RNA–Protein interactions for RNA: ENST00000505005.5

NR1I3-220, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 985 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-220ENST00000505005 NISCHQ9Y2I1 1504 aa23.56■■□□□ 1.36
NR1I3-220ENST00000505005 CCDC180Q9P1Z9 1646 aa21.01■□□□□ 0.95
NR1I3-220ENST00000505005 ABCC9O60706 1549 aa20.35■□□□□ 0.85
NR1I3-220ENST00000505005 NACADO15069 1562 aa19.78■□□□□ 0.76
NR1I3-220ENST00000505005 RB1CC1Q8TDY2 1594 aa19.78■□□□□ 0.76
NR1I3-220ENST00000505005 MYO15BQ96JP2 1530 aa19.74■□□□□ 0.75
NR1I3-220ENST00000505005 DCAF8L2P0C7V8 631 aa19.69■□□□□ 0.74
NR1I3-220ENST00000505005 DCAF1Q9Y4B6 1507 aa19.61■□□□□ 0.73
NR1I3-220ENST00000505005 ZCCHC6Q5VYS8 1495 aaKnown RBP19.6■□□□□ 0.73
NR1I3-220ENST00000505005 AEBP2Q6ZN18 517 aaPredicted RBP19.27■□□□□ 0.68
NR1I3-220ENST00000505005 CHIC1Q5VXU3 224 aa19.25■□□□□ 0.67
NR1I3-220ENST00000505005 UNC13AQ9UPW8 1703 aa19.13■□□□□ 0.65
NR1I3-220ENST00000505005 SHROOM4Q9ULL8 1493 aa19.1■□□□□ 0.65
NR1I3-220ENST00000505005 PABPN1Q86U42 306 aaKnown RBP eCLIP19.01■□□□□ 0.63
NR1I3-220ENST00000505005 SCRIBQ14160 1630 aa18.99■□□□□ 0.63
NR1I3-220ENST00000505005 BICRAQ9NZM4 1560 aa18.98■□□□□ 0.63
NR1I3-220ENST00000505005 EIF4G1Q04637 1599 aaKnown RBP18.56■□□□□ 0.56
NR1I3-220ENST00000505005 DNAJC5BQ9UF47 199 aa18.55■□□□□ 0.56
NR1I3-220ENST00000505005 CC2D2AQ9P2K1 1620 aa18.45■□□□□ 0.54
NR1I3-220ENST00000505005 CECR2Q9BXF3 1484 aa18.37■□□□□ 0.53
NR1I3-220ENST00000505005 BAZ1AQ9NRL2 1556 aaPredicted RBP18.34■□□□□ 0.53
NR1I3-220ENST00000505005 SMARCA2P51531 1590 aa18.25■□□□□ 0.51
NR1I3-220ENST00000505005 SMARCA4P51532 1647 aa18.24■□□□□ 0.51
NR1I3-220ENST00000505005 NCAPD3P42695 1498 aa18.22■□□□□ 0.51
NR1I3-220ENST00000505005 ATAD2BQ9ULI0 1458 aa18.16■□□□□ 0.5
NR1I3-220ENST00000505005 PEG3Q9GZU2 1588 aa18.14■□□□□ 0.49
NR1I3-220ENST00000505005 HMGXB3Q12766 1538 aa18.13■□□□□ 0.49
NR1I3-220ENST00000505005 BAZ1BQ9UIG0 1483 aaKnown RBP18.06■□□□□ 0.48
NR1I3-220ENST00000505005 MROH2BQ7Z745 1585 aa18.05■□□□□ 0.48
NR1I3-220ENST00000505005 RSF1Q96T23 1441 aaPredicted RBP17.92■□□□□ 0.46
NR1I3-220ENST00000505005 WIZO95785 1651 aa17.85■□□□□ 0.45
NR1I3-220ENST00000505005 TOP2AP11388 1531 aaKnown RBP17.77■□□□□ 0.44
NR1I3-220ENST00000505005 LAMC3Q9Y6N6 1575 aa17.76■□□□□ 0.43
NR1I3-220ENST00000505005 CADPSQ9ULU8 1353 aa17.69■□□□□ 0.42
NR1I3-220ENST00000505005 PDS5BQ9NTI5 1447 aa17.69■□□□□ 0.42
NR1I3-220ENST00000505005 ERCC6Q03468 1493 aa17.69■□□□□ 0.42
NR1I3-220ENST00000505005 NESP48681 1621 aa17.56■□□□□ 0.4
NR1I3-220ENST00000505005 CFTRP13569 1480 aa17.56■□□□□ 0.4
NR1I3-220ENST00000505005 CUX2O14529 1486 aa17.54■□□□□ 0.4
NR1I3-220ENST00000505005 CCDC88BA6NC98 1476 aa17.52■□□□□ 0.4
NR1I3-220ENST00000505005 SUPT5HO00267 1087 aaKnown RBP17.49■□□□□ 0.39
NR1I3-220ENST00000505005 CEP164Q9UPV0 1460 aa17.44■□□□□ 0.38
NR1I3-220ENST00000505005 PRDM2Q13029 1718 aa17.44■□□□□ 0.38
NR1I3-220ENST00000505005 FANCD2Q9BXW9 1451 aa17.43■□□□□ 0.38
NR1I3-220ENST00000505005 KIF21AQ7Z4S6 1674 aa17.4■□□□□ 0.38
NR1I3-220ENST00000505005 MRC2Q9UBG0 1479 aa17.39■□□□□ 0.37
NR1I3-220ENST00000505005 ABCC8Q09428 1581 aa17.36■□□□□ 0.37
NR1I3-220ENST00000505005 THOC2Q8NI27 1593 aaKnown RBP17.36■□□□□ 0.37
NR1I3-220ENST00000505005 WDR62O43379 1518 aa17.31■□□□□ 0.36
NR1I3-220ENST00000505005 URB2Q14146 1524 aaKnown RBP17.16■□□□□ 0.34
NR1I3-220ENST00000505005 DNMBPQ6XZF7 1577 aa17.15■□□□□ 0.34
NR1I3-220ENST00000505005 TOPBP1Q92547 1522 aa17.13■□□□□ 0.33
NR1I3-220ENST00000505005 IFT140Q96RY7 1462 aa17.12■□□□□ 0.33
NR1I3-220ENST00000505005 WDR97A6NE52 1622 aa17■□□□□ 0.31
NR1I3-220ENST00000505005 SOGA1O94964 1423 aa16.98■□□□□ 0.31
NR1I3-220ENST00000505005 POLA1P09884 1462 aaPredicted RBP16.98■□□□□ 0.31
NR1I3-220ENST00000505005 WRNQ14191 1432 aaPredicted RBP eCLIP16.96■□□□□ 0.31
NR1I3-220ENST00000505005 CUX1P39880 1505 aa16.94■□□□□ 0.3
NR1I3-220ENST00000505005 FGD5Q6ZNL6 1462 aa16.93■□□□□ 0.3
NR1I3-220ENST00000505005 DNAJC5Q9H3Z4 198 aa16.92■□□□□ 0.3
NR1I3-220ENST00000505005 TARBP1Q13395 1621 aaKnown RBP16.91■□□□□ 0.3
NR1I3-220ENST00000505005 TOP2BQ02880 1626 aa16.9■□□□□ 0.3
NR1I3-220ENST00000505005 PHF23Q9BUL5 403 aaPredicted RBP16.89■□□□□ 0.29
NR1I3-220ENST00000505005 BIVM-ERCC5R4GMW8 1640 aa16.88■□□□□ 0.29
NR1I3-220ENST00000505005 OSCARQ8IYS5 282 aa16.86■□□□□ 0.29
NR1I3-220ENST00000505005 ABCA10Q8WWZ4 1543 aa16.84■□□□□ 0.29
NR1I3-220ENST00000505005 EIF4G3O43432 1585 aaKnown RBP16.83■□□□□ 0.28
NR1I3-220ENST00000505005 ZNF608Q9ULD9 1512 aaPredicted RBP16.83■□□□□ 0.28
NR1I3-220ENST00000505005 RAD54L2Q9Y4B4 1467 aa16.83■□□□□ 0.28
NR1I3-220ENST00000505005 AQRO60306 1485 aaKnown RBP eCLIP16.8■□□□□ 0.28
NR1I3-220ENST00000505005 GRIN2BQ13224 1484 aa16.8■□□□□ 0.28
NR1I3-220ENST00000505005 TDRD9Q8NDG6 1382 aaKnown RBP16.79■□□□□ 0.28
NR1I3-220ENST00000505005 GAPVD1Q14C86 1478 aa16.78■□□□□ 0.28
NR1I3-220ENST00000505005 MAGI1Q96QZ7 1491 aaPredicted RBP16.78■□□□□ 0.28
NR1I3-220ENST00000505005 SYNJ1O43426 1573 aa16.77■□□□□ 0.28
NR1I3-220ENST00000505005 CHMP7Q8WUX9 453 aaPredicted RBP16.73■□□□□ 0.27
NR1I3-220ENST00000505005 ABCA5Q8WWZ7 1642 aa16.7■□□□□ 0.26
NR1I3-220ENST00000505005 FBLN2P98095 1184 aa16.69■□□□□ 0.26
NR1I3-220ENST00000505005 ERICH3Q5RHP9 1530 aa16.69■□□□□ 0.26
NR1I3-220ENST00000505005 KIF27Q86VH2 1401 aa16.69■□□□□ 0.26
NR1I3-220ENST00000505005 SYNJ2O15056 1496 aa16.67■□□□□ 0.26
NR1I3-220ENST00000505005 PBRM1Q86U86 1689 aa16.67■□□□□ 0.26
NR1I3-220ENST00000505005 SNAPC4Q5SXM2 1469 aa16.67■□□□□ 0.26
NR1I3-220ENST00000505005 TRIM41Q8WV44 630 aa16.65■□□□□ 0.26
NR1I3-220ENST00000505005 FHAD1B1AJZ9 1412 aa16.62■□□□□ 0.25
NR1I3-220ENST00000505005 CHD1O14646 1710 aa16.6■□□□□ 0.25
NR1I3-220ENST00000505005 CUL7Q14999 1698 aa16.54■□□□□ 0.24
NR1I3-220ENST00000505005 ADAMTS12P58397 1594 aa16.53■□□□□ 0.24
NR1I3-220ENST00000505005 GRIN2AQ12879 1464 aa16.53■□□□□ 0.24
NR1I3-220ENST00000505005 IGF1RP08069 1367 aa16.51■□□□□ 0.23
NR1I3-220ENST00000505005 EEA1Q15075 1411 aa16.47■□□□□ 0.23
NR1I3-220ENST00000505005 CARMIL1Q5VZK9 1371 aa16.47■□□□□ 0.23
NR1I3-220ENST00000505005 NUP160Q12769 1436 aa16.46■□□□□ 0.23
NR1I3-220ENST00000505005 CLASP1Q7Z460 1538 aa16.45■□□□□ 0.22
NR1I3-220ENST00000505005 SENP3Q9H4L4 574 aaPredicted RBP16.42■□□□□ 0.22
NR1I3-220ENST00000505005 ARHGEF11O15085 1522 aa16.41■□□□□ 0.22
NR1I3-220ENST00000505005 RIMBP3CA6NJZ7 1639 aa16.38■□□□□ 0.21
NR1I3-220ENST00000505005 RIMBP3BA6NNM3 1639 aa16.38■□□□□ 0.21
NR1I3-220ENST00000505005 RIMBP3Q9UFD9 1639 aa16.38■□□□□ 0.21
NR1I3-220ENST00000505005 RAPGEF2Q9Y4G8 1499 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms