RNA–Protein interactions for RNA: ENST00000504522.1

SH3RF2-203, Transcript of SH3 domain containing ring finger 2, humanhuman

TSL 3

Gene SH3RF2, Length 678 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF2-203ENST00000504522 NISCHQ9Y2I1 1504 aa29.47■■■□□ 2.31
SH3RF2-203ENST00000504522 CCDC180Q9P1Z9 1646 aa26.15■■□□□ 1.78
SH3RF2-203ENST00000504522 ABCC9O60706 1549 aa25.42■■□□□ 1.66
SH3RF2-203ENST00000504522 ZCCHC6Q5VYS8 1495 aaKnown RBP24.57■■□□□ 1.52
SH3RF2-203ENST00000504522 NACADO15069 1562 aa24.54■■□□□ 1.52
SH3RF2-203ENST00000504522 RB1CC1Q8TDY2 1594 aa24.52■■□□□ 1.52
SH3RF2-203ENST00000504522 MYO15BQ96JP2 1530 aa24.49■■□□□ 1.51
SH3RF2-203ENST00000504522 DCAF1Q9Y4B6 1507 aa24.42■■□□□ 1.5
SH3RF2-203ENST00000504522 DCAF8L2P0C7V8 631 aa24.41■■□□□ 1.5
SH3RF2-203ENST00000504522 UNC13AQ9UPW8 1703 aa24.07■■□□□ 1.44
SH3RF2-203ENST00000504522 BICRAQ9NZM4 1560 aa23.87■■□□□ 1.41
SH3RF2-203ENST00000504522 SCRIBQ14160 1630 aa23.81■■□□□ 1.4
SH3RF2-203ENST00000504522 PABPN1Q86U42 306 aaKnown RBP eCLIP23.76■■□□□ 1.39
SH3RF2-203ENST00000504522 SHROOM4Q9ULL8 1493 aa23.56■■□□□ 1.36
SH3RF2-203ENST00000504522 DNAJC5BQ9UF47 199 aa23.33■■□□□ 1.33
SH3RF2-203ENST00000504522 EIF4G1Q04637 1599 aaKnown RBP23.17■■□□□ 1.3
SH3RF2-203ENST00000504522 CC2D2AQ9P2K1 1620 aa23.04■■□□□ 1.28
SH3RF2-203ENST00000504522 CECR2Q9BXF3 1484 aa22.95■■□□□ 1.26
SH3RF2-203ENST00000504522 SMARCA4P51532 1647 aa22.83■■□□□ 1.25
SH3RF2-203ENST00000504522 BAZ1AQ9NRL2 1556 aaPredicted RBP22.8■■□□□ 1.24
SH3RF2-203ENST00000504522 MROH2BQ7Z745 1585 aa22.72■■□□□ 1.23
SH3RF2-203ENST00000504522 ATAD2BQ9ULI0 1458 aa22.68■■□□□ 1.22
SH3RF2-203ENST00000504522 NCAPD3P42695 1498 aa22.67■■□□□ 1.22
SH3RF2-203ENST00000504522 PEG3Q9GZU2 1588 aa22.66■■□□□ 1.22
SH3RF2-203ENST00000504522 SMARCA2P51531 1590 aa22.63■■□□□ 1.21
SH3RF2-203ENST00000504522 HMGXB3Q12766 1538 aa22.56■■□□□ 1.2
SH3RF2-203ENST00000504522 RSF1Q96T23 1441 aaPredicted RBP22.49■■□□□ 1.19
SH3RF2-203ENST00000504522 WIZO95785 1651 aa22.47■■□□□ 1.19
SH3RF2-203ENST00000504522 BAZ1BQ9UIG0 1483 aaKnown RBP22.45■■□□□ 1.18
SH3RF2-203ENST00000504522 TOP2AP11388 1531 aaKnown RBP22.21■■□□□ 1.15
SH3RF2-203ENST00000504522 NESP48681 1621 aa22.08■■□□□ 1.13
SH3RF2-203ENST00000504522 LAMC3Q9Y6N6 1575 aa22.03■■□□□ 1.12
SH3RF2-203ENST00000504522 CADPSQ9ULU8 1353 aa21.98■■□□□ 1.11
SH3RF2-203ENST00000504522 CCDC88BA6NC98 1476 aa21.97■■□□□ 1.11
SH3RF2-203ENST00000504522 CFTRP13569 1480 aa21.9■■□□□ 1.1
SH3RF2-203ENST00000504522 SUPT5HO00267 1087 aaKnown RBP21.88■■□□□ 1.09
SH3RF2-203ENST00000504522 ERCC6Q03468 1493 aa21.84■■□□□ 1.09
SH3RF2-203ENST00000504522 KIF21AQ7Z4S6 1674 aa21.83■■□□□ 1.09
SH3RF2-203ENST00000504522 PDS5BQ9NTI5 1447 aa21.82■■□□□ 1.08
SH3RF2-203ENST00000504522 PRDM2Q13029 1718 aa21.75■■□□□ 1.07
SH3RF2-203ENST00000504522 THOC2Q8NI27 1593 aaKnown RBP21.74■■□□□ 1.07
SH3RF2-203ENST00000504522 FANCD2Q9BXW9 1451 aa21.71■■□□□ 1.07
SH3RF2-203ENST00000504522 CUX2O14529 1486 aa21.64■■□□□ 1.06
SH3RF2-203ENST00000504522 CEP164Q9UPV0 1460 aa21.64■■□□□ 1.06
SH3RF2-203ENST00000504522 MRC2Q9UBG0 1479 aa21.61■■□□□ 1.05
SH3RF2-203ENST00000504522 WDR62O43379 1518 aa21.58■■□□□ 1.04
SH3RF2-203ENST00000504522 URB2Q14146 1524 aaKnown RBP21.53■■□□□ 1.04
SH3RF2-203ENST00000504522 TOPBP1Q92547 1522 aa21.39■■□□□ 1.02
SH3RF2-203ENST00000504522 ABCC8Q09428 1581 aa21.38■■□□□ 1.01
SH3RF2-203ENST00000504522 DNMBPQ6XZF7 1577 aa21.38■■□□□ 1.01
SH3RF2-203ENST00000504522 CUX1P39880 1505 aa21.29■■□□□ 1
SH3RF2-203ENST00000504522 POLA1P09884 1462 aaPredicted RBP21.23■□□□□ 0.99
SH3RF2-203ENST00000504522 IFT140Q96RY7 1462 aa21.21■□□□□ 0.99
SH3RF2-203ENST00000504522 TARBP1Q13395 1621 aaKnown RBP21.21■□□□□ 0.99
SH3RF2-203ENST00000504522 FGD5Q6ZNL6 1462 aa21.17■□□□□ 0.98
SH3RF2-203ENST00000504522 BIVM-ERCC5R4GMW8 1640 aa21.15■□□□□ 0.98
SH3RF2-203ENST00000504522 WRNQ14191 1432 aaPredicted RBP eCLIP21.15■□□□□ 0.98
SH3RF2-203ENST00000504522 TOP2BQ02880 1626 aa21.15■□□□□ 0.98
SH3RF2-203ENST00000504522 SYNJ1O43426 1573 aa21.14■□□□□ 0.98
SH3RF2-203ENST00000504522 ZNF608Q9ULD9 1512 aaPredicted RBP21.14■□□□□ 0.98
SH3RF2-203ENST00000504522 RAD54L2Q9Y4B4 1467 aa21.13■□□□□ 0.97
SH3RF2-203ENST00000504522 SOGA1O94964 1423 aa21.11■□□□□ 0.97
SH3RF2-203ENST00000504522 WDR97A6NE52 1622 aa21.06■□□□□ 0.96
SH3RF2-203ENST00000504522 EIF4G3O43432 1585 aaKnown RBP21.05■□□□□ 0.96
SH3RF2-203ENST00000504522 AQRO60306 1485 aaKnown RBP eCLIP21.01■□□□□ 0.95
SH3RF2-203ENST00000504522 ABCA10Q8WWZ4 1543 aa21■□□□□ 0.95
SH3RF2-203ENST00000504522 TDRD9Q8NDG6 1382 aaKnown RBP20.98■□□□□ 0.95
SH3RF2-203ENST00000504522 ABCA5Q8WWZ7 1642 aa20.92■□□□□ 0.94
SH3RF2-203ENST00000504522 DNAJC5Q9H3Z4 198 aa20.88■□□□□ 0.93
SH3RF2-203ENST00000504522 GAPVD1Q14C86 1478 aa20.88■□□□□ 0.93
SH3RF2-203ENST00000504522 GRIN2BQ13224 1484 aa20.85■□□□□ 0.93
SH3RF2-203ENST00000504522 PBRM1Q86U86 1689 aa20.85■□□□□ 0.93
SH3RF2-203ENST00000504522 SNAPC4Q5SXM2 1469 aa20.8■□□□□ 0.92
SH3RF2-203ENST00000504522 MAGI1Q96QZ7 1491 aaPredicted RBP20.79■□□□□ 0.92
SH3RF2-203ENST00000504522 CHD1O14646 1710 aa20.78■□□□□ 0.92
SH3RF2-203ENST00000504522 ERICH3Q5RHP9 1530 aa20.74■□□□□ 0.91
SH3RF2-203ENST00000504522 OSCARQ8IYS5 282 aa20.74■□□□□ 0.91
SH3RF2-203ENST00000504522 CHIC1Q5VXU3 224 aa20.73■□□□□ 0.91
SH3RF2-203ENST00000504522 SYNJ2O15056 1496 aa20.71■□□□□ 0.91
SH3RF2-203ENST00000504522 ADAMTS12P58397 1594 aa20.68■□□□□ 0.9
SH3RF2-203ENST00000504522 KIF27Q86VH2 1401 aa20.68■□□□□ 0.9
SH3RF2-203ENST00000504522 TRIM41Q8WV44 630 aa20.67■□□□□ 0.9
SH3RF2-203ENST00000504522 IGF1RP08069 1367 aa20.65■□□□□ 0.9
SH3RF2-203ENST00000504522 FBLN2P98095 1184 aa20.64■□□□□ 0.89
SH3RF2-203ENST00000504522 FHAD1B1AJZ9 1412 aa20.63■□□□□ 0.89
SH3RF2-203ENST00000504522 CHMP7Q8WUX9 453 aaPredicted RBP20.63■□□□□ 0.89
SH3RF2-203ENST00000504522 RUSC2Q8N2Y8 1516 aa20.61■□□□□ 0.89
SH3RF2-203ENST00000504522 GRIN2AQ12879 1464 aa20.6■□□□□ 0.89
SH3RF2-203ENST00000504522 CLASP1Q7Z460 1538 aa20.58■□□□□ 0.88
SH3RF2-203ENST00000504522 CUL7Q14999 1698 aa20.55■□□□□ 0.88
SH3RF2-203ENST00000504522 NUP160Q12769 1436 aa20.53■□□□□ 0.88
SH3RF2-203ENST00000504522 CEP170Q5SW79 1584 aa20.52■□□□□ 0.88
SH3RF2-203ENST00000504522 CARMIL1Q5VZK9 1371 aa20.48■□□□□ 0.87
SH3RF2-203ENST00000504522 ARHGEF11O15085 1522 aa20.45■□□□□ 0.86
SH3RF2-203ENST00000504522 RIMBP3CA6NJZ7 1639 aa20.45■□□□□ 0.86
SH3RF2-203ENST00000504522 RIMBP3BA6NNM3 1639 aa20.45■□□□□ 0.86
SH3RF2-203ENST00000504522 RIMBP3Q9UFD9 1639 aa20.45■□□□□ 0.86
SH3RF2-203ENST00000504522 SHROOM2Q13796 1616 aa20.39■□□□□ 0.86
SH3RF2-203ENST00000504522 EEA1Q15075 1411 aa20.39■□□□□ 0.85
SH3RF2-203ENST00000504522 PRXQ9BXM0 1461 aa20.38■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms