RNA–Protein interactions for RNA: ENST00000504262.1

PRAMEF31P-201, Transcript of PRAME family member 31, pseudogene, humanhuman

BASIC

Gene PRAMEF31P, Length 1,371 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF31P-201ENST00000504262 NISCHQ9Y2I1 1504 aa27.61■■■□□ 2.01
PRAMEF31P-201ENST00000504262 CCDC180Q9P1Z9 1646 aa24.74■■□□□ 1.55
PRAMEF31P-201ENST00000504262 ABCC9O60706 1549 aa24.44■■□□□ 1.5
PRAMEF31P-201ENST00000504262 RB1CC1Q8TDY2 1594 aa23.37■■□□□ 1.33
PRAMEF31P-201ENST00000504262 NACADO15069 1562 aa23.25■■□□□ 1.31
PRAMEF31P-201ENST00000504262 DCAF8L2P0C7V8 631 aa23.13■■□□□ 1.29
PRAMEF31P-201ENST00000504262 UNC13AQ9UPW8 1703 aa23.04■■□□□ 1.28
PRAMEF31P-201ENST00000504262 MYO15BQ96JP2 1530 aa22.96■■□□□ 1.27
PRAMEF31P-201ENST00000504262 ZCCHC6Q5VYS8 1495 aaKnown RBP22.96■■□□□ 1.27
PRAMEF31P-201ENST00000504262 DCAF1Q9Y4B6 1507 aa22.78■■□□□ 1.24
PRAMEF31P-201ENST00000504262 PABPN1Q86U42 306 aaKnown RBP eCLIP22.75■■□□□ 1.23
PRAMEF31P-201ENST00000504262 BICRAQ9NZM4 1560 aa22.73■■□□□ 1.23
PRAMEF31P-201ENST00000504262 DNAJC5BQ9UF47 199 aa22.63■■□□□ 1.21
PRAMEF31P-201ENST00000504262 SCRIBQ14160 1630 aa22.59■■□□□ 1.21
PRAMEF31P-201ENST00000504262 SHROOM4Q9ULL8 1493 aa22.33■■□□□ 1.17
PRAMEF31P-201ENST00000504262 CC2D2AQ9P2K1 1620 aa22.13■■□□□ 1.13
PRAMEF31P-201ENST00000504262 EIF4G1Q04637 1599 aaKnown RBP22.12■■□□□ 1.13
PRAMEF31P-201ENST00000504262 CECR2Q9BXF3 1484 aa21.95■■□□□ 1.11
PRAMEF31P-201ENST00000504262 SMARCA4P51532 1647 aa21.54■■□□□ 1.04
PRAMEF31P-201ENST00000504262 ATAD2BQ9ULI0 1458 aa21.43■■□□□ 1.02
PRAMEF31P-201ENST00000504262 BAZ1AQ9NRL2 1556 aaPredicted RBP21.42■■□□□ 1.02
PRAMEF31P-201ENST00000504262 NCAPD3P42695 1498 aa21.41■■□□□ 1.02
PRAMEF31P-201ENST00000504262 SMARCA2P51531 1590 aa21.39■■□□□ 1.01
PRAMEF31P-201ENST00000504262 HMGXB3Q12766 1538 aa21.34■■□□□ 1.01
PRAMEF31P-201ENST00000504262 MROH2BQ7Z745 1585 aa21.31■■□□□ 1
PRAMEF31P-201ENST00000504262 PEG3Q9GZU2 1588 aa21.29■■□□□ 1
PRAMEF31P-201ENST00000504262 BAZ1BQ9UIG0 1483 aaKnown RBP21.25■□□□□ 0.99
PRAMEF31P-201ENST00000504262 WIZO95785 1651 aa21.14■□□□□ 0.97
PRAMEF31P-201ENST00000504262 NESP48681 1621 aa21.09■□□□□ 0.97
PRAMEF31P-201ENST00000504262 ERCC6Q03468 1493 aa21.06■□□□□ 0.96
PRAMEF31P-201ENST00000504262 LAMC3Q9Y6N6 1575 aa20.95■□□□□ 0.94
PRAMEF31P-201ENST00000504262 KIF21AQ7Z4S6 1674 aa20.94■□□□□ 0.94
PRAMEF31P-201ENST00000504262 RSF1Q96T23 1441 aaPredicted RBP20.91■□□□□ 0.94
PRAMEF31P-201ENST00000504262 CUX2O14529 1486 aa20.9■□□□□ 0.94
PRAMEF31P-201ENST00000504262 THOC2Q8NI27 1593 aaKnown RBP20.87■□□□□ 0.93
PRAMEF31P-201ENST00000504262 TOP2AP11388 1531 aaKnown RBP20.82■□□□□ 0.92
PRAMEF31P-201ENST00000504262 CADPSQ9ULU8 1353 aa20.77■□□□□ 0.91
PRAMEF31P-201ENST00000504262 PDS5BQ9NTI5 1447 aa20.74■□□□□ 0.91
PRAMEF31P-201ENST00000504262 PRDM2Q13029 1718 aa20.64■□□□□ 0.9
PRAMEF31P-201ENST00000504262 CFTRP13569 1480 aa20.62■□□□□ 0.89
PRAMEF31P-201ENST00000504262 MRC2Q9UBG0 1479 aa20.62■□□□□ 0.89
PRAMEF31P-201ENST00000504262 CEP164Q9UPV0 1460 aa20.59■□□□□ 0.89
PRAMEF31P-201ENST00000504262 FANCD2Q9BXW9 1451 aa20.58■□□□□ 0.89
PRAMEF31P-201ENST00000504262 WDR62O43379 1518 aa20.58■□□□□ 0.89
PRAMEF31P-201ENST00000504262 CCDC88BA6NC98 1476 aa20.55■□□□□ 0.88
PRAMEF31P-201ENST00000504262 DNAJC5Q9H3Z4 198 aa20.53■□□□□ 0.88
PRAMEF31P-201ENST00000504262 URB2Q14146 1524 aaKnown RBP20.43■□□□□ 0.86
PRAMEF31P-201ENST00000504262 TOPBP1Q92547 1522 aa20.25■□□□□ 0.83
PRAMEF31P-201ENST00000504262 DNMBPQ6XZF7 1577 aa20.22■□□□□ 0.83
PRAMEF31P-201ENST00000504262 SUPT5HO00267 1087 aaKnown RBP20.16■□□□□ 0.82
PRAMEF31P-201ENST00000504262 ZNF608Q9ULD9 1512 aaPredicted RBP20.14■□□□□ 0.81
PRAMEF31P-201ENST00000504262 ABCC8Q09428 1581 aa20.14■□□□□ 0.81
PRAMEF31P-201ENST00000504262 IFT140Q96RY7 1462 aa20.13■□□□□ 0.81
PRAMEF31P-201ENST00000504262 EIF4G3O43432 1585 aaKnown RBP20.1■□□□□ 0.81
PRAMEF31P-201ENST00000504262 TARBP1Q13395 1621 aaKnown RBP20.09■□□□□ 0.81
PRAMEF31P-201ENST00000504262 POLA1P09884 1462 aaPredicted RBP20.05■□□□□ 0.8
PRAMEF31P-201ENST00000504262 CUX1P39880 1505 aa20.02■□□□□ 0.79
PRAMEF31P-201ENST00000504262 RAD54L2Q9Y4B4 1467 aa19.98■□□□□ 0.79
PRAMEF31P-201ENST00000504262 FGD5Q6ZNL6 1462 aa19.97■□□□□ 0.79
PRAMEF31P-201ENST00000504262 CHD1O14646 1710 aa19.97■□□□□ 0.79
PRAMEF31P-201ENST00000504262 AQRO60306 1485 aaKnown RBP eCLIP19.95■□□□□ 0.78
PRAMEF31P-201ENST00000504262 WDR97A6NE52 1622 aa19.93■□□□□ 0.78
PRAMEF31P-201ENST00000504262 OSCARQ8IYS5 282 aa19.92■□□□□ 0.78
PRAMEF31P-201ENST00000504262 SOGA1O94964 1423 aa19.91■□□□□ 0.78
PRAMEF31P-201ENST00000504262 TDRD9Q8NDG6 1382 aaKnown RBP19.85■□□□□ 0.77
PRAMEF31P-201ENST00000504262 PBRM1Q86U86 1689 aa19.83■□□□□ 0.77
PRAMEF31P-201ENST00000504262 RIMBP3CA6NJZ7 1639 aa19.81■□□□□ 0.76
PRAMEF31P-201ENST00000504262 RIMBP3BA6NNM3 1639 aa19.81■□□□□ 0.76
PRAMEF31P-201ENST00000504262 RIMBP3Q9UFD9 1639 aa19.81■□□□□ 0.76
PRAMEF31P-201ENST00000504262 BIVM-ERCC5R4GMW8 1640 aa19.81■□□□□ 0.76
PRAMEF31P-201ENST00000504262 TRIM41Q8WV44 630 aa19.81■□□□□ 0.76
PRAMEF31P-201ENST00000504262 SNAPC4Q5SXM2 1469 aa19.79■□□□□ 0.76
PRAMEF31P-201ENST00000504262 SYNJ1O43426 1573 aa19.79■□□□□ 0.76
PRAMEF31P-201ENST00000504262 TOP2BQ02880 1626 aa19.77■□□□□ 0.76
PRAMEF31P-201ENST00000504262 ABCA5Q8WWZ7 1642 aa19.76■□□□□ 0.75
PRAMEF31P-201ENST00000504262 ABCA10Q8WWZ4 1543 aa19.73■□□□□ 0.75
PRAMEF31P-201ENST00000504262 GRIN2BQ13224 1484 aa19.73■□□□□ 0.75
PRAMEF31P-201ENST00000504262 FBLN2P98095 1184 aa19.72■□□□□ 0.75
PRAMEF31P-201ENST00000504262 ARHGEF11O15085 1522 aa19.72■□□□□ 0.75
PRAMEF31P-201ENST00000504262 WRNQ14191 1432 aaPredicted RBP eCLIP19.71■□□□□ 0.75
PRAMEF31P-201ENST00000504262 MAGI1Q96QZ7 1491 aaPredicted RBP19.71■□□□□ 0.75
PRAMEF31P-201ENST00000504262 GAPVD1Q14C86 1478 aa19.7■□□□□ 0.74
PRAMEF31P-201ENST00000504262 SYNJ2O15056 1496 aa19.64■□□□□ 0.73
PRAMEF31P-201ENST00000504262 CLASP1Q7Z460 1538 aa19.63■□□□□ 0.73
PRAMEF31P-201ENST00000504262 CHMP7Q8WUX9 453 aaPredicted RBP19.59■□□□□ 0.73
PRAMEF31P-201ENST00000504262 ADAMTS12P58397 1594 aa19.58■□□□□ 0.73
PRAMEF31P-201ENST00000504262 ARAP1Q96P48 1450 aa19.55■□□□□ 0.72
PRAMEF31P-201ENST00000504262 GRIN2AQ12879 1464 aa19.49■□□□□ 0.71
PRAMEF31P-201ENST00000504262 ERICH3Q5RHP9 1530 aa19.49■□□□□ 0.71
PRAMEF31P-201ENST00000504262 CEP170Q5SW79 1584 aa19.48■□□□□ 0.71
PRAMEF31P-201ENST00000504262 CYB5RLQ6IPT4 315 aa19.47■□□□□ 0.71
PRAMEF31P-201ENST00000504262 FHAD1B1AJZ9 1412 aa19.43■□□□□ 0.7
PRAMEF31P-201ENST00000504262 NUP160Q12769 1436 aa19.4■□□□□ 0.7
PRAMEF31P-201ENST00000504262 ERCC6L2Q5T890 1561 aa19.4■□□□□ 0.7
PRAMEF31P-201ENST00000504262 SHROOM2Q13796 1616 aa19.37■□□□□ 0.69
PRAMEF31P-201ENST00000504262 CUL7Q14999 1698 aa19.33■□□□□ 0.68
PRAMEF31P-201ENST00000504262 RUSC2Q8N2Y8 1516 aa19.32■□□□□ 0.68
PRAMEF31P-201ENST00000504262 KIF27Q86VH2 1401 aa19.3■□□□□ 0.68
PRAMEF31P-201ENST00000504262 IGF1RP08069 1367 aa19.24■□□□□ 0.67
PRAMEF31P-201ENST00000504262 PRG4Q92954 1404 aaPredicted RBP19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms