RNA–Protein interactions for RNA: ENST00000504742.1

SLC4A9-202, Transcript of solute carrier family 4 member 9, humanhuman

TSL 3

Gene SLC4A9, Length 680 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC4A9-202ENST00000504742 NISCHQ9Y2I1 1504 aa32.51■■■□□ 2.8
SLC4A9-202ENST00000504742 ABCC9O60706 1549 aa29.71■■■□□ 2.35
SLC4A9-202ENST00000504742 CCDC180Q9P1Z9 1646 aa29.31■■■□□ 2.28
SLC4A9-202ENST00000504742 DNAJC5BQ9UF47 199 aa28.11■■■□□ 2.09
SLC4A9-202ENST00000504742 RB1CC1Q8TDY2 1594 aa28.09■■■□□ 2.09
SLC4A9-202ENST00000504742 NACADO15069 1562 aa27.79■■■□□ 2.04
SLC4A9-202ENST00000504742 DCAF8L2P0C7V8 631 aa27.74■■■□□ 2.03
SLC4A9-202ENST00000504742 PABPN1Q86U42 306 aaKnown RBP eCLIP27.63■■■□□ 2.01
SLC4A9-202ENST00000504742 UNC13AQ9UPW8 1703 aa27.46■■□□□ 1.99
SLC4A9-202ENST00000504742 BICRAQ9NZM4 1560 aa27.26■■□□□ 1.95
SLC4A9-202ENST00000504742 MYO15BQ96JP2 1530 aa27.23■■□□□ 1.95
SLC4A9-202ENST00000504742 ZCCHC6Q5VYS8 1495 aaKnown RBP26.87■■□□□ 1.89
SLC4A9-202ENST00000504742 SHROOM4Q9ULL8 1493 aa26.8■■□□□ 1.88
SLC4A9-202ENST00000504742 CC2D2AQ9P2K1 1620 aa26.79■■□□□ 1.88
SLC4A9-202ENST00000504742 SCRIBQ14160 1630 aa26.77■■□□□ 1.88
SLC4A9-202ENST00000504742 DCAF1Q9Y4B6 1507 aa26.77■■□□□ 1.88
SLC4A9-202ENST00000504742 CECR2Q9BXF3 1484 aa26.77■■□□□ 1.88
SLC4A9-202ENST00000504742 EIF4G1Q04637 1599 aaKnown RBP26.64■■□□□ 1.86
SLC4A9-202ENST00000504742 DNAJC5Q9H3Z4 198 aa26.04■■□□□ 1.76
SLC4A9-202ENST00000504742 ERCC6Q03468 1493 aa25.69■■□□□ 1.7
SLC4A9-202ENST00000504742 CUX2O14529 1486 aa25.68■■□□□ 1.7
SLC4A9-202ENST00000504742 NCAPD3P42695 1498 aa25.64■■□□□ 1.69
SLC4A9-202ENST00000504742 ATAD2BQ9ULI0 1458 aa25.54■■□□□ 1.68
SLC4A9-202ENST00000504742 SMARCA2P51531 1590 aa25.46■■□□□ 1.67
SLC4A9-202ENST00000504742 SMARCA4P51532 1647 aa25.45■■□□□ 1.67
SLC4A9-202ENST00000504742 HMGXB3Q12766 1538 aa25.43■■□□□ 1.66
SLC4A9-202ENST00000504742 NESP48681 1621 aa25.42■■□□□ 1.66
SLC4A9-202ENST00000504742 BAZ1BQ9UIG0 1483 aaKnown RBP25.32■■□□□ 1.64
SLC4A9-202ENST00000504742 BAZ1AQ9NRL2 1556 aaPredicted RBP25.27■■□□□ 1.64
SLC4A9-202ENST00000504742 THOC2Q8NI27 1593 aaKnown RBP25.19■■□□□ 1.62
SLC4A9-202ENST00000504742 PEG3Q9GZU2 1588 aa25.14■■□□□ 1.62
SLC4A9-202ENST00000504742 LAMC3Q9Y6N6 1575 aa25.14■■□□□ 1.62
SLC4A9-202ENST00000504742 KIF21AQ7Z4S6 1674 aa25.08■■□□□ 1.61
SLC4A9-202ENST00000504742 MROH2BQ7Z745 1585 aa25.07■■□□□ 1.6
SLC4A9-202ENST00000504742 PDS5BQ9NTI5 1447 aa25.03■■□□□ 1.6
SLC4A9-202ENST00000504742 TRIM41Q8WV44 630 aa24.89■■□□□ 1.58
SLC4A9-202ENST00000504742 CADPSQ9ULU8 1353 aa24.87■■□□□ 1.57
SLC4A9-202ENST00000504742 MRC2Q9UBG0 1479 aa24.84■■□□□ 1.57
SLC4A9-202ENST00000504742 WIZO95785 1651 aa24.78■■□□□ 1.56
SLC4A9-202ENST00000504742 WDR62O43379 1518 aa24.76■■□□□ 1.55
SLC4A9-202ENST00000504742 CEP164Q9UPV0 1460 aa24.68■■□□□ 1.54
SLC4A9-202ENST00000504742 FANCD2Q9BXW9 1451 aa24.62■■□□□ 1.53
SLC4A9-202ENST00000504742 CFTRP13569 1480 aa24.51■■□□□ 1.51
SLC4A9-202ENST00000504742 OSCARQ8IYS5 282 aa24.49■■□□□ 1.51
SLC4A9-202ENST00000504742 URB2Q14146 1524 aaKnown RBP24.42■■□□□ 1.5
SLC4A9-202ENST00000504742 TOP2AP11388 1531 aaKnown RBP24.41■■□□□ 1.5
SLC4A9-202ENST00000504742 RSF1Q96T23 1441 aaPredicted RBP24.41■■□□□ 1.5
SLC4A9-202ENST00000504742 PRDM2Q13029 1718 aa24.27■■□□□ 1.48
SLC4A9-202ENST00000504742 RIMBP3CA6NJZ7 1639 aa24.21■■□□□ 1.47
SLC4A9-202ENST00000504742 RIMBP3BA6NNM3 1639 aa24.21■■□□□ 1.47
SLC4A9-202ENST00000504742 RIMBP3Q9UFD9 1639 aa24.21■■□□□ 1.47
SLC4A9-202ENST00000504742 ZNF608Q9ULD9 1512 aaPredicted RBP24.2■■□□□ 1.46
SLC4A9-202ENST00000504742 IFT140Q96RY7 1462 aa24.18■■□□□ 1.46
SLC4A9-202ENST00000504742 CCDC88BA6NC98 1476 aa24.15■■□□□ 1.46
SLC4A9-202ENST00000504742 TOPBP1Q92547 1522 aa24.1■■□□□ 1.45
SLC4A9-202ENST00000504742 ARHGEF11O15085 1522 aa24.09■■□□□ 1.45
SLC4A9-202ENST00000504742 EIF4G3O43432 1585 aaKnown RBP24.05■■□□□ 1.44
SLC4A9-202ENST00000504742 ABCC8Q09428 1581 aa24■■□□□ 1.43
SLC4A9-202ENST00000504742 DNMBPQ6XZF7 1577 aa23.99■■□□□ 1.43
SLC4A9-202ENST00000504742 CYB5RLQ6IPT4 315 aa23.98■■□□□ 1.43
SLC4A9-202ENST00000504742 CHD1O14646 1710 aa23.96■■□□□ 1.43
SLC4A9-202ENST00000504742 AQRO60306 1485 aaKnown RBP eCLIP23.94■■□□□ 1.42
SLC4A9-202ENST00000504742 FBLN2P98095 1184 aa23.93■■□□□ 1.42
SLC4A9-202ENST00000504742 TARBP1Q13395 1621 aaKnown RBP23.9■■□□□ 1.42
SLC4A9-202ENST00000504742 TRHP20396 242 aaPredicted RBP23.87■■□□□ 1.41
SLC4A9-202ENST00000504742 POLA1P09884 1462 aaPredicted RBP23.84■■□□□ 1.41
SLC4A9-202ENST00000504742 ARAP1Q96P48 1450 aa23.83■■□□□ 1.41
SLC4A9-202ENST00000504742 RAD54L2Q9Y4B4 1467 aa23.79■■□□□ 1.4
SLC4A9-202ENST00000504742 TDRD9Q8NDG6 1382 aaKnown RBP23.75■■□□□ 1.39
SLC4A9-202ENST00000504742 SOGA1O94964 1423 aa23.75■■□□□ 1.39
SLC4A9-202ENST00000504742 SNAPC4Q5SXM2 1469 aa23.69■■□□□ 1.38
SLC4A9-202ENST00000504742 FGD5Q6ZNL6 1462 aa23.67■■□□□ 1.38
SLC4A9-202ENST00000504742 CHMP7Q8WUX9 453 aaPredicted RBP23.65■■□□□ 1.38
SLC4A9-202ENST00000504742 CLASP1Q7Z460 1538 aa23.62■■□□□ 1.37
SLC4A9-202ENST00000504742 SYNJ1O43426 1573 aa23.61■■□□□ 1.37
SLC4A9-202ENST00000504742 WDR97A6NE52 1622 aa23.61■■□□□ 1.37
SLC4A9-202ENST00000504742 MAGI1Q96QZ7 1491 aaPredicted RBP23.58■■□□□ 1.37
SLC4A9-202ENST00000504742 CUX1P39880 1505 aa23.58■■□□□ 1.36
SLC4A9-202ENST00000504742 GRIN2BQ13224 1484 aa23.56■■□□□ 1.36
SLC4A9-202ENST00000504742 SYNJ2O15056 1496 aa23.52■■□□□ 1.36
SLC4A9-202ENST00000504742 PBRM1Q86U86 1689 aa23.48■■□□□ 1.35
SLC4A9-202ENST00000504742 GAPVD1Q14C86 1478 aa23.44■■□□□ 1.34
SLC4A9-202ENST00000504742 AEBP2Q6ZN18 517 aaPredicted RBP23.42■■□□□ 1.34
SLC4A9-202ENST00000504742 ABCA5Q8WWZ7 1642 aa23.34■■□□□ 1.33
SLC4A9-202ENST00000504742 ABCA10Q8WWZ4 1543 aa23.33■■□□□ 1.33
SLC4A9-202ENST00000504742 ERCC6L2Q5T890 1561 aa23.27■■□□□ 1.32
SLC4A9-202ENST00000504742 GRIN2AQ12879 1464 aa23.25■■□□□ 1.31
SLC4A9-202ENST00000504742 SUPT5HO00267 1087 aaKnown RBP23.21■■□□□ 1.31
SLC4A9-202ENST00000504742 ADAMTS12P58397 1594 aa23.21■■□□□ 1.31
SLC4A9-202ENST00000504742 CEP170Q5SW79 1584 aa23.2■■□□□ 1.3
SLC4A9-202ENST00000504742 WRNQ14191 1432 aaPredicted RBP eCLIP23.2■■□□□ 1.3
SLC4A9-202ENST00000504742 NUP160Q12769 1436 aa23.16■■□□□ 1.3
SLC4A9-202ENST00000504742 FHAD1B1AJZ9 1412 aa23.11■■□□□ 1.29
SLC4A9-202ENST00000504742 TOP2BQ02880 1626 aa23.1■■□□□ 1.29
SLC4A9-202ENST00000504742 SHROOM2Q13796 1616 aa23.1■■□□□ 1.29
SLC4A9-202ENST00000504742 BIVM-ERCC5R4GMW8 1640 aa23.1■■□□□ 1.29
SLC4A9-202ENST00000504742 ERICH3Q5RHP9 1530 aa23.04■■□□□ 1.28
SLC4A9-202ENST00000504742 PRG4Q92954 1404 aaPredicted RBP23.02■■□□□ 1.28
SLC4A9-202ENST00000504742 KIF13AQ9H1H9 1805 aa23■■□□□ 1.27
SLC4A9-202ENST00000504742 JPH4Q96JJ6 628 aa22.96■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 83.6 ms