RNA–Protein interactions for RNA: ENST00000504754.1

SGMS2-206, Transcript of sphingomyelin synthase 2, humanhuman

TSL 3

Gene SGMS2, Length 459 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS2-206ENST00000504754 AEBP2Q6ZN18 517 aaPredicted RBP24.06■■□□□ 1.44
SGMS2-206ENST00000504754 NISCHQ9Y2I1 1504 aa23.74■■□□□ 1.39
SGMS2-206ENST00000504754 CHIC1Q5VXU3 224 aa22.73■■□□□ 1.23
SGMS2-206ENST00000504754 CCDC180Q9P1Z9 1646 aa21.17■□□□□ 0.98
SGMS2-206ENST00000504754 ABCC9O60706 1549 aa20.77■□□□□ 0.92
SGMS2-206ENST00000504754 SENP3Q9H4L4 574 aaPredicted RBP20.48■□□□□ 0.87
SGMS2-206ENST00000504754 PHF23Q9BUL5 403 aaPredicted RBP20.22■□□□□ 0.83
SGMS2-206ENST00000504754 RB1CC1Q8TDY2 1594 aa19.91■□□□□ 0.78
SGMS2-206ENST00000504754 NACADO15069 1562 aa19.87■□□□□ 0.77
SGMS2-206ENST00000504754 ZCCHC6Q5VYS8 1495 aaKnown RBP19.78■□□□□ 0.76
SGMS2-206ENST00000504754 MYO15BQ96JP2 1530 aa19.72■□□□□ 0.75
SGMS2-206ENST00000504754 DCAF8L2P0C7V8 631 aa19.72■□□□□ 0.75
SGMS2-206ENST00000504754 UNC13AQ9UPW8 1703 aa19.64■□□□□ 0.73
SGMS2-206ENST00000504754 DCAF1Q9Y4B6 1507 aa19.62■□□□□ 0.73
SGMS2-206ENST00000504754 BICRAQ9NZM4 1560 aa19.43■□□□□ 0.7
SGMS2-206ENST00000504754 PABPN1Q86U42 306 aaKnown RBP eCLIP19.36■□□□□ 0.69
SGMS2-206ENST00000504754 SCRIBQ14160 1630 aa19.31■□□□□ 0.68
SGMS2-206ENST00000504754 DNAJC5BQ9UF47 199 aa19.2■□□□□ 0.66
SGMS2-206ENST00000504754 FOXD1Q16676 465 aa19.13■□□□□ 0.65
SGMS2-206ENST00000504754 SHROOM4Q9ULL8 1493 aa19.07■□□□□ 0.64
SGMS2-206ENST00000504754 EIF4G1Q04637 1599 aaKnown RBP18.85■□□□□ 0.61
SGMS2-206ENST00000504754 CC2D2AQ9P2K1 1620 aa18.82■□□□□ 0.6
SGMS2-206ENST00000504754 CECR2Q9BXF3 1484 aa18.65■□□□□ 0.58
SGMS2-206ENST00000504754 SMARCA4P51532 1647 aa18.46■□□□□ 0.55
SGMS2-206ENST00000504754 BAZ1AQ9NRL2 1556 aaPredicted RBP18.37■□□□□ 0.53
SGMS2-206ENST00000504754 ATAD2BQ9ULI0 1458 aa18.36■□□□□ 0.53
SGMS2-206ENST00000504754 NCAPD3P42695 1498 aa18.33■□□□□ 0.53
SGMS2-206ENST00000504754 MROH2BQ7Z745 1585 aa18.33■□□□□ 0.52
SGMS2-206ENST00000504754 SMARCA2P51531 1590 aa18.29■□□□□ 0.52
SGMS2-206ENST00000504754 PEG3Q9GZU2 1588 aa18.29■□□□□ 0.52
SGMS2-206ENST00000504754 HMGXB3Q12766 1538 aa18.26■□□□□ 0.51
SGMS2-206ENST00000504754 BAZ1BQ9UIG0 1483 aaKnown RBP18.16■□□□□ 0.5
SGMS2-206ENST00000504754 WIZO95785 1651 aa18.15■□□□□ 0.5
SGMS2-206ENST00000504754 PLPPR3Q6T4P5 718 aa18.1■□□□□ 0.49
SGMS2-206ENST00000504754 RSF1Q96T23 1441 aaPredicted RBP18.05■□□□□ 0.48
SGMS2-206ENST00000504754 NESP48681 1621 aa17.99■□□□□ 0.47
SGMS2-206ENST00000504754 TOP2AP11388 1531 aaKnown RBP17.9■□□□□ 0.46
SGMS2-206ENST00000504754 MSH5O43196 834 aa17.9■□□□□ 0.46
SGMS2-206ENST00000504754 LAMC3Q9Y6N6 1575 aa17.87■□□□□ 0.45
SGMS2-206ENST00000504754 PPP6R1Q9UPN7 881 aa17.85■□□□□ 0.45
SGMS2-206ENST00000504754 ERCC6Q03468 1493 aa17.83■□□□□ 0.45
SGMS2-206ENST00000504754 KIF21AQ7Z4S6 1674 aa17.81■□□□□ 0.44
SGMS2-206ENST00000504754 PIAS4Q8N2W9 510 aaPredicted RBP17.81■□□□□ 0.44
SGMS2-206ENST00000504754 THOC2Q8NI27 1593 aaKnown RBP17.77■□□□□ 0.44
SGMS2-206ENST00000504754 CADPSQ9ULU8 1353 aa17.77■□□□□ 0.43
SGMS2-206ENST00000504754 ADRA2BP18089 450 aa17.74■□□□□ 0.43
SGMS2-206ENST00000504754 CUX2O14529 1486 aa17.71■□□□□ 0.43
SGMS2-206ENST00000504754 CCDC88BA6NC98 1476 aa17.69■□□□□ 0.42
SGMS2-206ENST00000504754 CFTRP13569 1480 aa17.69■□□□□ 0.42
SGMS2-206ENST00000504754 PDS5BQ9NTI5 1447 aa17.68■□□□□ 0.42
SGMS2-206ENST00000504754 PRDM2Q13029 1718 aa17.64■□□□□ 0.41
SGMS2-206ENST00000504754 POTEDQ86YR6 584 aa17.64■□□□□ 0.41
SGMS2-206ENST00000504754 FANCD2Q9BXW9 1451 aa17.59■□□□□ 0.41
SGMS2-206ENST00000504754 MRC2Q9UBG0 1479 aa17.56■□□□□ 0.4
SGMS2-206ENST00000504754 WDR62O43379 1518 aa17.56■□□□□ 0.4
SGMS2-206ENST00000504754 CEP164Q9UPV0 1460 aa17.56■□□□□ 0.4
SGMS2-206ENST00000504754 URB2Q14146 1524 aaKnown RBP17.47■□□□□ 0.39
SGMS2-206ENST00000504754 SUPT5HO00267 1087 aaKnown RBP17.43■□□□□ 0.38
SGMS2-206ENST00000504754 TOPBP1Q92547 1522 aa17.33■□□□□ 0.37
SGMS2-206ENST00000504754 DNMBPQ6XZF7 1577 aa17.3■□□□□ 0.36
SGMS2-206ENST00000504754 DNAJC5Q9H3Z4 198 aa17.26■□□□□ 0.35
SGMS2-206ENST00000504754 ABCC8Q09428 1581 aa17.22■□□□□ 0.35
SGMS2-206ENST00000504754 TARBP1Q13395 1621 aaKnown RBP17.2■□□□□ 0.34
SGMS2-206ENST00000504754 CUX1P39880 1505 aa17.2■□□□□ 0.34
SGMS2-206ENST00000504754 ZNF608Q9ULD9 1512 aaPredicted RBP17.2■□□□□ 0.34
SGMS2-206ENST00000504754 IFT140Q96RY7 1462 aa17.19■□□□□ 0.34
SGMS2-206ENST00000504754 POLA1P09884 1462 aaPredicted RBP17.18■□□□□ 0.34
SGMS2-206ENST00000504754 EIF4G3O43432 1585 aaKnown RBP17.13■□□□□ 0.33
SGMS2-206ENST00000504754 FGD5Q6ZNL6 1462 aa17.12■□□□□ 0.33
SGMS2-206ENST00000504754 RAD54L2Q9Y4B4 1467 aa17.12■□□□□ 0.33
SGMS2-206ENST00000504754 WDR97A6NE52 1622 aa17.07■□□□□ 0.32
SGMS2-206ENST00000504754 AQRO60306 1485 aaKnown RBP eCLIP17.05■□□□□ 0.32
SGMS2-206ENST00000504754 SOGA1O94964 1423 aa17.04■□□□□ 0.32
SGMS2-206ENST00000504754 BIVM-ERCC5R4GMW8 1640 aa17.03■□□□□ 0.32
SGMS2-206ENST00000504754 SYNJ1O43426 1573 aa17.03■□□□□ 0.32
SGMS2-206ENST00000504754 TOP2BQ02880 1626 aa17■□□□□ 0.31
SGMS2-206ENST00000504754 TDRD9Q8NDG6 1382 aaKnown RBP16.99■□□□□ 0.31
SGMS2-206ENST00000504754 WRNQ14191 1432 aaPredicted RBP eCLIP16.97■□□□□ 0.31
SGMS2-206ENST00000504754 CHD1O14646 1710 aa16.97■□□□□ 0.31
SGMS2-206ENST00000504754 ABCA5Q8WWZ7 1642 aa16.94■□□□□ 0.3
SGMS2-206ENST00000504754 ABCA10Q8WWZ4 1543 aa16.94■□□□□ 0.3
SGMS2-206ENST00000504754 PBRM1Q86U86 1689 aa16.93■□□□□ 0.3
SGMS2-206ENST00000504754 SNAPC4Q5SXM2 1469 aa16.89■□□□□ 0.29
SGMS2-206ENST00000504754 OSCARQ8IYS5 282 aa16.88■□□□□ 0.29
SGMS2-206ENST00000504754 GRIN2BQ13224 1484 aa16.86■□□□□ 0.29
SGMS2-206ENST00000504754 GAPVD1Q14C86 1478 aa16.86■□□□□ 0.29
SGMS2-206ENST00000504754 MAGI1Q96QZ7 1491 aaPredicted RBP16.83■□□□□ 0.28
SGMS2-206ENST00000504754 SYNJ2O15056 1496 aa16.78■□□□□ 0.28
SGMS2-206ENST00000504754 RIMBP3CA6NJZ7 1639 aa16.78■□□□□ 0.28
SGMS2-206ENST00000504754 RIMBP3BA6NNM3 1639 aa16.78■□□□□ 0.28
SGMS2-206ENST00000504754 RIMBP3Q9UFD9 1639 aa16.78■□□□□ 0.28
SGMS2-206ENST00000504754 ADAMTS12P58397 1594 aa16.77■□□□□ 0.27
SGMS2-206ENST00000504754 CLASP1Q7Z460 1538 aa16.75■□□□□ 0.27
SGMS2-206ENST00000504754 FBLN2P98095 1184 aa16.75■□□□□ 0.27
SGMS2-206ENST00000504754 ARHGEF11O15085 1522 aa16.74■□□□□ 0.27
SGMS2-206ENST00000504754 ERICH3Q5RHP9 1530 aa16.71■□□□□ 0.27
SGMS2-206ENST00000504754 CHMP7Q8WUX9 453 aaPredicted RBP16.69■□□□□ 0.26
SGMS2-206ENST00000504754 GRIN2AQ12879 1464 aa16.67■□□□□ 0.26
SGMS2-206ENST00000504754 CEP170Q5SW79 1584 aa16.66■□□□□ 0.26
SGMS2-206ENST00000504754 FHAD1B1AJZ9 1412 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms