RNA–Protein interactions for RNA: ENST00000504915.2

APC-203, Transcript of APC, WNT signaling pathway regulator, humanhuman

TSL 5

Gene APC, Length 817 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APC-203ENST00000504915 NISCHQ9Y2I1 1504 aa23.64■■□□□ 1.37
APC-203ENST00000504915 AEBP2Q6ZN18 517 aaPredicted RBP21.44■■□□□ 1.02
APC-203ENST00000504915 CHIC1Q5VXU3 224 aa21.27■■□□□ 1
APC-203ENST00000504915 CCDC180Q9P1Z9 1646 aa21.11■□□□□ 0.97
APC-203ENST00000504915 ABCC9O60706 1549 aa20.63■□□□□ 0.89
APC-203ENST00000504915 RB1CC1Q8TDY2 1594 aa19.9■□□□□ 0.78
APC-203ENST00000504915 NACADO15069 1562 aa19.87■□□□□ 0.77
APC-203ENST00000504915 MYO15BQ96JP2 1530 aa19.77■□□□□ 0.76
APC-203ENST00000504915 ZCCHC6Q5VYS8 1495 aaKnown RBP19.67■□□□□ 0.74
APC-203ENST00000504915 DCAF8L2P0C7V8 631 aa19.67■□□□□ 0.74
APC-203ENST00000504915 DCAF1Q9Y4B6 1507 aa19.62■□□□□ 0.73
APC-203ENST00000504915 UNC13AQ9UPW8 1703 aa19.41■□□□□ 0.7
APC-203ENST00000504915 BICRAQ9NZM4 1560 aa19.27■□□□□ 0.67
APC-203ENST00000504915 PABPN1Q86U42 306 aaKnown RBP eCLIP19.23■□□□□ 0.67
APC-203ENST00000504915 SHROOM4Q9ULL8 1493 aa19.17■□□□□ 0.66
APC-203ENST00000504915 SCRIBQ14160 1630 aa19.15■□□□□ 0.66
APC-203ENST00000504915 DNAJC5BQ9UF47 199 aa19■□□□□ 0.63
APC-203ENST00000504915 EIF4G1Q04637 1599 aaKnown RBP18.77■□□□□ 0.6
APC-203ENST00000504915 PHF23Q9BUL5 403 aaPredicted RBP18.71■□□□□ 0.59
APC-203ENST00000504915 CC2D2AQ9P2K1 1620 aa18.71■□□□□ 0.58
APC-203ENST00000504915 CECR2Q9BXF3 1484 aa18.59■□□□□ 0.57
APC-203ENST00000504915 SMARCA4P51532 1647 aa18.36■□□□□ 0.53
APC-203ENST00000504915 BAZ1AQ9NRL2 1556 aaPredicted RBP18.35■□□□□ 0.53
APC-203ENST00000504915 NCAPD3P42695 1498 aa18.33■□□□□ 0.52
APC-203ENST00000504915 SMARCA2P51531 1590 aa18.3■□□□□ 0.52
APC-203ENST00000504915 ATAD2BQ9ULI0 1458 aa18.28■□□□□ 0.52
APC-203ENST00000504915 PEG3Q9GZU2 1588 aa18.24■□□□□ 0.51
APC-203ENST00000504915 HMGXB3Q12766 1538 aa18.23■□□□□ 0.51
APC-203ENST00000504915 SENP3Q9H4L4 574 aaPredicted RBP18.19■□□□□ 0.5
APC-203ENST00000504915 MROH2BQ7Z745 1585 aa18.17■□□□□ 0.5
APC-203ENST00000504915 BAZ1BQ9UIG0 1483 aaKnown RBP18.13■□□□□ 0.49
APC-203ENST00000504915 WIZO95785 1651 aa17.97■□□□□ 0.47
APC-203ENST00000504915 RSF1Q96T23 1441 aaPredicted RBP17.95■□□□□ 0.46
APC-203ENST00000504915 LAMC3Q9Y6N6 1575 aa17.87■□□□□ 0.45
APC-203ENST00000504915 NESP48681 1621 aa17.83■□□□□ 0.44
APC-203ENST00000504915 ERCC6Q03468 1493 aa17.82■□□□□ 0.44
APC-203ENST00000504915 TOP2AP11388 1531 aaKnown RBP17.82■□□□□ 0.44
APC-203ENST00000504915 CADPSQ9ULU8 1353 aa17.76■□□□□ 0.43
APC-203ENST00000504915 CUX2O14529 1486 aa17.74■□□□□ 0.43
APC-203ENST00000504915 PDS5BQ9NTI5 1447 aa17.73■□□□□ 0.43
APC-203ENST00000504915 KIF21AQ7Z4S6 1674 aa17.65■□□□□ 0.42
APC-203ENST00000504915 CFTRP13569 1480 aa17.65■□□□□ 0.42
APC-203ENST00000504915 THOC2Q8NI27 1593 aaKnown RBP17.64■□□□□ 0.41
APC-203ENST00000504915 CCDC88BA6NC98 1476 aa17.57■□□□□ 0.4
APC-203ENST00000504915 FANCD2Q9BXW9 1451 aa17.54■□□□□ 0.4
APC-203ENST00000504915 MRC2Q9UBG0 1479 aa17.54■□□□□ 0.4
APC-203ENST00000504915 CEP164Q9UPV0 1460 aa17.54■□□□□ 0.4
APC-203ENST00000504915 PRDM2Q13029 1718 aa17.52■□□□□ 0.4
APC-203ENST00000504915 WDR62O43379 1518 aa17.5■□□□□ 0.39
APC-203ENST00000504915 PLPPR3Q6T4P5 718 aa17.41■□□□□ 0.38
APC-203ENST00000504915 URB2Q14146 1524 aaKnown RBP17.36■□□□□ 0.37
APC-203ENST00000504915 SUPT5HO00267 1087 aaKnown RBP17.32■□□□□ 0.36
APC-203ENST00000504915 ABCC8Q09428 1581 aa17.31■□□□□ 0.36
APC-203ENST00000504915 DNAJC5Q9H3Z4 198 aa17.27■□□□□ 0.36
APC-203ENST00000504915 TOPBP1Q92547 1522 aa17.25■□□□□ 0.35
APC-203ENST00000504915 DNMBPQ6XZF7 1577 aa17.24■□□□□ 0.35
APC-203ENST00000504915 IFT140Q96RY7 1462 aa17.18■□□□□ 0.34
APC-203ENST00000504915 POLA1P09884 1462 aaPredicted RBP17.1■□□□□ 0.33
APC-203ENST00000504915 TARBP1Q13395 1621 aaKnown RBP17.08■□□□□ 0.32
APC-203ENST00000504915 CUX1P39880 1505 aa17.06■□□□□ 0.32
APC-203ENST00000504915 ZNF608Q9ULD9 1512 aaPredicted RBP17.06■□□□□ 0.32
APC-203ENST00000504915 WDR97A6NE52 1622 aa17.03■□□□□ 0.32
APC-203ENST00000504915 EIF4G3O43432 1585 aaKnown RBP17.02■□□□□ 0.32
APC-203ENST00000504915 FGD5Q6ZNL6 1462 aa17.02■□□□□ 0.32
APC-203ENST00000504915 SOGA1O94964 1423 aa17.02■□□□□ 0.31
APC-203ENST00000504915 RAD54L2Q9Y4B4 1467 aa16.98■□□□□ 0.31
APC-203ENST00000504915 AQRO60306 1485 aaKnown RBP eCLIP16.95■□□□□ 0.3
APC-203ENST00000504915 OSCARQ8IYS5 282 aa16.95■□□□□ 0.3
APC-203ENST00000504915 TOP2BQ02880 1626 aa16.93■□□□□ 0.3
APC-203ENST00000504915 BIVM-ERCC5R4GMW8 1640 aa16.93■□□□□ 0.3
APC-203ENST00000504915 WRNQ14191 1432 aaPredicted RBP eCLIP16.93■□□□□ 0.3
APC-203ENST00000504915 ABCA10Q8WWZ4 1543 aa16.9■□□□□ 0.3
APC-203ENST00000504915 TDRD9Q8NDG6 1382 aaKnown RBP16.89■□□□□ 0.3
APC-203ENST00000504915 SYNJ1O43426 1573 aa16.87■□□□□ 0.29
APC-203ENST00000504915 GRIN2BQ13224 1484 aa16.86■□□□□ 0.29
APC-203ENST00000504915 MAGI1Q96QZ7 1491 aaPredicted RBP16.84■□□□□ 0.29
APC-203ENST00000504915 GAPVD1Q14C86 1478 aa16.83■□□□□ 0.28
APC-203ENST00000504915 ABCA5Q8WWZ7 1642 aa16.83■□□□□ 0.28
APC-203ENST00000504915 CHD1O14646 1710 aa16.82■□□□□ 0.28
APC-203ENST00000504915 FOXD1Q16676 465 aa16.81■□□□□ 0.28
APC-203ENST00000504915 PBRM1Q86U86 1689 aa16.81■□□□□ 0.28
APC-203ENST00000504915 SNAPC4Q5SXM2 1469 aa16.8■□□□□ 0.28
APC-203ENST00000504915 SYNJ2O15056 1496 aa16.76■□□□□ 0.27
APC-203ENST00000504915 FBLN2P98095 1184 aa16.73■□□□□ 0.27
APC-203ENST00000504915 CHMP7Q8WUX9 453 aaPredicted RBP16.72■□□□□ 0.27
APC-203ENST00000504915 ERICH3Q5RHP9 1530 aa16.7■□□□□ 0.26
APC-203ENST00000504915 RIMBP3CA6NJZ7 1639 aa16.67■□□□□ 0.26
APC-203ENST00000504915 RIMBP3BA6NNM3 1639 aa16.67■□□□□ 0.26
APC-203ENST00000504915 RIMBP3Q9UFD9 1639 aa16.67■□□□□ 0.26
APC-203ENST00000504915 ARHGEF11O15085 1522 aa16.66■□□□□ 0.26
APC-203ENST00000504915 CLASP1Q7Z460 1538 aa16.66■□□□□ 0.26
APC-203ENST00000504915 ADAMTS12P58397 1594 aa16.66■□□□□ 0.26
APC-203ENST00000504915 FHAD1B1AJZ9 1412 aa16.64■□□□□ 0.25
APC-203ENST00000504915 GRIN2AQ12879 1464 aa16.62■□□□□ 0.25
APC-203ENST00000504915 KIF27Q86VH2 1401 aa16.61■□□□□ 0.25
APC-203ENST00000504915 NUP160Q12769 1436 aa16.57■□□□□ 0.24
APC-203ENST00000504915 TRIM41Q8WV44 630 aa16.57■□□□□ 0.24
APC-203ENST00000504915 CUL7Q14999 1698 aa16.54■□□□□ 0.24
APC-203ENST00000504915 CEP170Q5SW79 1584 aa16.53■□□□□ 0.24
APC-203ENST00000504915 IGF1RP08069 1367 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms