RNA–Protein interactions for RNA: ENST00000504858.5

NECAP2-209, Transcript of NECAP endocytosis associated 2, humanhuman

TSL 5

Gene NECAP2, Length 727 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP2-209ENST00000504858 NISCHQ9Y2I1 1504 aa41.19■■■■■ 4.18
NECAP2-209ENST00000504858 CCDC180Q9P1Z9 1646 aa36.77■■■■□ 3.48
NECAP2-209ENST00000504858 ABCC9O60706 1549 aa35.94■■■■□ 3.34
NECAP2-209ENST00000504858 RB1CC1Q8TDY2 1594 aa34.64■■■■□ 3.14
NECAP2-209ENST00000504858 NACADO15069 1562 aa34.6■■■■□ 3.13
NECAP2-209ENST00000504858 MYO15BQ96JP2 1530 aa34.44■■■■□ 3.1
NECAP2-209ENST00000504858 ZCCHC6Q5VYS8 1495 aaKnown RBP34.3■■■■□ 3.08
NECAP2-209ENST00000504858 DCAF8L2P0C7V8 631 aa34.21■■■■□ 3.07
NECAP2-209ENST00000504858 DCAF1Q9Y4B6 1507 aa34.2■■■■□ 3.06
NECAP2-209ENST00000504858 UNC13AQ9UPW8 1703 aa33.84■■■■□ 3.01
NECAP2-209ENST00000504858 BICRAQ9NZM4 1560 aa33.6■■■□□ 2.97
NECAP2-209ENST00000504858 PABPN1Q86U42 306 aaKnown RBP eCLIP33.49■■■□□ 2.95
NECAP2-209ENST00000504858 SHROOM4Q9ULL8 1493 aa33.37■■■□□ 2.93
NECAP2-209ENST00000504858 SCRIBQ14160 1630 aa33.36■■■□□ 2.93
NECAP2-209ENST00000504858 DNAJC5BQ9UF47 199 aa33.15■■■□□ 2.9
NECAP2-209ENST00000504858 EIF4G1Q04637 1599 aaKnown RBP32.7■■■□□ 2.83
NECAP2-209ENST00000504858 CC2D2AQ9P2K1 1620 aa32.59■■■□□ 2.81
NECAP2-209ENST00000504858 CECR2Q9BXF3 1484 aa32.37■■■□□ 2.77
NECAP2-209ENST00000504858 SMARCA4P51532 1647 aa31.99■■■□□ 2.71
NECAP2-209ENST00000504858 BAZ1AQ9NRL2 1556 aaPredicted RBP31.95■■■□□ 2.71
NECAP2-209ENST00000504858 NCAPD3P42695 1498 aa31.92■■■□□ 2.7
NECAP2-209ENST00000504858 ATAD2BQ9ULI0 1458 aa31.86■■■□□ 2.69
NECAP2-209ENST00000504858 SMARCA2P51531 1590 aa31.85■■■□□ 2.69
NECAP2-209ENST00000504858 PEG3Q9GZU2 1588 aa31.78■■■□□ 2.68
NECAP2-209ENST00000504858 HMGXB3Q12766 1538 aa31.76■■■□□ 2.68
NECAP2-209ENST00000504858 MROH2BQ7Z745 1585 aa31.68■■■□□ 2.66
NECAP2-209ENST00000504858 BAZ1BQ9UIG0 1483 aaKnown RBP31.56■■■□□ 2.64
NECAP2-209ENST00000504858 WIZO95785 1651 aa31.32■■■□□ 2.6
NECAP2-209ENST00000504858 RSF1Q96T23 1441 aaPredicted RBP31.28■■■□□ 2.6
NECAP2-209ENST00000504858 LAMC3Q9Y6N6 1575 aa31.1■■■□□ 2.57
NECAP2-209ENST00000504858 NESP48681 1621 aa31.07■■■□□ 2.56
NECAP2-209ENST00000504858 TOP2AP11388 1531 aaKnown RBP31.04■■■□□ 2.56
NECAP2-209ENST00000504858 ERCC6Q03468 1493 aa31.01■■■□□ 2.55
NECAP2-209ENST00000504858 CADPSQ9ULU8 1353 aa30.92■■■□□ 2.54
NECAP2-209ENST00000504858 CUX2O14529 1486 aa30.88■■■□□ 2.53
NECAP2-209ENST00000504858 PDS5BQ9NTI5 1447 aa30.85■■■□□ 2.53
NECAP2-209ENST00000504858 CFTRP13569 1480 aa30.75■■■□□ 2.51
NECAP2-209ENST00000504858 KIF21AQ7Z4S6 1674 aa30.74■■■□□ 2.51
NECAP2-209ENST00000504858 THOC2Q8NI27 1593 aaKnown RBP30.74■■■□□ 2.51
NECAP2-209ENST00000504858 CCDC88BA6NC98 1476 aa30.63■■■□□ 2.49
NECAP2-209ENST00000504858 FANCD2Q9BXW9 1451 aa30.55■■■□□ 2.48
NECAP2-209ENST00000504858 MRC2Q9UBG0 1479 aa30.54■■■□□ 2.48
NECAP2-209ENST00000504858 CEP164Q9UPV0 1460 aa30.53■■■□□ 2.48
NECAP2-209ENST00000504858 PRDM2Q13029 1718 aa30.52■■■□□ 2.48
NECAP2-209ENST00000504858 WDR62O43379 1518 aa30.48■■■□□ 2.47
NECAP2-209ENST00000504858 URB2Q14146 1524 aaKnown RBP30.26■■■□□ 2.43
NECAP2-209ENST00000504858 SUPT5HO00267 1087 aaKnown RBP30.15■■■□□ 2.42
NECAP2-209ENST00000504858 ABCC8Q09428 1581 aa30.11■■■□□ 2.41
NECAP2-209ENST00000504858 DNAJC5Q9H3Z4 198 aa30.07■■■□□ 2.4
NECAP2-209ENST00000504858 TOPBP1Q92547 1522 aa30.06■■■□□ 2.4
NECAP2-209ENST00000504858 DNMBPQ6XZF7 1577 aa30.03■■■□□ 2.4
NECAP2-209ENST00000504858 IFT140Q96RY7 1462 aa29.93■■■□□ 2.38
NECAP2-209ENST00000504858 POLA1P09884 1462 aaPredicted RBP29.79■■■□□ 2.36
NECAP2-209ENST00000504858 TARBP1Q13395 1621 aaKnown RBP29.78■■■□□ 2.36
NECAP2-209ENST00000504858 CUX1P39880 1505 aa29.75■■■□□ 2.35
NECAP2-209ENST00000504858 ZNF608Q9ULD9 1512 aaPredicted RBP29.73■■■□□ 2.35
NECAP2-209ENST00000504858 FGD5Q6ZNL6 1462 aa29.66■■■□□ 2.34
NECAP2-209ENST00000504858 EIF4G3O43432 1585 aaKnown RBP29.65■■■□□ 2.34
NECAP2-209ENST00000504858 SOGA1O94964 1423 aa29.62■■■□□ 2.33
NECAP2-209ENST00000504858 WDR97A6NE52 1622 aa29.62■■■□□ 2.33
NECAP2-209ENST00000504858 RAD54L2Q9Y4B4 1467 aa29.59■■■□□ 2.33
NECAP2-209ENST00000504858 AQRO60306 1485 aaKnown RBP eCLIP29.53■■■□□ 2.325e-7■■■□□ 18.6
NECAP2-209ENST00000504858 BIVM-ERCC5R4GMW8 1640 aa29.5■■■□□ 2.31
NECAP2-209ENST00000504858 TOP2BQ02880 1626 aa29.49■■■□□ 2.31
NECAP2-209ENST00000504858 WRNQ14191 1432 aaPredicted RBP eCLIP29.49■■■□□ 2.312e-6■■■■□ 22.3
NECAP2-209ENST00000504858 OSCARQ8IYS5 282 aa29.48■■■□□ 2.31
NECAP2-209ENST00000504858 ABCA10Q8WWZ4 1543 aa29.44■■■□□ 2.3
NECAP2-209ENST00000504858 TDRD9Q8NDG6 1382 aaKnown RBP29.43■■■□□ 2.3
NECAP2-209ENST00000504858 SYNJ1O43426 1573 aa29.41■■■□□ 2.3
NECAP2-209ENST00000504858 GRIN2BQ13224 1484 aa29.34■■■□□ 2.29
NECAP2-209ENST00000504858 ABCA5Q8WWZ7 1642 aa29.33■■■□□ 2.29
NECAP2-209ENST00000504858 MAGI1Q96QZ7 1491 aaPredicted RBP29.32■■■□□ 2.28
NECAP2-209ENST00000504858 GAPVD1Q14C86 1478 aa29.3■■■□□ 2.28
NECAP2-209ENST00000504858 CHD1O14646 1710 aa29.29■■■□□ 2.28
NECAP2-209ENST00000504858 SNAPC4Q5SXM2 1469 aa29.28■■■□□ 2.28
NECAP2-209ENST00000504858 PBRM1Q86U86 1689 aa29.26■■■□□ 2.27
NECAP2-209ENST00000504858 SYNJ2O15056 1496 aa29.18■■■□□ 2.26
NECAP2-209ENST00000504858 FBLN2P98095 1184 aa29.1■■■□□ 2.25
NECAP2-209ENST00000504858 ERICH3Q5RHP9 1530 aa29.1■■■□□ 2.25
NECAP2-209ENST00000504858 CHMP7Q8WUX9 453 aaPredicted RBP29.09■■■□□ 2.25
NECAP2-209ENST00000504858 CLASP1Q7Z460 1538 aa29.04■■■□□ 2.24
NECAP2-209ENST00000504858 ADAMTS12P58397 1594 aa29.04■■■□□ 2.24
NECAP2-209ENST00000504858 RIMBP3CA6NJZ7 1639 aa29.03■■■□□ 2.24
NECAP2-209ENST00000504858 RIMBP3BA6NNM3 1639 aa29.03■■■□□ 2.24
NECAP2-209ENST00000504858 RIMBP3Q9UFD9 1639 aa29.03■■■□□ 2.24
NECAP2-209ENST00000504858 ARHGEF11O15085 1522 aa29.03■■■□□ 2.24
NECAP2-209ENST00000504858 FHAD1B1AJZ9 1412 aa28.98■■■□□ 2.23
NECAP2-209ENST00000504858 GRIN2AQ12879 1464 aa28.97■■■□□ 2.23
NECAP2-209ENST00000504858 KIF27Q86VH2 1401 aa28.9■■■□□ 2.22
NECAP2-209ENST00000504858 NUP160Q12769 1436 aa28.88■■■□□ 2.21
NECAP2-209ENST00000504858 TRIM41Q8WV44 630 aa28.82■■■□□ 2.2
NECAP2-209ENST00000504858 CEP170Q5SW79 1584 aa28.8■■■□□ 2.2
NECAP2-209ENST00000504858 IGF1RP08069 1367 aa28.8■■■□□ 2.2
NECAP2-209ENST00000504858 CUL7Q14999 1698 aa28.78■■■□□ 2.2
NECAP2-209ENST00000504858 ARAP1Q96P48 1450 aa28.78■■■□□ 2.2
NECAP2-209ENST00000504858 SHROOM2Q13796 1616 aa28.71■■■□□ 2.19
NECAP2-209ENST00000504858 CYB5RLQ6IPT4 315 aa28.65■■■□□ 2.18
NECAP2-209ENST00000504858 RUSC2Q8N2Y8 1516 aa28.61■■■□□ 2.17
NECAP2-209ENST00000504858 CARMIL1Q5VZK9 1371 aa28.61■■■□□ 2.17
NECAP2-209ENST00000504858 KIAA0586Q9BVV6 1533 aa28.54■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 141.3 ms