RNA–Protein interactions for RNA: ENST00000504720.5

THBS4-202, Transcript of thrombospondin 4, humanhuman

TSL 2

Gene THBS4, Length 853 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS4-202ENST00000504720 NISCHQ9Y2I1 1504 aa28.71■■■□□ 2.19
THBS4-202ENST00000504720 CCDC180Q9P1Z9 1646 aa25.54■■□□□ 1.68
THBS4-202ENST00000504720 ABCC9O60706 1549 aa24.8■■□□□ 1.56
THBS4-202ENST00000504720 ZCCHC6Q5VYS8 1495 aaKnown RBP23.98■■□□□ 1.43
THBS4-202ENST00000504720 NACADO15069 1562 aa23.95■■□□□ 1.42
THBS4-202ENST00000504720 RB1CC1Q8TDY2 1594 aa23.94■■□□□ 1.42
THBS4-202ENST00000504720 MYO15BQ96JP2 1530 aa23.88■■□□□ 1.41
THBS4-202ENST00000504720 DCAF1Q9Y4B6 1507 aa23.8■■□□□ 1.4
THBS4-202ENST00000504720 DCAF8L2P0C7V8 631 aa23.69■■□□□ 1.38
THBS4-202ENST00000504720 UNC13AQ9UPW8 1703 aa23.45■■□□□ 1.34
THBS4-202ENST00000504720 BICRAQ9NZM4 1560 aa23.27■■□□□ 1.32
THBS4-202ENST00000504720 SCRIBQ14160 1630 aa23.25■■□□□ 1.31
THBS4-202ENST00000504720 PABPN1Q86U42 306 aaKnown RBP eCLIP23.11■■□□□ 1.29
THBS4-202ENST00000504720 SHROOM4Q9ULL8 1493 aa23.05■■□□□ 1.28
THBS4-202ENST00000504720 DNAJC5BQ9UF47 199 aa22.66■■□□□ 1.22
THBS4-202ENST00000504720 EIF4G1Q04637 1599 aaKnown RBP22.61■■□□□ 1.21
THBS4-202ENST00000504720 CC2D2AQ9P2K1 1620 aa22.48■■□□□ 1.19
THBS4-202ENST00000504720 CECR2Q9BXF3 1484 aa22.34■■□□□ 1.17
THBS4-202ENST00000504720 SMARCA4P51532 1647 aa22.28■■□□□ 1.16
THBS4-202ENST00000504720 BAZ1AQ9NRL2 1556 aaPredicted RBP22.24■■□□□ 1.15
THBS4-202ENST00000504720 MROH2BQ7Z745 1585 aa22.12■■□□□ 1.13
THBS4-202ENST00000504720 ATAD2BQ9ULI0 1458 aa22.1■■□□□ 1.13
THBS4-202ENST00000504720 PEG3Q9GZU2 1588 aa22.1■■□□□ 1.13
THBS4-202ENST00000504720 NCAPD3P42695 1498 aa22.09■■□□□ 1.13
THBS4-202ENST00000504720 SMARCA2P51531 1590 aa22.08■■□□□ 1.13
THBS4-202ENST00000504720 HMGXB3Q12766 1538 aa22.03■■□□□ 1.12
THBS4-202ENST00000504720 BAZ1BQ9UIG0 1483 aaKnown RBP21.9■■□□□ 1.1
THBS4-202ENST00000504720 RSF1Q96T23 1441 aaPredicted RBP21.89■■□□□ 1.09
THBS4-202ENST00000504720 WIZO95785 1651 aa21.88■■□□□ 1.09
THBS4-202ENST00000504720 TOP2AP11388 1531 aaKnown RBP21.69■■□□□ 1.06
THBS4-202ENST00000504720 NESP48681 1621 aa21.51■■□□□ 1.03
THBS4-202ENST00000504720 LAMC3Q9Y6N6 1575 aa21.49■■□□□ 1.03
THBS4-202ENST00000504720 CADPSQ9ULU8 1353 aa21.4■■□□□ 1.02
THBS4-202ENST00000504720 CCDC88BA6NC98 1476 aa21.38■■□□□ 1.01
THBS4-202ENST00000504720 CFTRP13569 1480 aa21.34■■□□□ 1.01
THBS4-202ENST00000504720 ERCC6Q03468 1493 aa21.34■■□□□ 1.01
THBS4-202ENST00000504720 KIF21AQ7Z4S6 1674 aa21.3■■□□□ 1
THBS4-202ENST00000504720 PDS5BQ9NTI5 1447 aa21.29■■□□□ 1
THBS4-202ENST00000504720 THOC2Q8NI27 1593 aaKnown RBP21.25■□□□□ 0.99
THBS4-202ENST00000504720 PRDM2Q13029 1718 aa21.24■□□□□ 0.99
THBS4-202ENST00000504720 SUPT5HO00267 1087 aaKnown RBP21.23■□□□□ 0.99
THBS4-202ENST00000504720 FANCD2Q9BXW9 1451 aa21.18■□□□□ 0.98
THBS4-202ENST00000504720 CUX2O14529 1486 aa21.16■□□□□ 0.98
THBS4-202ENST00000504720 CEP164Q9UPV0 1460 aa21.14■□□□□ 0.98
THBS4-202ENST00000504720 MRC2Q9UBG0 1479 aa21.11■□□□□ 0.97
THBS4-202ENST00000504720 WDR62O43379 1518 aa21.09■□□□□ 0.97
THBS4-202ENST00000504720 URB2Q14146 1524 aaKnown RBP20.99■□□□□ 0.95
THBS4-202ENST00000504720 DNMBPQ6XZF7 1577 aa20.87■□□□□ 0.93
THBS4-202ENST00000504720 TOPBP1Q92547 1522 aa20.87■□□□□ 0.93
THBS4-202ENST00000504720 ABCC8Q09428 1581 aa20.83■□□□□ 0.92
THBS4-202ENST00000504720 CUX1P39880 1505 aa20.76■□□□□ 0.91
THBS4-202ENST00000504720 POLA1P09884 1462 aaPredicted RBP20.7■□□□□ 0.9
THBS4-202ENST00000504720 IFT140Q96RY7 1462 aa20.7■□□□□ 0.9
THBS4-202ENST00000504720 TARBP1Q13395 1621 aaKnown RBP20.67■□□□□ 0.9
THBS4-202ENST00000504720 FGD5Q6ZNL6 1462 aa20.65■□□□□ 0.9
THBS4-202ENST00000504720 BIVM-ERCC5R4GMW8 1640 aa20.63■□□□□ 0.89
THBS4-202ENST00000504720 SYNJ1O43426 1573 aa20.62■□□□□ 0.89
THBS4-202ENST00000504720 TOP2BQ02880 1626 aa20.61■□□□□ 0.89
THBS4-202ENST00000504720 ZNF608Q9ULD9 1512 aaPredicted RBP20.61■□□□□ 0.89
THBS4-202ENST00000504720 WRNQ14191 1432 aaPredicted RBP eCLIP20.61■□□□□ 0.89
THBS4-202ENST00000504720 EIF4G3O43432 1585 aaKnown RBP20.58■□□□□ 0.88
THBS4-202ENST00000504720 RAD54L2Q9Y4B4 1467 aa20.57■□□□□ 0.88
THBS4-202ENST00000504720 WDR97A6NE52 1622 aa20.56■□□□□ 0.88
THBS4-202ENST00000504720 SOGA1O94964 1423 aa20.54■□□□□ 0.88
THBS4-202ENST00000504720 ABCA10Q8WWZ4 1543 aa20.48■□□□□ 0.87
THBS4-202ENST00000504720 AQRO60306 1485 aaKnown RBP eCLIP20.46■□□□□ 0.87
THBS4-202ENST00000504720 DNAJC5Q9H3Z4 198 aa20.45■□□□□ 0.86
THBS4-202ENST00000504720 ABCA5Q8WWZ7 1642 aa20.43■□□□□ 0.86
THBS4-202ENST00000504720 TDRD9Q8NDG6 1382 aaKnown RBP20.42■□□□□ 0.86
THBS4-202ENST00000504720 PBRM1Q86U86 1689 aa20.35■□□□□ 0.85
THBS4-202ENST00000504720 GRIN2BQ13224 1484 aa20.34■□□□□ 0.85
THBS4-202ENST00000504720 GAPVD1Q14C86 1478 aa20.34■□□□□ 0.85
THBS4-202ENST00000504720 SNAPC4Q5SXM2 1469 aa20.31■□□□□ 0.84
THBS4-202ENST00000504720 MAGI1Q96QZ7 1491 aaPredicted RBP20.3■□□□□ 0.84
THBS4-202ENST00000504720 CHD1O14646 1710 aa20.28■□□□□ 0.84
THBS4-202ENST00000504720 ERICH3Q5RHP9 1530 aa20.23■□□□□ 0.83
THBS4-202ENST00000504720 ADAMTS12P58397 1594 aa20.22■□□□□ 0.83
THBS4-202ENST00000504720 SYNJ2O15056 1496 aa20.21■□□□□ 0.83
THBS4-202ENST00000504720 OSCARQ8IYS5 282 aa20.16■□□□□ 0.82
THBS4-202ENST00000504720 KIF27Q86VH2 1401 aa20.15■□□□□ 0.82
THBS4-202ENST00000504720 FHAD1B1AJZ9 1412 aa20.11■□□□□ 0.81
THBS4-202ENST00000504720 CLASP1Q7Z460 1538 aa20.1■□□□□ 0.81
THBS4-202ENST00000504720 GRIN2AQ12879 1464 aa20.1■□□□□ 0.81
THBS4-202ENST00000504720 CUL7Q14999 1698 aa20.07■□□□□ 0.8
THBS4-202ENST00000504720 FBLN2P98095 1184 aa20.07■□□□□ 0.8
THBS4-202ENST00000504720 IGF1RP08069 1367 aa20.07■□□□□ 0.8
THBS4-202ENST00000504720 CHMP7Q8WUX9 453 aaPredicted RBP20.06■□□□□ 0.8
THBS4-202ENST00000504720 TRIM41Q8WV44 630 aa20.05■□□□□ 0.8
THBS4-202ENST00000504720 CEP170Q5SW79 1584 aa20.03■□□□□ 0.8
THBS4-202ENST00000504720 NUP160Q12769 1436 aa20.02■□□□□ 0.8
THBS4-202ENST00000504720 RUSC2Q8N2Y8 1516 aa20.02■□□□□ 0.79
THBS4-202ENST00000504720 ARHGEF11O15085 1522 aa19.97■□□□□ 0.79
THBS4-202ENST00000504720 RIMBP3CA6NJZ7 1639 aa19.96■□□□□ 0.79
THBS4-202ENST00000504720 RIMBP3BA6NNM3 1639 aa19.96■□□□□ 0.79
THBS4-202ENST00000504720 RIMBP3Q9UFD9 1639 aa19.96■□□□□ 0.79
THBS4-202ENST00000504720 CHIC1Q5VXU3 224 aa19.92■□□□□ 0.78
THBS4-202ENST00000504720 CARMIL1Q5VZK9 1371 aa19.92■□□□□ 0.78
THBS4-202ENST00000504720 SHROOM2Q13796 1616 aa19.91■□□□□ 0.78
THBS4-202ENST00000504720 PRXQ9BXM0 1461 aa19.85■□□□□ 0.77
THBS4-202ENST00000504720 RAPGEF2Q9Y4G8 1499 aa19.85■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms