RNA–Protein interactions for RNA: ENST00000504177.5

RAD17-209, Transcript of RAD17 checkpoint clamp loader component, humanhuman

TSL 3

Gene RAD17, Length 750 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAD17-209ENST00000504177 NISCHQ9Y2I1 1504 aa38.4■■■■□ 3.74
RAD17-209ENST00000504177 CCDC180Q9P1Z9 1646 aa34.7■■■■□ 3.14
RAD17-209ENST00000504177 ABCC9O60706 1549 aa34.62■■■■□ 3.13
RAD17-209ENST00000504177 RB1CC1Q8TDY2 1594 aa32.94■■■□□ 2.86
RAD17-209ENST00000504177 NACADO15069 1562 aa32.66■■■□□ 2.82
RAD17-209ENST00000504177 UNC13AQ9UPW8 1703 aa32.49■■■□□ 2.79
RAD17-209ENST00000504177 DNAJC5BQ9UF47 199 aa32.46■■■□□ 2.79
RAD17-209ENST00000504177 MYO15BQ96JP2 1530 aa32.16■■■□□ 2.74
RAD17-209ENST00000504177 DCAF8L2P0C7V8 631 aa32.14■■■□□ 2.74
RAD17-209ENST00000504177 BICRAQ9NZM4 1560 aa32.09■■■□□ 2.73
RAD17-209ENST00000504177 PABPN1Q86U42 306 aaKnown RBP eCLIP32.06■■■□□ 2.72
RAD17-209ENST00000504177 ZCCHC6Q5VYS8 1495 aaKnown RBP31.88■■■□□ 2.69
RAD17-209ENST00000504177 DCAF1Q9Y4B6 1507 aa31.72■■■□□ 2.67
RAD17-209ENST00000504177 SCRIBQ14160 1630 aa31.57■■■□□ 2.64
RAD17-209ENST00000504177 SHROOM4Q9ULL8 1493 aa31.52■■■□□ 2.64
RAD17-209ENST00000504177 CC2D2AQ9P2K1 1620 aa31.37■■■□□ 2.61
RAD17-209ENST00000504177 EIF4G1Q04637 1599 aaKnown RBP31.26■■■□□ 2.59
RAD17-209ENST00000504177 CECR2Q9BXF3 1484 aa31.17■■■□□ 2.58
RAD17-209ENST00000504177 SMARCA4P51532 1647 aa30.1■■■□□ 2.41
RAD17-209ENST00000504177 NCAPD3P42695 1498 aa30.06■■■□□ 2.4
RAD17-209ENST00000504177 ATAD2BQ9ULI0 1458 aa30.01■■■□□ 2.4
RAD17-209ENST00000504177 HMGXB3Q12766 1538 aa29.98■■■□□ 2.39
RAD17-209ENST00000504177 SMARCA2P51531 1590 aa29.95■■■□□ 2.39
RAD17-209ENST00000504177 CUX2O14529 1486 aa29.87■■■□□ 2.37
RAD17-209ENST00000504177 ERCC6Q03468 1493 aa29.85■■■□□ 2.37
RAD17-209ENST00000504177 BAZ1AQ9NRL2 1556 aaPredicted RBP29.83■■■□□ 2.37
RAD17-209ENST00000504177 DNAJC5Q9H3Z4 198 aa29.8■■■□□ 2.36
RAD17-209ENST00000504177 PEG3Q9GZU2 1588 aa29.77■■■□□ 2.36
RAD17-209ENST00000504177 NESP48681 1621 aa29.75■■■□□ 2.35
RAD17-209ENST00000504177 BAZ1BQ9UIG0 1483 aaKnown RBP29.73■■■□□ 2.35
RAD17-209ENST00000504177 MROH2BQ7Z745 1585 aa29.63■■■□□ 2.33
RAD17-209ENST00000504177 THOC2Q8NI27 1593 aaKnown RBP29.63■■■□□ 2.33
RAD17-209ENST00000504177 KIF21AQ7Z4S6 1674 aa29.55■■■□□ 2.32
RAD17-209ENST00000504177 LAMC3Q9Y6N6 1575 aa29.53■■■□□ 2.32
RAD17-209ENST00000504177 WIZO95785 1651 aa29.35■■■□□ 2.29
RAD17-209ENST00000504177 PDS5BQ9NTI5 1447 aa29.19■■■□□ 2.26
RAD17-209ENST00000504177 CADPSQ9ULU8 1353 aa29.1■■■□□ 2.25
RAD17-209ENST00000504177 WDR62O43379 1518 aa29.1■■■□□ 2.25
RAD17-209ENST00000504177 MRC2Q9UBG0 1479 aa29.08■■■□□ 2.25
RAD17-209ENST00000504177 CEP164Q9UPV0 1460 aa28.94■■■□□ 2.22
RAD17-209ENST00000504177 TOP2AP11388 1531 aaKnown RBP28.92■■■□□ 2.22
RAD17-209ENST00000504177 PRDM2Q13029 1718 aa28.88■■■□□ 2.21
RAD17-209ENST00000504177 FANCD2Q9BXW9 1451 aa28.87■■■□□ 2.21
RAD17-209ENST00000504177 RSF1Q96T23 1441 aaPredicted RBP28.86■■■□□ 2.21
RAD17-209ENST00000504177 CFTRP13569 1480 aa28.83■■■□□ 2.21
RAD17-209ENST00000504177 URB2Q14146 1524 aaKnown RBP28.71■■■□□ 2.19
RAD17-209ENST00000504177 CCDC88BA6NC98 1476 aa28.48■■■□□ 2.15
RAD17-209ENST00000504177 TRIM41Q8WV44 630 aa28.47■■■□□ 2.15
RAD17-209ENST00000504177 ZNF608Q9ULD9 1512 aaPredicted RBP28.36■■■□□ 2.13
RAD17-209ENST00000504177 TOPBP1Q92547 1522 aa28.35■■■□□ 2.13
RAD17-209ENST00000504177 EIF4G3O43432 1585 aaKnown RBP28.33■■■□□ 2.12
RAD17-209ENST00000504177 IFT140Q96RY7 1462 aa28.32■■■□□ 2.12
RAD17-209ENST00000504177 DNMBPQ6XZF7 1577 aa28.29■■■□□ 2.12
RAD17-209ENST00000504177 RIMBP3CA6NJZ7 1639 aa28.27■■■□□ 2.12
RAD17-209ENST00000504177 RIMBP3BA6NNM3 1639 aa28.27■■■□□ 2.12
RAD17-209ENST00000504177 RIMBP3Q9UFD9 1639 aa28.27■■■□□ 2.12
RAD17-209ENST00000504177 OSCARQ8IYS5 282 aa28.25■■■□□ 2.11
RAD17-209ENST00000504177 CHD1O14646 1710 aa28.21■■■□□ 2.11
RAD17-209ENST00000504177 TARBP1Q13395 1621 aaKnown RBP28.2■■■□□ 2.1
RAD17-209ENST00000504177 ABCC8Q09428 1581 aa28.16■■■□□ 2.1
RAD17-209ENST00000504177 ARHGEF11O15085 1522 aa28.09■■■□□ 2.09
RAD17-209ENST00000504177 POLA1P09884 1462 aaPredicted RBP28.06■■■□□ 2.08
RAD17-209ENST00000504177 AQRO60306 1485 aaKnown RBP eCLIP27.99■■■□□ 2.07
RAD17-209ENST00000504177 RAD54L2Q9Y4B4 1467 aa27.92■■■□□ 2.06
RAD17-209ENST00000504177 WDR97A6NE52 1622 aa27.91■■■□□ 2.06
RAD17-209ENST00000504177 FGD5Q6ZNL6 1462 aa27.87■■■□□ 2.05
RAD17-209ENST00000504177 CUX1P39880 1505 aa27.86■■■□□ 2.05
RAD17-209ENST00000504177 ARAP1Q96P48 1450 aa27.82■■■□□ 2.04
RAD17-209ENST00000504177 SNAPC4Q5SXM2 1469 aa27.8■■■□□ 2.04
RAD17-209ENST00000504177 PBRM1Q86U86 1689 aa27.79■■■□□ 2.04
RAD17-209ENST00000504177 SOGA1O94964 1423 aa27.78■■■□□ 2.04
RAD17-209ENST00000504177 CLASP1Q7Z460 1538 aa27.77■■■□□ 2.04
RAD17-209ENST00000504177 TDRD9Q8NDG6 1382 aaKnown RBP27.74■■■□□ 2.03
RAD17-209ENST00000504177 MAGI1Q96QZ7 1491 aaPredicted RBP27.68■■■□□ 2.02
RAD17-209ENST00000504177 FBLN2P98095 1184 aa27.67■■■□□ 2.02
RAD17-209ENST00000504177 SYNJ1O43426 1573 aa27.67■■■□□ 2.02
RAD17-209ENST00000504177 ABCA5Q8WWZ7 1642 aa27.65■■■□□ 2.02
RAD17-209ENST00000504177 CYB5RLQ6IPT4 315 aa27.64■■■□□ 2.02
RAD17-209ENST00000504177 GRIN2BQ13224 1484 aa27.63■■■□□ 2.01
RAD17-209ENST00000504177 SYNJ2O15056 1496 aa27.57■■■□□ 2
RAD17-209ENST00000504177 ABCA10Q8WWZ4 1543 aa27.52■■■□□ 2
RAD17-209ENST00000504177 GAPVD1Q14C86 1478 aa27.51■■■□□ 2
RAD17-209ENST00000504177 BIVM-ERCC5R4GMW8 1640 aa27.49■■□□□ 1.99
RAD17-209ENST00000504177 CHMP7Q8WUX9 453 aaPredicted RBP27.44■■□□□ 1.98
RAD17-209ENST00000504177 ADAMTS12P58397 1594 aa27.43■■□□□ 1.98
RAD17-209ENST00000504177 TOP2BQ02880 1626 aa27.4■■□□□ 1.98
RAD17-209ENST00000504177 CEP170Q5SW79 1584 aa27.35■■□□□ 1.97
RAD17-209ENST00000504177 TRHP20396 242 aaPredicted RBP27.34■■□□□ 1.97
RAD17-209ENST00000504177 ERCC6L2Q5T890 1561 aa27.34■■□□□ 1.97
RAD17-209ENST00000504177 GRIN2AQ12879 1464 aa27.33■■□□□ 1.97
RAD17-209ENST00000504177 SUPT5HO00267 1087 aaKnown RBP27.33■■□□□ 1.97
RAD17-209ENST00000504177 SHROOM2Q13796 1616 aa27.27■■□□□ 1.96
RAD17-209ENST00000504177 WRNQ14191 1432 aaPredicted RBP eCLIP27.26■■□□□ 1.95
RAD17-209ENST00000504177 NUP160Q12769 1436 aa27.23■■□□□ 1.95
RAD17-209ENST00000504177 ERICH3Q5RHP9 1530 aa27.18■■□□□ 1.94
RAD17-209ENST00000504177 FHAD1B1AJZ9 1412 aa27.14■■□□□ 1.93
RAD17-209ENST00000504177 RUSC2Q8N2Y8 1516 aa27.08■■□□□ 1.93
RAD17-209ENST00000504177 KIF13AQ9H1H9 1805 aa27.04■■□□□ 1.92
RAD17-209ENST00000504177 PRG4Q92954 1404 aaPredicted RBP26.9■■□□□ 1.9
RAD17-209ENST00000504177 CUL7Q14999 1698 aa26.86■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms