RNA–Protein interactions for RNA: ENST00000504666.5

SIL1-205, Transcript of SIL1 nucleotide exchange factor, humanhuman

TSL 2

Gene SIL1, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIL1-205ENST00000504666 NISCHQ9Y2I1 1504 aa32.58■■■□□ 2.81
SIL1-205ENST00000504666 ABCC9O60706 1549 aa29.01■■■□□ 2.23
SIL1-205ENST00000504666 CCDC180Q9P1Z9 1646 aa28.99■■■□□ 2.23
SIL1-205ENST00000504666 RB1CC1Q8TDY2 1594 aa27.6■■■□□ 2.01
SIL1-205ENST00000504666 DCAF8L2P0C7V8 631 aa27.38■■□□□ 1.97
SIL1-205ENST00000504666 NACADO15069 1562 aa27.35■■□□□ 1.97
SIL1-205ENST00000504666 ZCCHC6Q5VYS8 1495 aaKnown RBP27.25■■□□□ 1.95
SIL1-205ENST00000504666 DCAF1Q9Y4B6 1507 aa27.02■■□□□ 1.92
SIL1-205ENST00000504666 DNAJC5BQ9UF47 199 aa27■■□□□ 1.91
SIL1-205ENST00000504666 UNC13AQ9UPW8 1703 aa26.99■■□□□ 1.91
SIL1-205ENST00000504666 PABPN1Q86U42 306 aaKnown RBP eCLIP26.99■■□□□ 1.91
SIL1-205ENST00000504666 MYO15BQ96JP2 1530 aa26.96■■□□□ 1.91
SIL1-205ENST00000504666 BICRAQ9NZM4 1560 aa26.71■■□□□ 1.87
SIL1-205ENST00000504666 SCRIBQ14160 1630 aa26.53■■□□□ 1.84
SIL1-205ENST00000504666 SHROOM4Q9ULL8 1493 aa26.34■■□□□ 1.81
SIL1-205ENST00000504666 CC2D2AQ9P2K1 1620 aa26.17■■□□□ 1.78
SIL1-205ENST00000504666 EIF4G1Q04637 1599 aaKnown RBP26.12■■□□□ 1.77
SIL1-205ENST00000504666 CECR2Q9BXF3 1484 aa26.09■■□□□ 1.77
SIL1-205ENST00000504666 SMARCA4P51532 1647 aa25.23■■□□□ 1.63
SIL1-205ENST00000504666 BAZ1AQ9NRL2 1556 aaPredicted RBP25.22■■□□□ 1.63
SIL1-205ENST00000504666 NCAPD3P42695 1498 aa25.18■■□□□ 1.62
SIL1-205ENST00000504666 ATAD2BQ9ULI0 1458 aa25.17■■□□□ 1.62
SIL1-205ENST00000504666 SMARCA2P51531 1590 aa25.15■■□□□ 1.62
SIL1-205ENST00000504666 ERCC6Q03468 1493 aa25.11■■□□□ 1.61
SIL1-205ENST00000504666 MROH2BQ7Z745 1585 aa25.09■■□□□ 1.61
SIL1-205ENST00000504666 HMGXB3Q12766 1538 aa25.08■■□□□ 1.61
SIL1-205ENST00000504666 RSF1Q96T23 1441 aaPredicted RBP25.05■■□□□ 1.6
SIL1-205ENST00000504666 BAZ1BQ9UIG0 1483 aaKnown RBP25.02■■□□□ 1.6
SIL1-205ENST00000504666 CUX2O14529 1486 aa24.92■■□□□ 1.58
SIL1-205ENST00000504666 PEG3Q9GZU2 1588 aa24.9■■□□□ 1.58
SIL1-205ENST00000504666 NESP48681 1621 aa24.9■■□□□ 1.58
SIL1-205ENST00000504666 SUPT5HO00267 1087 aaKnown RBP24.84■■□□□ 1.57
SIL1-205ENST00000504666 DNAJC5Q9H3Z4 198 aa24.77■■□□□ 1.56
SIL1-205ENST00000504666 WIZO95785 1651 aa24.77■■□□□ 1.56
SIL1-205ENST00000504666 LAMC3Q9Y6N6 1575 aa24.71■■□□□ 1.55
SIL1-205ENST00000504666 THOC2Q8NI27 1593 aaKnown RBP24.64■■□□□ 1.54
SIL1-205ENST00000504666 KIF21AQ7Z4S6 1674 aa24.64■■□□□ 1.53
SIL1-205ENST00000504666 TOP2AP11388 1531 aaKnown RBP24.63■■□□□ 1.53
SIL1-205ENST00000504666 PDS5BQ9NTI5 1447 aa24.56■■□□□ 1.52
SIL1-205ENST00000504666 CADPSQ9ULU8 1353 aa24.46■■□□□ 1.51
SIL1-205ENST00000504666 MRC2Q9UBG0 1479 aa24.38■■□□□ 1.49
SIL1-205ENST00000504666 CCDC88BA6NC98 1476 aa24.36■■□□□ 1.49
SIL1-205ENST00000504666 CEP164Q9UPV0 1460 aa24.32■■□□□ 1.48
SIL1-205ENST00000504666 WDR62O43379 1518 aa24.29■■□□□ 1.48
SIL1-205ENST00000504666 FANCD2Q9BXW9 1451 aa24.26■■□□□ 1.47
SIL1-205ENST00000504666 CFTRP13569 1480 aa24.19■■□□□ 1.46
SIL1-205ENST00000504666 PRDM2Q13029 1718 aa24.09■■□□□ 1.45
SIL1-205ENST00000504666 URB2Q14146 1524 aaKnown RBP24.03■■□□□ 1.44
SIL1-205ENST00000504666 TRIM41Q8WV44 630 aa23.93■■□□□ 1.42
SIL1-205ENST00000504666 TOPBP1Q92547 1522 aa23.79■■□□□ 1.4
SIL1-205ENST00000504666 IFT140Q96RY7 1462 aa23.78■■□□□ 1.4
SIL1-205ENST00000504666 OSCARQ8IYS5 282 aa23.76■■□□□ 1.39
SIL1-205ENST00000504666 ZNF608Q9ULD9 1512 aaPredicted RBP23.74■■□□□ 1.39
SIL1-205ENST00000504666 DNMBPQ6XZF7 1577 aa23.74■■□□□ 1.39
SIL1-205ENST00000504666 ABCC8Q09428 1581 aa23.7■■□□□ 1.38
SIL1-205ENST00000504666 EIF4G3O43432 1585 aaKnown RBP23.69■■□□□ 1.38
SIL1-205ENST00000504666 WRNQ14191 1432 aaPredicted RBP eCLIP23.62■■□□□ 1.37
SIL1-205ENST00000504666 TARBP1Q13395 1621 aaKnown RBP23.55■■□□□ 1.36
SIL1-205ENST00000504666 POLA1P09884 1462 aaPredicted RBP23.55■■□□□ 1.36
SIL1-205ENST00000504666 RIMBP3CA6NJZ7 1639 aa23.54■■□□□ 1.36
SIL1-205ENST00000504666 RIMBP3BA6NNM3 1639 aa23.54■■□□□ 1.36
SIL1-205ENST00000504666 RIMBP3Q9UFD9 1639 aa23.54■■□□□ 1.36
SIL1-205ENST00000504666 AQRO60306 1485 aaKnown RBP eCLIP23.53■■□□□ 1.36
SIL1-205ENST00000504666 CHD1O14646 1710 aa23.53■■□□□ 1.36
SIL1-205ENST00000504666 CHIC1Q5VXU3 224 aa23.52■■□□□ 1.36
SIL1-205ENST00000504666 CUX1P39880 1505 aa23.5■■□□□ 1.35
SIL1-205ENST00000504666 RAD54L2Q9Y4B4 1467 aa23.48■■□□□ 1.35
SIL1-205ENST00000504666 FBLN2P98095 1184 aa23.47■■□□□ 1.35
SIL1-205ENST00000504666 ARHGEF11O15085 1522 aa23.44■■□□□ 1.34
SIL1-205ENST00000504666 FGD5Q6ZNL6 1462 aa23.44■■□□□ 1.34
SIL1-205ENST00000504666 TOP2BQ02880 1626 aa23.44■■□□□ 1.34
SIL1-205ENST00000504666 SOGA1O94964 1423 aa23.43■■□□□ 1.34
SIL1-205ENST00000504666 SYNJ1O43426 1573 aa23.42■■□□□ 1.34
SIL1-205ENST00000504666 BIVM-ERCC5R4GMW8 1640 aa23.4■■□□□ 1.34
SIL1-205ENST00000504666 TDRD9Q8NDG6 1382 aaKnown RBP23.4■■□□□ 1.34
SIL1-205ENST00000504666 SNAPC4Q5SXM2 1469 aa23.35■■□□□ 1.33
SIL1-205ENST00000504666 WDR97A6NE52 1622 aa23.33■■□□□ 1.32
SIL1-205ENST00000504666 CYB5RLQ6IPT4 315 aa23.27■■□□□ 1.32
SIL1-205ENST00000504666 PBRM1Q86U86 1689 aa23.25■■□□□ 1.31
SIL1-205ENST00000504666 GRIN2BQ13224 1484 aa23.24■■□□□ 1.31
SIL1-205ENST00000504666 CHMP7Q8WUX9 453 aaPredicted RBP23.24■■□□□ 1.31
SIL1-205ENST00000504666 MAGI1Q96QZ7 1491 aaPredicted RBP23.23■■□□□ 1.31
SIL1-205ENST00000504666 ARAP1Q96P48 1450 aa23.2■■□□□ 1.3
SIL1-205ENST00000504666 ABCA10Q8WWZ4 1543 aa23.18■■□□□ 1.3
SIL1-205ENST00000504666 GAPVD1Q14C86 1478 aa23.17■■□□□ 1.3
SIL1-205ENST00000504666 SYNJ2O15056 1496 aa23.16■■□□□ 1.3
SIL1-205ENST00000504666 CLASP1Q7Z460 1538 aa23.15■■□□□ 1.3
SIL1-205ENST00000504666 ABCA5Q8WWZ7 1642 aa23.12■■□□□ 1.29
SIL1-205ENST00000504666 KIF27Q86VH2 1401 aa23.11■■□□□ 1.29
SIL1-205ENST00000504666 TRHP20396 242 aaPredicted RBP23.09■■□□□ 1.29
SIL1-205ENST00000504666 EEA1Q15075 1411 aa23.06■■□□□ 1.28
SIL1-205ENST00000504666 ADAMTS12P58397 1594 aa22.98■■□□□ 1.27
SIL1-205ENST00000504666 RUSC2Q8N2Y8 1516 aa22.96■■□□□ 1.27
SIL1-205ENST00000504666 GRIN2AQ12879 1464 aa22.95■■□□□ 1.26
SIL1-205ENST00000504666 CSRNP3Q8WYN3 585 aa22.95■■□□□ 1.26
SIL1-205ENST00000504666 IGF1RP08069 1367 aa22.94■■□□□ 1.26
SIL1-205ENST00000504666 FAM9AQ8IZU1 332 aaPredicted RBP22.92■■□□□ 1.26
SIL1-205ENST00000504666 ERICH3Q5RHP9 1530 aa22.92■■□□□ 1.26
SIL1-205ENST00000504666 CEP170Q5SW79 1584 aa22.89■■□□□ 1.25
SIL1-205ENST00000504666 FHAD1B1AJZ9 1412 aa22.86■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 94.2 ms