RNA–Protein interactions for RNA: ENST00000505064.1

CCND3-207, Transcript of cyclin D3, humanhuman

TSL 2

Gene CCND3, Length 540 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND3-207ENST00000505064 NISCHQ9Y2I1 1504 aa32.74■■■□□ 2.83
CCND3-207ENST00000505064 CCDC180Q9P1Z9 1646 aa29.18■■■□□ 2.26
CCND3-207ENST00000505064 ABCC9O60706 1549 aa28.54■■■□□ 2.16
CCND3-207ENST00000505064 RB1CC1Q8TDY2 1594 aa27.47■■□□□ 1.99
CCND3-207ENST00000505064 NACADO15069 1562 aa27.43■■□□□ 1.98
CCND3-207ENST00000505064 DCAF8L2P0C7V8 631 aa27.41■■□□□ 1.98
CCND3-207ENST00000505064 ZCCHC6Q5VYS8 1495 aaKnown RBP27.24■■□□□ 1.95
CCND3-207ENST00000505064 MYO15BQ96JP2 1530 aa27.23■■□□□ 1.95
CCND3-207ENST00000505064 DCAF1Q9Y4B6 1507 aa27.1■■□□□ 1.93
CCND3-207ENST00000505064 UNC13AQ9UPW8 1703 aa26.93■■□□□ 1.9
CCND3-207ENST00000505064 PABPN1Q86U42 306 aaKnown RBP eCLIP26.67■■□□□ 1.86
CCND3-207ENST00000505064 DNAJC5BQ9UF47 199 aa26.67■■□□□ 1.86
CCND3-207ENST00000505064 BICRAQ9NZM4 1560 aa26.63■■□□□ 1.85
CCND3-207ENST00000505064 SCRIBQ14160 1630 aa26.57■■□□□ 1.84
CCND3-207ENST00000505064 SHROOM4Q9ULL8 1493 aa26.32■■□□□ 1.8
CCND3-207ENST00000505064 EIF4G1Q04637 1599 aaKnown RBP25.93■■□□□ 1.74
CCND3-207ENST00000505064 CC2D2AQ9P2K1 1620 aa25.85■■□□□ 1.73
CCND3-207ENST00000505064 CECR2Q9BXF3 1484 aa25.66■■□□□ 1.7
CCND3-207ENST00000505064 SMARCA4P51532 1647 aa25.43■■□□□ 1.66
CCND3-207ENST00000505064 BAZ1AQ9NRL2 1556 aaPredicted RBP25.39■■□□□ 1.65
CCND3-207ENST00000505064 NCAPD3P42695 1498 aa25.28■■□□□ 1.64
CCND3-207ENST00000505064 ATAD2BQ9ULI0 1458 aa25.28■■□□□ 1.64
CCND3-207ENST00000505064 SMARCA2P51531 1590 aa25.27■■□□□ 1.64
CCND3-207ENST00000505064 MROH2BQ7Z745 1585 aa25.22■■□□□ 1.63
CCND3-207ENST00000505064 PEG3Q9GZU2 1588 aa25.18■■□□□ 1.62
CCND3-207ENST00000505064 HMGXB3Q12766 1538 aa25.16■■□□□ 1.62
CCND3-207ENST00000505064 BAZ1BQ9UIG0 1483 aaKnown RBP25.08■■□□□ 1.6
CCND3-207ENST00000505064 WIZO95785 1651 aa24.99■■□□□ 1.59
CCND3-207ENST00000505064 RSF1Q96T23 1441 aaPredicted RBP24.91■■□□□ 1.58
CCND3-207ENST00000505064 DNAJC5Q9H3Z4 198 aa24.7■■□□□ 1.54
CCND3-207ENST00000505064 NESP48681 1621 aa24.68■■□□□ 1.54
CCND3-207ENST00000505064 TOP2AP11388 1531 aaKnown RBP24.68■■□□□ 1.54
CCND3-207ENST00000505064 LAMC3Q9Y6N6 1575 aa24.65■■□□□ 1.54
CCND3-207ENST00000505064 ERCC6Q03468 1493 aa24.61■■□□□ 1.53
CCND3-207ENST00000505064 CADPSQ9ULU8 1353 aa24.54■■□□□ 1.52
CCND3-207ENST00000505064 PDS5BQ9NTI5 1447 aa24.47■■□□□ 1.51
CCND3-207ENST00000505064 KIF21AQ7Z4S6 1674 aa24.46■■□□□ 1.51
CCND3-207ENST00000505064 CUX2O14529 1486 aa24.42■■□□□ 1.5
CCND3-207ENST00000505064 CCDC88BA6NC98 1476 aa24.4■■□□□ 1.5
CCND3-207ENST00000505064 CFTRP13569 1480 aa24.38■■□□□ 1.49
CCND3-207ENST00000505064 THOC2Q8NI27 1593 aaKnown RBP24.33■■□□□ 1.49
CCND3-207ENST00000505064 PRDM2Q13029 1718 aa24.3■■□□□ 1.48
CCND3-207ENST00000505064 FANCD2Q9BXW9 1451 aa24.26■■□□□ 1.47
CCND3-207ENST00000505064 SUPT5HO00267 1087 aaKnown RBP24.25■■□□□ 1.47
CCND3-207ENST00000505064 CEP164Q9UPV0 1460 aa24.24■■□□□ 1.47
CCND3-207ENST00000505064 MRC2Q9UBG0 1479 aa24.2■■□□□ 1.47
CCND3-207ENST00000505064 WDR62O43379 1518 aa24.14■■□□□ 1.45
CCND3-207ENST00000505064 URB2Q14146 1524 aaKnown RBP24.01■■□□□ 1.43
CCND3-207ENST00000505064 ABCC8Q09428 1581 aa23.9■■□□□ 1.42
CCND3-207ENST00000505064 TOPBP1Q92547 1522 aa23.87■■□□□ 1.41
CCND3-207ENST00000505064 DNMBPQ6XZF7 1577 aa23.85■■□□□ 1.41
CCND3-207ENST00000505064 IFT140Q96RY7 1462 aa23.73■■□□□ 1.39
CCND3-207ENST00000505064 CUX1P39880 1505 aa23.67■■□□□ 1.38
CCND3-207ENST00000505064 POLA1P09884 1462 aaPredicted RBP23.65■■□□□ 1.38
CCND3-207ENST00000505064 TARBP1Q13395 1621 aaKnown RBP23.63■■□□□ 1.37
CCND3-207ENST00000505064 ZNF608Q9ULD9 1512 aaPredicted RBP23.62■■□□□ 1.37
CCND3-207ENST00000505064 FGD5Q6ZNL6 1462 aa23.59■■□□□ 1.37
CCND3-207ENST00000505064 SOGA1O94964 1423 aa23.58■■□□□ 1.36
CCND3-207ENST00000505064 RAD54L2Q9Y4B4 1467 aa23.56■■□□□ 1.36
CCND3-207ENST00000505064 EIF4G3O43432 1585 aaKnown RBP23.54■■□□□ 1.36
CCND3-207ENST00000505064 TRIM41Q8WV44 630 aa23.5■■□□□ 1.35
CCND3-207ENST00000505064 WRNQ14191 1432 aaPredicted RBP eCLIP23.49■■□□□ 1.359e-6■■■■■ 50.1
CCND3-207ENST00000505064 AQRO60306 1485 aaKnown RBP eCLIP23.49■■□□□ 1.353e-7■■■■■ 37.4
CCND3-207ENST00000505064 BIVM-ERCC5R4GMW8 1640 aa23.48■■□□□ 1.35
CCND3-207ENST00000505064 TOP2BQ02880 1626 aa23.47■■□□□ 1.35
CCND3-207ENST00000505064 WDR97A6NE52 1622 aa23.45■■□□□ 1.34
CCND3-207ENST00000505064 SYNJ1O43426 1573 aa23.44■■□□□ 1.34
CCND3-207ENST00000505064 TDRD9Q8NDG6 1382 aaKnown RBP23.43■■□□□ 1.34
CCND3-207ENST00000505064 OSCARQ8IYS5 282 aa23.4■■□□□ 1.34
CCND3-207ENST00000505064 ABCA10Q8WWZ4 1543 aa23.36■■□□□ 1.33
CCND3-207ENST00000505064 CHD1O14646 1710 aa23.31■■□□□ 1.32
CCND3-207ENST00000505064 PBRM1Q86U86 1689 aa23.31■■□□□ 1.32
CCND3-207ENST00000505064 GAPVD1Q14C86 1478 aa23.3■■□□□ 1.32
CCND3-207ENST00000505064 GRIN2BQ13224 1484 aa23.3■■□□□ 1.32
CCND3-207ENST00000505064 ABCA5Q8WWZ7 1642 aa23.29■■□□□ 1.32
CCND3-207ENST00000505064 SNAPC4Q5SXM2 1469 aa23.25■■□□□ 1.31
CCND3-207ENST00000505064 MAGI1Q96QZ7 1491 aaPredicted RBP23.24■■□□□ 1.31
CCND3-207ENST00000505064 FBLN2P98095 1184 aa23.23■■□□□ 1.31
CCND3-207ENST00000505064 CHMP7Q8WUX9 453 aaPredicted RBP23.17■■□□□ 1.3
CCND3-207ENST00000505064 SYNJ2O15056 1496 aa23.15■■□□□ 1.3
CCND3-207ENST00000505064 ERICH3Q5RHP9 1530 aa23.1■■□□□ 1.29
CCND3-207ENST00000505064 ADAMTS12P58397 1594 aa23.05■■□□□ 1.28
CCND3-207ENST00000505064 FHAD1B1AJZ9 1412 aa23.02■■□□□ 1.28
CCND3-207ENST00000505064 RIMBP3CA6NJZ7 1639 aa23.01■■□□□ 1.27
CCND3-207ENST00000505064 RIMBP3BA6NNM3 1639 aa23.01■■□□□ 1.27
CCND3-207ENST00000505064 RIMBP3Q9UFD9 1639 aa23.01■■□□□ 1.27
CCND3-207ENST00000505064 KIF27Q86VH2 1401 aa23.01■■□□□ 1.27
CCND3-207ENST00000505064 GRIN2AQ12879 1464 aa22.99■■□□□ 1.27
CCND3-207ENST00000505064 CLASP1Q7Z460 1538 aa22.99■■□□□ 1.27
CCND3-207ENST00000505064 ARHGEF11O15085 1522 aa22.98■■□□□ 1.27
CCND3-207ENST00000505064 IGF1RP08069 1367 aa22.92■■□□□ 1.26
CCND3-207ENST00000505064 CUL7Q14999 1698 aa22.9■■□□□ 1.26
CCND3-207ENST00000505064 NUP160Q12769 1436 aa22.89■■□□□ 1.25
CCND3-207ENST00000505064 CEP170Q5SW79 1584 aa22.88■■□□□ 1.25
CCND3-207ENST00000505064 CARMIL1Q5VZK9 1371 aa22.8■■□□□ 1.24
CCND3-207ENST00000505064 CYB5RLQ6IPT4 315 aa22.79■■□□□ 1.24
CCND3-207ENST00000505064 RUSC2Q8N2Y8 1516 aa22.78■■□□□ 1.24
CCND3-207ENST00000505064 ARAP1Q96P48 1450 aa22.77■■□□□ 1.24
CCND3-207ENST00000505064 SHROOM2Q13796 1616 aa22.75■■□□□ 1.23
CCND3-207ENST00000505064 JPH4Q96JJ6 628 aa22.69■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms