RNA–Protein interactions for RNA: ENST00000504867.5

CDV3-205, Transcript of CDV3 homolog, humanhuman

TSL 3

Gene CDV3, Length 471 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDV3-205ENST00000504867 NISCHQ9Y2I1 1504 aa44.94■■■■■ 4.78
CDV3-205ENST00000504867 ABCC9O60706 1549 aa40.7■■■■■ 4.11
CDV3-205ENST00000504867 CCDC180Q9P1Z9 1646 aa40.42■■■■■ 4.06
CDV3-205ENST00000504867 RB1CC1Q8TDY2 1594 aa38.57■■■■□ 3.77
CDV3-205ENST00000504867 DNAJC5BQ9UF47 199 aa38.57■■■■□ 3.76
CDV3-205ENST00000504867 NACADO15069 1562 aa38.27■■■■□ 3.72
CDV3-205ENST00000504867 DCAF8L2P0C7V8 631 aa37.92■■■■□ 3.66
CDV3-205ENST00000504867 PABPN1Q86U42 306 aaKnown RBP eCLIP37.86■■■■□ 3.65
CDV3-205ENST00000504867 UNC13AQ9UPW8 1703 aa37.81■■■■□ 3.64
CDV3-205ENST00000504867 MYO15BQ96JP2 1530 aa37.69■■■■□ 3.62
CDV3-205ENST00000504867 BICRAQ9NZM4 1560 aa37.6■■■■□ 3.61
CDV3-205ENST00000504867 ZCCHC6Q5VYS8 1495 aaKnown RBP37.2■■■■□ 3.54
CDV3-205ENST00000504867 DCAF1Q9Y4B6 1507 aa37.1■■■■□ 3.53
CDV3-205ENST00000504867 SHROOM4Q9ULL8 1493 aa36.94■■■■□ 3.5
CDV3-205ENST00000504867 SCRIBQ14160 1630 aa36.8■■■■□ 3.48
CDV3-205ENST00000504867 CC2D2AQ9P2K1 1620 aa36.77■■■■□ 3.48
CDV3-205ENST00000504867 CECR2Q9BXF3 1484 aa36.69■■■■□ 3.46
CDV3-205ENST00000504867 EIF4G1Q04637 1599 aaKnown RBP36.63■■■■□ 3.45
CDV3-205ENST00000504867 DNAJC5Q9H3Z4 198 aa35.53■■■■□ 3.28
CDV3-205ENST00000504867 NCAPD3P42695 1498 aa35.38■■■■□ 3.25
CDV3-205ENST00000504867 ATAD2BQ9ULI0 1458 aa35.23■■■■□ 3.23
CDV3-205ENST00000504867 CUX2O14529 1486 aa35.17■■■■□ 3.22
CDV3-205ENST00000504867 SMARCA4P51532 1647 aa35.11■■■■□ 3.21
CDV3-205ENST00000504867 ERCC6Q03468 1493 aa35.08■■■■□ 3.21
CDV3-205ENST00000504867 HMGXB3Q12766 1538 aa35.06■■■■□ 3.2
CDV3-205ENST00000504867 SMARCA2P51531 1590 aa35.05■■■■□ 3.2
CDV3-205ENST00000504867 NESP48681 1621 aa34.94■■■■□ 3.18
CDV3-205ENST00000504867 BAZ1AQ9NRL2 1556 aaPredicted RBP34.85■■■■□ 3.17
CDV3-205ENST00000504867 BAZ1BQ9UIG0 1483 aaKnown RBP34.81■■■■□ 3.16
CDV3-205ENST00000504867 PEG3Q9GZU2 1588 aa34.81■■■■□ 3.16
CDV3-205ENST00000504867 MROH2BQ7Z745 1585 aa34.65■■■■□ 3.14
CDV3-205ENST00000504867 THOC2Q8NI27 1593 aaKnown RBP34.63■■■■□ 3.13
CDV3-205ENST00000504867 LAMC3Q9Y6N6 1575 aa34.57■■■■□ 3.13
CDV3-205ENST00000504867 KIF21AQ7Z4S6 1674 aa34.44■■■■□ 3.1
CDV3-205ENST00000504867 PDS5BQ9NTI5 1447 aa34.35■■■■□ 3.09
CDV3-205ENST00000504867 CADPSQ9ULU8 1353 aa34.26■■■■□ 3.08
CDV3-205ENST00000504867 WIZO95785 1651 aa34.21■■■■□ 3.07
CDV3-205ENST00000504867 MRC2Q9UBG0 1479 aa34.11■■■■□ 3.05
CDV3-205ENST00000504867 WDR62O43379 1518 aa34.08■■■■□ 3.05
CDV3-205ENST00000504867 CEP164Q9UPV0 1460 aa33.89■■■■□ 3.02
CDV3-205ENST00000504867 FANCD2Q9BXW9 1451 aa33.86■■■■□ 3.01
CDV3-205ENST00000504867 CFTRP13569 1480 aa33.84■■■■□ 3.01
CDV3-205ENST00000504867 RSF1Q96T23 1441 aaPredicted RBP33.82■■■■□ 3
CDV3-205ENST00000504867 TRIM41Q8WV44 630 aa33.76■■■□□ 2.99
CDV3-205ENST00000504867 TOP2AP11388 1531 aaKnown RBP33.72■■■□□ 2.99
CDV3-205ENST00000504867 URB2Q14146 1524 aaKnown RBP33.66■■■□□ 2.98
CDV3-205ENST00000504867 OSCARQ8IYS5 282 aa33.49■■■□□ 2.95
CDV3-205ENST00000504867 PRDM2Q13029 1718 aa33.44■■■□□ 2.94
CDV3-205ENST00000504867 CCDC88BA6NC98 1476 aa33.37■■■□□ 2.93
CDV3-205ENST00000504867 ZNF608Q9ULD9 1512 aaPredicted RBP33.29■■■□□ 2.92
CDV3-205ENST00000504867 IFT140Q96RY7 1462 aa33.24■■■□□ 2.91
CDV3-205ENST00000504867 TOPBP1Q92547 1522 aa33.21■■■□□ 2.91
CDV3-205ENST00000504867 RIMBP3CA6NJZ7 1639 aa33.15■■■□□ 2.9
CDV3-205ENST00000504867 RIMBP3BA6NNM3 1639 aa33.15■■■□□ 2.9
CDV3-205ENST00000504867 RIMBP3Q9UFD9 1639 aa33.15■■■□□ 2.9
CDV3-205ENST00000504867 EIF4G3O43432 1585 aaKnown RBP33.04■■■□□ 2.88
CDV3-205ENST00000504867 ABCC8Q09428 1581 aa33.04■■■□□ 2.88
CDV3-205ENST00000504867 DNMBPQ6XZF7 1577 aa33.04■■■□□ 2.88
CDV3-205ENST00000504867 ARHGEF11O15085 1522 aa33.02■■■□□ 2.88
CDV3-205ENST00000504867 TARBP1Q13395 1621 aaKnown RBP32.98■■■□□ 2.87
CDV3-205ENST00000504867 AQRO60306 1485 aaKnown RBP eCLIP32.93■■■□□ 2.865e-6■■□□□ 14.3
CDV3-205ENST00000504867 POLA1P09884 1462 aaPredicted RBP32.86■■■□□ 2.85
CDV3-205ENST00000504867 CHD1O14646 1710 aa32.86■■■□□ 2.85
CDV3-205ENST00000504867 RAD54L2Q9Y4B4 1467 aa32.76■■■□□ 2.84
CDV3-205ENST00000504867 CYB5RLQ6IPT4 315 aa32.74■■■□□ 2.83
CDV3-205ENST00000504867 ARAP1Q96P48 1450 aa32.69■■■□□ 2.82
CDV3-205ENST00000504867 TDRD9Q8NDG6 1382 aaKnown RBP32.66■■■□□ 2.82
CDV3-205ENST00000504867 SOGA1O94964 1423 aa32.66■■■□□ 2.82
CDV3-205ENST00000504867 FBLN2P98095 1184 aa32.64■■■□□ 2.82
CDV3-205ENST00000504867 FGD5Q6ZNL6 1462 aa32.6■■■□□ 2.81
CDV3-205ENST00000504867 CUX1P39880 1505 aa32.56■■■□□ 2.8
CDV3-205ENST00000504867 SNAPC4Q5SXM2 1469 aa32.55■■■□□ 2.8
CDV3-205ENST00000504867 WDR97A6NE52 1622 aa32.54■■■□□ 2.8
CDV3-205ENST00000504867 CLASP1Q7Z460 1538 aa32.51■■■□□ 2.8
CDV3-205ENST00000504867 MAGI1Q96QZ7 1491 aaPredicted RBP32.44■■■□□ 2.78
CDV3-205ENST00000504867 GRIN2BQ13224 1484 aa32.41■■■□□ 2.78
CDV3-205ENST00000504867 TRHP20396 242 aaPredicted RBP32.39■■■□□ 2.78
CDV3-205ENST00000504867 CHMP7Q8WUX9 453 aaPredicted RBP32.38■■■□□ 2.77
CDV3-205ENST00000504867 SYNJ1O43426 1573 aa32.36■■■□□ 2.77
CDV3-205ENST00000504867 SYNJ2O15056 1496 aa32.35■■■□□ 2.77
CDV3-205ENST00000504867 PBRM1Q86U86 1689 aa32.27■■■□□ 2.76
CDV3-205ENST00000504867 GAPVD1Q14C86 1478 aa32.27■■■□□ 2.76
CDV3-205ENST00000504867 SUPT5HO00267 1087 aaKnown RBP32.25■■■□□ 2.75
CDV3-205ENST00000504867 ABCA5Q8WWZ7 1642 aa32.22■■■□□ 2.75
CDV3-205ENST00000504867 ABCA10Q8WWZ4 1543 aa32.21■■■□□ 2.75
CDV3-205ENST00000504867 ERCC6L2Q5T890 1561 aa32.02■■■□□ 2.72
CDV3-205ENST00000504867 GRIN2AQ12879 1464 aa32.02■■■□□ 2.72
CDV3-205ENST00000504867 WRNQ14191 1432 aaPredicted RBP eCLIP31.98■■■□□ 2.71
CDV3-205ENST00000504867 ADAMTS12P58397 1594 aa31.98■■■□□ 2.71
CDV3-205ENST00000504867 NUP160Q12769 1436 aa31.96■■■□□ 2.71
CDV3-205ENST00000504867 CEP170Q5SW79 1584 aa31.95■■■□□ 2.71
CDV3-205ENST00000504867 BIVM-ERCC5R4GMW8 1640 aa31.94■■■□□ 2.7
CDV3-205ENST00000504867 TOP2BQ02880 1626 aa31.93■■■□□ 2.7
CDV3-205ENST00000504867 SHROOM2Q13796 1616 aa31.86■■■□□ 2.69
CDV3-205ENST00000504867 FHAD1B1AJZ9 1412 aa31.83■■■□□ 2.69
CDV3-205ENST00000504867 ERICH3Q5RHP9 1530 aa31.79■■■□□ 2.68
CDV3-205ENST00000504867 PRG4Q92954 1404 aaPredicted RBP31.62■■■□□ 2.65
CDV3-205ENST00000504867 AEBP2Q6ZN18 517 aaPredicted RBP31.6■■■□□ 2.65
CDV3-205ENST00000504867 KIF13AQ9H1H9 1805 aa31.59■■■□□ 2.65
CDV3-205ENST00000504867 JPH4Q96JJ6 628 aa31.58■■■□□ 2.65
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms