RNA–Protein interactions for RNA: ENST00000504776.5

RGMB-203, Transcript of repulsive guidance molecule BMP co-receptor b, humanhuman

TSL 3

Gene RGMB, Length 880 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGMB-203ENST00000504776 NISCHQ9Y2I1 1504 aa46.6■■■■■ 5.05
RGMB-203ENST00000504776 CCDC180Q9P1Z9 1646 aa41.6■■■■■ 4.25
RGMB-203ENST00000504776 ABCC9O60706 1549 aa40.75■■■■■ 4.11
RGMB-203ENST00000504776 RB1CC1Q8TDY2 1594 aa39.19■■■■□ 3.86
RGMB-203ENST00000504776 NACADO15069 1562 aa39.1■■■■□ 3.85
RGMB-203ENST00000504776 DCAF8L2P0C7V8 631 aa38.86■■■■□ 3.81
RGMB-203ENST00000504776 MYO15BQ96JP2 1530 aa38.83■■■■□ 3.81
RGMB-203ENST00000504776 ZCCHC6Q5VYS8 1495 aaKnown RBP38.8■■■■□ 3.8
RGMB-203ENST00000504776 DCAF1Q9Y4B6 1507 aa38.59■■■■□ 3.77
RGMB-203ENST00000504776 UNC13AQ9UPW8 1703 aa38.38■■■■□ 3.73
RGMB-203ENST00000504776 BICRAQ9NZM4 1560 aa38.02■■■■□ 3.68
RGMB-203ENST00000504776 PABPN1Q86U42 306 aaKnown RBP eCLIP37.98■■■■□ 3.67
RGMB-203ENST00000504776 SCRIBQ14160 1630 aa37.87■■■■□ 3.65
RGMB-203ENST00000504776 SHROOM4Q9ULL8 1493 aa37.64■■■■□ 3.62
RGMB-203ENST00000504776 DNAJC5BQ9UF47 199 aa37.51■■■■□ 3.6
RGMB-203ENST00000504776 EIF4G1Q04637 1599 aaKnown RBP37.02■■■■□ 3.52
RGMB-203ENST00000504776 CC2D2AQ9P2K1 1620 aa36.91■■■■□ 3.5
RGMB-203ENST00000504776 CECR2Q9BXF3 1484 aa36.65■■■■□ 3.46
RGMB-203ENST00000504776 SMARCA4P51532 1647 aa36.23■■■■□ 3.39
RGMB-203ENST00000504776 BAZ1AQ9NRL2 1556 aaPredicted RBP36.15■■■■□ 3.38
RGMB-203ENST00000504776 NCAPD3P42695 1498 aa36.05■■■■□ 3.36
RGMB-203ENST00000504776 ATAD2BQ9ULI0 1458 aa36.04■■■■□ 3.36
RGMB-203ENST00000504776 SMARCA2P51531 1590 aa36.02■■■■□ 3.36
RGMB-203ENST00000504776 HMGXB3Q12766 1538 aa35.91■■■■□ 3.34
RGMB-203ENST00000504776 PEG3Q9GZU2 1588 aa35.9■■■■□ 3.34
RGMB-203ENST00000504776 MROH2BQ7Z745 1585 aa35.89■■■■□ 3.34
RGMB-203ENST00000504776 BAZ1BQ9UIG0 1483 aaKnown RBP35.73■■■■□ 3.31
RGMB-203ENST00000504776 WIZO95785 1651 aa35.53■■■■□ 3.28
RGMB-203ENST00000504776 RSF1Q96T23 1441 aaPredicted RBP35.4■■■■□ 3.26
RGMB-203ENST00000504776 NESP48681 1621 aa35.22■■■■□ 3.23
RGMB-203ENST00000504776 LAMC3Q9Y6N6 1575 aa35.17■■■■□ 3.22
RGMB-203ENST00000504776 ERCC6Q03468 1493 aa35.16■■■■□ 3.22
RGMB-203ENST00000504776 TOP2AP11388 1531 aaKnown RBP35.15■■■■□ 3.22
RGMB-203ENST00000504776 CADPSQ9ULU8 1353 aa34.96■■■■□ 3.19
RGMB-203ENST00000504776 CUX2O14529 1486 aa34.89■■■■□ 3.18
RGMB-203ENST00000504776 PDS5BQ9NTI5 1447 aa34.89■■■■□ 3.18
RGMB-203ENST00000504776 KIF21AQ7Z4S6 1674 aa34.89■■■■□ 3.18
RGMB-203ENST00000504776 THOC2Q8NI27 1593 aaKnown RBP34.81■■■■□ 3.16
RGMB-203ENST00000504776 CFTRP13569 1480 aa34.75■■■■□ 3.15
RGMB-203ENST00000504776 CCDC88BA6NC98 1476 aa34.69■■■■□ 3.14
RGMB-203ENST00000504776 PRDM2Q13029 1718 aa34.6■■■■□ 3.13
RGMB-203ENST00000504776 FANCD2Q9BXW9 1451 aa34.58■■■■□ 3.13
RGMB-203ENST00000504776 CEP164Q9UPV0 1460 aa34.57■■■■□ 3.12
RGMB-203ENST00000504776 MRC2Q9UBG0 1479 aa34.56■■■■□ 3.12
RGMB-203ENST00000504776 DNAJC5Q9H3Z4 198 aa34.52■■■■□ 3.12
RGMB-203ENST00000504776 WDR62O43379 1518 aa34.49■■■■□ 3.11
RGMB-203ENST00000504776 SUPT5HO00267 1087 aaKnown RBP34.28■■■■□ 3.08
RGMB-203ENST00000504776 URB2Q14146 1524 aaKnown RBP34.25■■■■□ 3.07
RGMB-203ENST00000504776 TOPBP1Q92547 1522 aa34.02■■■■□ 3.04
RGMB-203ENST00000504776 ABCC8Q09428 1581 aa34.01■■■■□ 3.03
RGMB-203ENST00000504776 DNMBPQ6XZF7 1577 aa33.99■■■■□ 3.03
RGMB-203ENST00000504776 IFT140Q96RY7 1462 aa33.85■■■■□ 3.01
RGMB-203ENST00000504776 POLA1P09884 1462 aaPredicted RBP33.72■■■□□ 2.99
RGMB-203ENST00000504776 CUX1P39880 1505 aa33.7■■■□□ 2.99
RGMB-203ENST00000504776 TARBP1Q13395 1621 aaKnown RBP33.7■■■□□ 2.99
RGMB-203ENST00000504776 ZNF608Q9ULD9 1512 aaPredicted RBP33.69■■■□□ 2.98
RGMB-203ENST00000504776 EIF4G3O43432 1585 aaKnown RBP33.62■■■□□ 2.97
RGMB-203ENST00000504776 FGD5Q6ZNL6 1462 aa33.61■■■□□ 2.97
RGMB-203ENST00000504776 RAD54L2Q9Y4B4 1467 aa33.54■■■□□ 2.96
RGMB-203ENST00000504776 SOGA1O94964 1423 aa33.53■■■□□ 2.96
RGMB-203ENST00000504776 WDR97A6NE52 1622 aa33.46■■■□□ 2.95
RGMB-203ENST00000504776 AQRO60306 1485 aaKnown RBP eCLIP33.45■■■□□ 2.95
RGMB-203ENST00000504776 BIVM-ERCC5R4GMW8 1640 aa33.42■■■□□ 2.94
RGMB-203ENST00000504776 WRNQ14191 1432 aaPredicted RBP eCLIP33.4■■■□□ 2.94
RGMB-203ENST00000504776 TOP2BQ02880 1626 aa33.39■■■□□ 2.94
RGMB-203ENST00000504776 SYNJ1O43426 1573 aa33.36■■■□□ 2.93
RGMB-203ENST00000504776 TDRD9Q8NDG6 1382 aaKnown RBP33.35■■■□□ 2.93
RGMB-203ENST00000504776 OSCARQ8IYS5 282 aa33.32■■■□□ 2.92
RGMB-203ENST00000504776 ABCA10Q8WWZ4 1543 aa33.28■■■□□ 2.92
RGMB-203ENST00000504776 CHD1O14646 1710 aa33.25■■■□□ 2.91
RGMB-203ENST00000504776 ABCA5Q8WWZ7 1642 aa33.21■■■□□ 2.91
RGMB-203ENST00000504776 PBRM1Q86U86 1689 aa33.2■■■□□ 2.91
RGMB-203ENST00000504776 GRIN2BQ13224 1484 aa33.2■■■□□ 2.91
RGMB-203ENST00000504776 SNAPC4Q5SXM2 1469 aa33.18■■■□□ 2.9
RGMB-203ENST00000504776 GAPVD1Q14C86 1478 aa33.18■■■□□ 2.9
RGMB-203ENST00000504776 MAGI1Q96QZ7 1491 aaPredicted RBP33.16■■■□□ 2.9
RGMB-203ENST00000504776 FBLN2P98095 1184 aa33.03■■■□□ 2.88
RGMB-203ENST00000504776 SYNJ2O15056 1496 aa33.02■■■□□ 2.88
RGMB-203ENST00000504776 CHMP7Q8WUX9 453 aaPredicted RBP32.94■■■□□ 2.86
RGMB-203ENST00000504776 RIMBP3CA6NJZ7 1639 aa32.91■■■□□ 2.86
RGMB-203ENST00000504776 RIMBP3BA6NNM3 1639 aa32.91■■■□□ 2.86
RGMB-203ENST00000504776 RIMBP3Q9UFD9 1639 aa32.91■■■□□ 2.86
RGMB-203ENST00000504776 ERICH3Q5RHP9 1530 aa32.9■■■□□ 2.86
RGMB-203ENST00000504776 ADAMTS12P58397 1594 aa32.9■■■□□ 2.86
RGMB-203ENST00000504776 ARHGEF11O15085 1522 aa32.87■■■□□ 2.85
RGMB-203ENST00000504776 CLASP1Q7Z460 1538 aa32.86■■■□□ 2.85
RGMB-203ENST00000504776 TRIM41Q8WV44 630 aa32.85■■■□□ 2.85
RGMB-203ENST00000504776 GRIN2AQ12879 1464 aa32.79■■■□□ 2.84
RGMB-203ENST00000504776 FHAD1B1AJZ9 1412 aa32.78■■■□□ 2.84
RGMB-203ENST00000504776 KIF27Q86VH2 1401 aa32.7■■■□□ 2.83
RGMB-203ENST00000504776 NUP160Q12769 1436 aa32.65■■■□□ 2.82
RGMB-203ENST00000504776 CEP170Q5SW79 1584 aa32.65■■■□□ 2.82
RGMB-203ENST00000504776 CUL7Q14999 1698 aa32.6■■■□□ 2.81
RGMB-203ENST00000504776 ARAP1Q96P48 1450 aa32.58■■■□□ 2.81
RGMB-203ENST00000504776 IGF1RP08069 1367 aa32.57■■■□□ 2.8
RGMB-203ENST00000504776 SHROOM2Q13796 1616 aa32.48■■■□□ 2.79
RGMB-203ENST00000504776 CYB5RLQ6IPT4 315 aa32.46■■■□□ 2.79
RGMB-203ENST00000504776 RUSC2Q8N2Y8 1516 aa32.42■■■□□ 2.78
RGMB-203ENST00000504776 CARMIL1Q5VZK9 1371 aa32.37■■■□□ 2.77
RGMB-203ENST00000504776 ERCC6L2Q5T890 1561 aa32.36■■■□□ 2.77
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms