RNA–Protein interactions for RNA: ENST00000504979.1

PLXND1-207, Transcript of plexin D1, humanhuman

TSL 3

Gene PLXND1, Length 591 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLXND1-207ENST00000504979 NISCHQ9Y2I1 1504 aa46.02■■■■■ 4.96
PLXND1-207ENST00000504979 ABCC9O60706 1549 aa41.24■■■■■ 4.19
PLXND1-207ENST00000504979 CCDC180Q9P1Z9 1646 aa41.16■■■■■ 4.18
PLXND1-207ENST00000504979 RB1CC1Q8TDY2 1594 aa39.12■■■■□ 3.85
PLXND1-207ENST00000504979 NACADO15069 1562 aa38.87■■■■□ 3.81
PLXND1-207ENST00000504979 DCAF8L2P0C7V8 631 aa38.84■■■■□ 3.81
PLXND1-207ENST00000504979 DNAJC5BQ9UF47 199 aa38.68■■■■□ 3.78
PLXND1-207ENST00000504979 PABPN1Q86U42 306 aaKnown RBP eCLIP38.45■■■■□ 3.75
PLXND1-207ENST00000504979 UNC13AQ9UPW8 1703 aa38.41■■■■□ 3.74
PLXND1-207ENST00000504979 MYO15BQ96JP2 1530 aa38.29■■■■□ 3.72
PLXND1-207ENST00000504979 ZCCHC6Q5VYS8 1495 aaKnown RBP38.18■■■■□ 3.7
PLXND1-207ENST00000504979 BICRAQ9NZM4 1560 aa38.15■■■■□ 3.7
PLXND1-207ENST00000504979 DCAF1Q9Y4B6 1507 aa37.89■■■■□ 3.66
PLXND1-207ENST00000504979 SCRIBQ14160 1630 aa37.69■■■■□ 3.62
PLXND1-207ENST00000504979 SHROOM4Q9ULL8 1493 aa37.36■■■■□ 3.57
PLXND1-207ENST00000504979 CC2D2AQ9P2K1 1620 aa37.21■■■■□ 3.55
PLXND1-207ENST00000504979 EIF4G1Q04637 1599 aaKnown RBP37.14■■■■□ 3.54
PLXND1-207ENST00000504979 CECR2Q9BXF3 1484 aa37.06■■■■□ 3.52
PLXND1-207ENST00000504979 NCAPD3P42695 1498 aa35.92■■■■□ 3.34
PLXND1-207ENST00000504979 SMARCA4P51532 1647 aa35.9■■■■□ 3.34
PLXND1-207ENST00000504979 ATAD2BQ9ULI0 1458 aa35.89■■■■□ 3.34
PLXND1-207ENST00000504979 SMARCA2P51531 1590 aa35.69■■■■□ 3.3
PLXND1-207ENST00000504979 HMGXB3Q12766 1538 aa35.66■■■■□ 3.3
PLXND1-207ENST00000504979 BAZ1AQ9NRL2 1556 aaPredicted RBP35.64■■■■□ 3.3
PLXND1-207ENST00000504979 MROH2BQ7Z745 1585 aa35.55■■■■□ 3.28
PLXND1-207ENST00000504979 NESP48681 1621 aa35.52■■■■□ 3.28
PLXND1-207ENST00000504979 BAZ1BQ9UIG0 1483 aaKnown RBP35.52■■■■□ 3.28
PLXND1-207ENST00000504979 ERCC6Q03468 1493 aa35.48■■■■□ 3.27
PLXND1-207ENST00000504979 PEG3Q9GZU2 1588 aa35.47■■■■□ 3.27
PLXND1-207ENST00000504979 CUX2O14529 1486 aa35.31■■■■□ 3.24
PLXND1-207ENST00000504979 DNAJC5Q9H3Z4 198 aa35.23■■■■□ 3.23
PLXND1-207ENST00000504979 WIZO95785 1651 aa35.14■■■■□ 3.22
PLXND1-207ENST00000504979 LAMC3Q9Y6N6 1575 aa35.07■■■■□ 3.2
PLXND1-207ENST00000504979 THOC2Q8NI27 1593 aaKnown RBP35.05■■■■□ 3.2
PLXND1-207ENST00000504979 KIF21AQ7Z4S6 1674 aa35.01■■■■□ 3.19
PLXND1-207ENST00000504979 CADPSQ9ULU8 1353 aa34.84■■■■□ 3.17
PLXND1-207ENST00000504979 PDS5BQ9NTI5 1447 aa34.82■■■■□ 3.17
PLXND1-207ENST00000504979 RSF1Q96T23 1441 aaPredicted RBP34.81■■■■□ 3.16
PLXND1-207ENST00000504979 MRC2Q9UBG0 1479 aa34.61■■■■□ 3.13
PLXND1-207ENST00000504979 TOP2AP11388 1531 aaKnown RBP34.6■■■■□ 3.13
PLXND1-207ENST00000504979 WDR62O43379 1518 aa34.54■■■■□ 3.12
PLXND1-207ENST00000504979 CFTRP13569 1480 aa34.49■■■■□ 3.11
PLXND1-207ENST00000504979 FANCD2Q9BXW9 1451 aa34.49■■■■□ 3.11
PLXND1-207ENST00000504979 CEP164Q9UPV0 1460 aa34.48■■■■□ 3.11
PLXND1-207ENST00000504979 URB2Q14146 1524 aaKnown RBP34.28■■■■□ 3.08
PLXND1-207ENST00000504979 CCDC88BA6NC98 1476 aa34.27■■■■□ 3.08
PLXND1-207ENST00000504979 PRDM2Q13029 1718 aa34.13■■■■□ 3.05
PLXND1-207ENST00000504979 TOPBP1Q92547 1522 aa33.87■■■■□ 3.01
PLXND1-207ENST00000504979 ZNF608Q9ULD9 1512 aaPredicted RBP33.87■■■■□ 3.01
PLXND1-207ENST00000504979 TRIM41Q8WV44 630 aa33.85■■■■□ 3.01
PLXND1-207ENST00000504979 IFT140Q96RY7 1462 aa33.76■■■□□ 2.99
PLXND1-207ENST00000504979 DNMBPQ6XZF7 1577 aa33.72■■■□□ 2.99
PLXND1-207ENST00000504979 OSCARQ8IYS5 282 aa33.71■■■□□ 2.99
PLXND1-207ENST00000504979 EIF4G3O43432 1585 aaKnown RBP33.63■■■□□ 2.97
PLXND1-207ENST00000504979 ABCC8Q09428 1581 aa33.6■■■□□ 2.97
PLXND1-207ENST00000504979 TARBP1Q13395 1621 aaKnown RBP33.58■■■□□ 2.97
PLXND1-207ENST00000504979 POLA1P09884 1462 aaPredicted RBP33.55■■■□□ 2.96
PLXND1-207ENST00000504979 AQRO60306 1485 aaKnown RBP eCLIP33.54■■■□□ 2.962e-7■■■■■ 28.9
PLXND1-207ENST00000504979 RAD54L2Q9Y4B4 1467 aa33.5■■■□□ 2.95
PLXND1-207ENST00000504979 RIMBP3CA6NJZ7 1639 aa33.41■■■□□ 2.94
PLXND1-207ENST00000504979 RIMBP3BA6NNM3 1639 aa33.41■■■□□ 2.94
PLXND1-207ENST00000504979 RIMBP3Q9UFD9 1639 aa33.41■■■□□ 2.94
PLXND1-207ENST00000504979 SUPT5HO00267 1087 aaKnown RBP33.4■■■□□ 2.94
PLXND1-207ENST00000504979 CUX1P39880 1505 aa33.38■■■□□ 2.93
PLXND1-207ENST00000504979 CHD1O14646 1710 aa33.37■■■□□ 2.93
PLXND1-207ENST00000504979 FGD5Q6ZNL6 1462 aa33.36■■■□□ 2.93
PLXND1-207ENST00000504979 TDRD9Q8NDG6 1382 aaKnown RBP33.34■■■□□ 2.93
PLXND1-207ENST00000504979 SOGA1O94964 1423 aa33.34■■■□□ 2.93
PLXND1-207ENST00000504979 ARHGEF11O15085 1522 aa33.3■■■□□ 2.92
PLXND1-207ENST00000504979 FBLN2P98095 1184 aa33.24■■■□□ 2.91
PLXND1-207ENST00000504979 SNAPC4Q5SXM2 1469 aa33.18■■■□□ 2.9
PLXND1-207ENST00000504979 WDR97A6NE52 1622 aa33.13■■■□□ 2.89
PLXND1-207ENST00000504979 CYB5RLQ6IPT4 315 aa33.04■■■□□ 2.88
PLXND1-207ENST00000504979 ARAP1Q96P48 1450 aa33.02■■■□□ 2.88
PLXND1-207ENST00000504979 GRIN2BQ13224 1484 aa33.01■■■□□ 2.88
PLXND1-207ENST00000504979 MAGI1Q96QZ7 1491 aaPredicted RBP32.97■■■□□ 2.87
PLXND1-207ENST00000504979 PBRM1Q86U86 1689 aa32.97■■■□□ 2.87
PLXND1-207ENST00000504979 CLASP1Q7Z460 1538 aa32.96■■■□□ 2.87
PLXND1-207ENST00000504979 GAPVD1Q14C86 1478 aa32.94■■■□□ 2.86
PLXND1-207ENST00000504979 CHMP7Q8WUX9 453 aaPredicted RBP32.94■■■□□ 2.86
PLXND1-207ENST00000504979 ABCA10Q8WWZ4 1543 aa32.92■■■□□ 2.86
PLXND1-207ENST00000504979 ABCA5Q8WWZ7 1642 aa32.91■■■□□ 2.86
PLXND1-207ENST00000504979 SYNJ2O15056 1496 aa32.9■■■□□ 2.86
PLXND1-207ENST00000504979 SYNJ1O43426 1573 aa32.87■■■□□ 2.85
PLXND1-207ENST00000504979 BIVM-ERCC5R4GMW8 1640 aa32.8■■■□□ 2.84
PLXND1-207ENST00000504979 TOP2BQ02880 1626 aa32.8■■■□□ 2.84
PLXND1-207ENST00000504979 WRNQ14191 1432 aaPredicted RBP eCLIP32.78■■■□□ 2.84
PLXND1-207ENST00000504979 ADAMTS12P58397 1594 aa32.66■■■□□ 2.82
PLXND1-207ENST00000504979 GRIN2AQ12879 1464 aa32.63■■■□□ 2.81
PLXND1-207ENST00000504979 TRHP20396 242 aaPredicted RBP32.6■■■□□ 2.81
PLXND1-207ENST00000504979 ERCC6L2Q5T890 1561 aa32.6■■■□□ 2.81
PLXND1-207ENST00000504979 CEP170Q5SW79 1584 aa32.59■■■□□ 2.81
PLXND1-207ENST00000504979 NUP160Q12769 1436 aa32.51■■■□□ 2.8
PLXND1-207ENST00000504979 FHAD1B1AJZ9 1412 aa32.49■■■□□ 2.79
PLXND1-207ENST00000504979 ERICH3Q5RHP9 1530 aa32.46■■■□□ 2.79
PLXND1-207ENST00000504979 SHROOM2Q13796 1616 aa32.37■■■□□ 2.77
PLXND1-207ENST00000504979 RUSC2Q8N2Y8 1516 aa32.21■■■□□ 2.75
PLXND1-207ENST00000504979 PRG4Q92954 1404 aaPredicted RBP32.2■■■□□ 2.75
PLXND1-207ENST00000504979 IGF1RP08069 1367 aa32.15■■■□□ 2.74
PLXND1-207ENST00000504979 JPH4Q96JJ6 628 aa32.14■■■□□ 2.74
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms