.82
RBM47-204ENST00000505220 RIMBP3CA6NJZ7 1639 aa32.55■■■□□ 2.8
RBM47-204ENST00000505220 RIMBP3BA6NNM3 1639 aa32.55■■■□□ 2.8
RBM47-204ENST00000505220 RIMBP3Q9UFD9 1639 aa32.55■■■□□ 2.8
RBM47-204ENST00000505220 TOP2AP11388 1531 aaKnown RBP32.5■■■□□ 2.79
RBM47-204ENST00000505220 RSF1Q96T23 1441 aaPredicted RBP32.43■■■□□ 2.78
RBM47-204ENST00000505220 IFT140Q96RY7 1462 aa32.41■■■□□ 2.78
RBM47-204ENST00000505220 ARHGEF11O15085 1522 aa32.41■■■□□ 2.78
RBM47-204ENST00000505220 ZNF608Q9ULD9 1512 aaPredicted RBP32.36■■■□□ 2.77
RBM47-204ENST00000505220 PRDM2Q13029 1718 aa32.33■■■□□ 2.77
RBM47-204ENST00000505220 CYB5RLQ6IPT4 315 aa32.24■■■□□ 2.75
RBM47-204ENST00000505220 TOPBP1Q92547 1522 aa32.21■■■□□ 2.75
RBM47-204ENST00000505220 EIF4G3O43432 1585 aaKnown RBP32.17■■■□□ 2.74
RBM47-204ENST00000505220 TRHP20396 242 aaPredicted RBP32.16■■■□□ 2.74
RBM47-204ENST00000505220 ABCC8Q09428 1581 aa32.15■■■□□ 2.74
RBM47-204ENST00000505220 CCDC88BA6NC98 1476 aa32.12■■■□□ 2.73
RBM47-204ENST00000505220 DNMBPQ6XZF7 1577 aa32.04■■■□□ 2.72
RBM47-204ENST00000505220 ARAP1Q96P48 1450 aa32.03■■■□□ 2.72
RBM47-204ENST00000505220 FBLN2P98095 1184 aa32.02■■■□□ 2.72
RBM47-204ENST00000505220 CHD1O14646 1710 aa32.02■■■□□ 2.72
RBM47-204ENST00000505220 AQRO60306 1485 aaKnown RBP eCLIP32.01■■■□□ 2.71
RBM47-204ENST00000505220 TARBP1Q13395 1621 aaKnown RBP31.93■■■□□ 2.7
RBM47-204ENST00000505220 POLA1P09884 1462 aaPredicted RBP31.84■■■□□ 2.69
RBM47-204ENST00000505220 AEBP2Q6ZN18 517 aaPredicted RBP31.75■■■□□ 2.67
RBM47-204ENST00000505220 RAD54L2Q9Y4B4 1467 aa31.72■■■□□ 2.67
RBM47-204ENST00000505220 TDRD9Q8NDG6 1382 aaKnown RBP31.71■■■□□ 2.67
RBM47-204ENST00000505220 SOGA1O94964 1423 aa31.71■■■□□ 2.67
RBM47-204ENST00000505220 SNAPC4Q5SXM2 1469 aa31.69■■■□□ 2.66
RBM47-204ENST00000505220 CHMP7Q8WUX9 453 aaPredicted RBP31.67■■■□□ 2.66
RBM47-204ENST00000505220 CLASP1Q7Z460 1538 aa31.65■■■□□ 2.66
RBM47-204ENST00000505220 SYNJ1O43426 1573 aa31.65■■■□□ 2.66
RBM47-204ENST00000505220 WDR97A6NE52 1622 aa31.64■■■□□ 2.65
RBM47-204ENST00000505220 MAGI1Q96QZ7 1491 aaPredicted RBP31.59■■■□□ 2.65
RBM47-204ENST00000505220 FGD5Q6ZNL6 1462 aa31.55■■■□□ 2.64
RBM47-204ENST00000505220 GRIN2BQ13224 1484 aa31.52■■■□□ 2.64
RBM47-204ENST00000505220 SYNJ2O15056 1496 aa31.49■■■□□ 2.63
RBM47-204ENST00000505220 GAPVD1Q14C86 1478 aa31.41■■■□□ 2.62
RBM47-204ENST00000505220 CUX1P39880 1505 aa31.39■■■□□ 2.61
RBM47-204ENST00000505220 PBRM1Q86U86 1689 aa31.29■■■□□ 2.6
RBM47-204ENST00000505220 ABCA10Q8WWZ4 1543 aa31.15■■■□□ 2.58
RBM47-204ENST00000505220 ABCA5Q8WWZ7 1642 aa31.14■■■□□ 2.58
RBM47-204ENST00000505220 GRIN2AQ12879 1464 aa31.09■■■□□ 2.57
RBM47-204ENST00000505220 ERCC6L2Q5T890 1561 aa31.09■■■□□ 2.57
RBM47-204ENST00000505220 CEP170Q5SW79 1584 aa31.03■■■□□ 2.56
RBM47-204ENST00000505220 NUP160Q12769 1436 aa30.99■■■□□ 2.55
RBM47-204ENST00000505220 ADAMTS12P58397 1594 aa30.98■■■□□ 2.55
RBM47-204ENST00000505220 WRNQ14191 1432 aaPredicted RBP eCLIP30.95■■■□□ 2.54
RBM47-204ENST00000505220 SHROOM2Q13796 1616 aa30.91■■■□□ 2.54
RBM47-204ENST00000505220 FHAD1B1AJZ9 1412 aa30.9■■■□□ 2.54
RBM47-204ENST00000505220 KIF13AQ9H1H9 1805 aa30.82■■■□□ 2.52
RBM47-204ENST00000505220 PRG4Q92954 1404 aaPredicted RBP30.79■■■□□ 2.52
RBM47-204ENST00000505220 ERICH3Q5RHP9 1530 aa30.77■■■□□ 2.52
RBM47-204ENST00000505220 NPM1P06748 294 aaKnown RBP eCLIP30.73■■■□□ 2.51
RBM47-204ENST00000505220 FAM69CQ0P6D2 419 aa30.73■■■□□ 2.51
RBM47-204ENST00000505220 TOP2BQ02880 1626 aa30.72■■■□□ 2.51
RBM47-204ENST00000505220 JPH4Q96JJ6 628 aa30.71■■■□□ 2.51
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms