RNA–Protein interactions for RNA: ENST00000504014.1

PGAM1P1-201, Transcript of phosphoglycerate mutase 1 pseudogene 1, humanhuman

BASIC

Gene PGAM1P1, Length 556 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGAM1P1-201ENST00000504014 NISCHQ9Y2I1 1504 aa22.63■■□□□ 1.21
PGAM1P1-201ENST00000504014 CCDC180Q9P1Z9 1646 aa20.11■□□□□ 0.81
PGAM1P1-201ENST00000504014 ABCC9O60706 1549 aa19.75■□□□□ 0.75
PGAM1P1-201ENST00000504014 DCAF8L2P0C7V8 631 aa19.08■□□□□ 0.64
PGAM1P1-201ENST00000504014 RB1CC1Q8TDY2 1594 aa18.97■□□□□ 0.63
PGAM1P1-201ENST00000504014 NACADO15069 1562 aa18.92■□□□□ 0.62
PGAM1P1-201ENST00000504014 ZCCHC6Q5VYS8 1495 aaKnown RBP18.85■□□□□ 0.61
PGAM1P1-201ENST00000504014 MYO15BQ96JP2 1530 aa18.74■□□□□ 0.59
PGAM1P1-201ENST00000504014 DCAF1Q9Y4B6 1507 aa18.69■□□□□ 0.58
PGAM1P1-201ENST00000504014 PABPN1Q86U42 306 aaKnown RBP eCLIP18.47■□□□□ 0.55
PGAM1P1-201ENST00000504014 UNC13AQ9UPW8 1703 aa18.46■□□□□ 0.55
PGAM1P1-201ENST00000504014 SCRIBQ14160 1630 aa18.43■□□□□ 0.54
PGAM1P1-201ENST00000504014 BICRAQ9NZM4 1560 aa18.31■□□□□ 0.52
PGAM1P1-201ENST00000504014 SHROOM4Q9ULL8 1493 aa18.15■□□□□ 0.5
PGAM1P1-201ENST00000504014 DNAJC5BQ9UF47 199 aa18.02■□□□□ 0.48
PGAM1P1-201ENST00000504014 EIF4G1Q04637 1599 aaKnown RBP17.89■□□□□ 0.45
PGAM1P1-201ENST00000504014 CC2D2AQ9P2K1 1620 aa17.82■□□□□ 0.44
PGAM1P1-201ENST00000504014 CECR2Q9BXF3 1484 aa17.73■□□□□ 0.43
PGAM1P1-201ENST00000504014 SMARCA4P51532 1647 aa17.58■□□□□ 0.4
PGAM1P1-201ENST00000504014 BAZ1AQ9NRL2 1556 aaPredicted RBP17.57■□□□□ 0.4
PGAM1P1-201ENST00000504014 SMARCA2P51531 1590 aa17.48■□□□□ 0.39
PGAM1P1-201ENST00000504014 ATAD2BQ9ULI0 1458 aa17.47■□□□□ 0.39
PGAM1P1-201ENST00000504014 MROH2BQ7Z745 1585 aa17.45■□□□□ 0.38
PGAM1P1-201ENST00000504014 NCAPD3P42695 1498 aa17.44■□□□□ 0.38
PGAM1P1-201ENST00000504014 BAZ1BQ9UIG0 1483 aaKnown RBP17.38■□□□□ 0.37
PGAM1P1-201ENST00000504014 HMGXB3Q12766 1538 aa17.37■□□□□ 0.37
PGAM1P1-201ENST00000504014 PEG3Q9GZU2 1588 aa17.34■□□□□ 0.37
PGAM1P1-201ENST00000504014 WIZO95785 1651 aa17.26■□□□□ 0.35
PGAM1P1-201ENST00000504014 RSF1Q96T23 1441 aaPredicted RBP17.25■□□□□ 0.35
PGAM1P1-201ENST00000504014 TOP2AP11388 1531 aaKnown RBP17.1■□□□□ 0.33
PGAM1P1-201ENST00000504014 ERCC6Q03468 1493 aa17.07■□□□□ 0.32
PGAM1P1-201ENST00000504014 NESP48681 1621 aa17.05■□□□□ 0.32
PGAM1P1-201ENST00000504014 LAMC3Q9Y6N6 1575 aa17.01■□□□□ 0.31
PGAM1P1-201ENST00000504014 CADPSQ9ULU8 1353 aa16.97■□□□□ 0.31
PGAM1P1-201ENST00000504014 SUPT5HO00267 1087 aaKnown RBP16.95■□□□□ 0.3
PGAM1P1-201ENST00000504014 PDS5BQ9NTI5 1447 aa16.93■□□□□ 0.3
PGAM1P1-201ENST00000504014 CCDC88BA6NC98 1476 aa16.88■□□□□ 0.29
PGAM1P1-201ENST00000504014 CFTRP13569 1480 aa16.85■□□□□ 0.29
PGAM1P1-201ENST00000504014 KIF21AQ7Z4S6 1674 aa16.84■□□□□ 0.29
PGAM1P1-201ENST00000504014 CUX2O14529 1486 aa16.8■□□□□ 0.28
PGAM1P1-201ENST00000504014 FANCD2Q9BXW9 1451 aa16.8■□□□□ 0.28
PGAM1P1-201ENST00000504014 CEP164Q9UPV0 1460 aa16.8■□□□□ 0.28
PGAM1P1-201ENST00000504014 THOC2Q8NI27 1593 aaKnown RBP16.77■□□□□ 0.27
PGAM1P1-201ENST00000504014 MRC2Q9UBG0 1479 aa16.75■□□□□ 0.27
PGAM1P1-201ENST00000504014 PRDM2Q13029 1718 aa16.7■□□□□ 0.26
PGAM1P1-201ENST00000504014 WDR62O43379 1518 aa16.65■□□□□ 0.26
PGAM1P1-201ENST00000504014 URB2Q14146 1524 aaKnown RBP16.59■□□□□ 0.25
PGAM1P1-201ENST00000504014 ABCC8Q09428 1581 aa16.51■□□□□ 0.23
PGAM1P1-201ENST00000504014 TOPBP1Q92547 1522 aa16.5■□□□□ 0.23
PGAM1P1-201ENST00000504014 DNMBPQ6XZF7 1577 aa16.5■□□□□ 0.23
PGAM1P1-201ENST00000504014 IFT140Q96RY7 1462 aa16.42■□□□□ 0.22
PGAM1P1-201ENST00000504014 CUX1P39880 1505 aa16.37■□□□□ 0.21
PGAM1P1-201ENST00000504014 POLA1P09884 1462 aaPredicted RBP16.36■□□□□ 0.21
PGAM1P1-201ENST00000504014 FGD5Q6ZNL6 1462 aa16.35■□□□□ 0.21
PGAM1P1-201ENST00000504014 SOGA1O94964 1423 aa16.32■□□□□ 0.2
PGAM1P1-201ENST00000504014 WRNQ14191 1432 aaPredicted RBP eCLIP16.32■□□□□ 0.2
PGAM1P1-201ENST00000504014 ZNF608Q9ULD9 1512 aaPredicted RBP16.32■□□□□ 0.2
PGAM1P1-201ENST00000504014 RAD54L2Q9Y4B4 1467 aa16.31■□□□□ 0.2
PGAM1P1-201ENST00000504014 TARBP1Q13395 1621 aaKnown RBP16.29■□□□□ 0.2
PGAM1P1-201ENST00000504014 EIF4G3O43432 1585 aaKnown RBP16.27■□□□□ 0.2
PGAM1P1-201ENST00000504014 AQRO60306 1485 aaKnown RBP eCLIP16.25■□□□□ 0.19
PGAM1P1-201ENST00000504014 DNAJC5Q9H3Z4 198 aa16.25■□□□□ 0.19
PGAM1P1-201ENST00000504014 SYNJ1O43426 1573 aa16.24■□□□□ 0.19
PGAM1P1-201ENST00000504014 TDRD9Q8NDG6 1382 aaKnown RBP16.24■□□□□ 0.19
PGAM1P1-201ENST00000504014 TOP2BQ02880 1626 aa16.23■□□□□ 0.19
PGAM1P1-201ENST00000504014 BIVM-ERCC5R4GMW8 1640 aa16.22■□□□□ 0.19
PGAM1P1-201ENST00000504014 WDR97A6NE52 1622 aa16.17■□□□□ 0.18
PGAM1P1-201ENST00000504014 ABCA10Q8WWZ4 1543 aa16.16■□□□□ 0.18
PGAM1P1-201ENST00000504014 FBLN2P98095 1184 aa16.16■□□□□ 0.18
PGAM1P1-201ENST00000504014 OSCARQ8IYS5 282 aa16.14■□□□□ 0.17
PGAM1P1-201ENST00000504014 GAPVD1Q14C86 1478 aa16.14■□□□□ 0.17
PGAM1P1-201ENST00000504014 GRIN2BQ13224 1484 aa16.13■□□□□ 0.17
PGAM1P1-201ENST00000504014 SNAPC4Q5SXM2 1469 aa16.12■□□□□ 0.17
PGAM1P1-201ENST00000504014 ABCA5Q8WWZ7 1642 aa16.08■□□□□ 0.17
PGAM1P1-201ENST00000504014 CHMP7Q8WUX9 453 aaPredicted RBP16.08■□□□□ 0.16
PGAM1P1-201ENST00000504014 MAGI1Q96QZ7 1491 aaPredicted RBP16.08■□□□□ 0.16
PGAM1P1-201ENST00000504014 PBRM1Q86U86 1689 aa16.08■□□□□ 0.16
PGAM1P1-201ENST00000504014 CHD1O14646 1710 aa16.05■□□□□ 0.16
PGAM1P1-201ENST00000504014 SYNJ2O15056 1496 aa16.02■□□□□ 0.15
PGAM1P1-201ENST00000504014 TRIM41Q8WV44 630 aa16■□□□□ 0.15
PGAM1P1-201ENST00000504014 KIF27Q86VH2 1401 aa15.99■□□□□ 0.15
PGAM1P1-201ENST00000504014 ERICH3Q5RHP9 1530 aa15.97■□□□□ 0.15
PGAM1P1-201ENST00000504014 ADAMTS12P58397 1594 aa15.96■□□□□ 0.15
PGAM1P1-201ENST00000504014 FHAD1B1AJZ9 1412 aa15.94■□□□□ 0.14
PGAM1P1-201ENST00000504014 GRIN2AQ12879 1464 aa15.91■□□□□ 0.14
PGAM1P1-201ENST00000504014 CLASP1Q7Z460 1538 aa15.86■□□□□ 0.13
PGAM1P1-201ENST00000504014 IGF1RP08069 1367 aa15.86■□□□□ 0.13
PGAM1P1-201ENST00000504014 ARHGEF11O15085 1522 aa15.85■□□□□ 0.13
PGAM1P1-201ENST00000504014 CUL7Q14999 1698 aa15.85■□□□□ 0.13
PGAM1P1-201ENST00000504014 RIMBP3CA6NJZ7 1639 aa15.84■□□□□ 0.13
PGAM1P1-201ENST00000504014 RIMBP3BA6NNM3 1639 aa15.84■□□□□ 0.13
PGAM1P1-201ENST00000504014 RIMBP3Q9UFD9 1639 aa15.84■□□□□ 0.13
PGAM1P1-201ENST00000504014 CEP170Q5SW79 1584 aa15.82■□□□□ 0.12
PGAM1P1-201ENST00000504014 NUP160Q12769 1436 aa15.81■□□□□ 0.12
PGAM1P1-201ENST00000504014 CARMIL1Q5VZK9 1371 aa15.81■□□□□ 0.12
PGAM1P1-201ENST00000504014 RUSC2Q8N2Y8 1516 aa15.79■□□□□ 0.12
PGAM1P1-201ENST00000504014 CYB5RLQ6IPT4 315 aa15.76■□□□□ 0.11
PGAM1P1-201ENST00000504014 CHIC1Q5VXU3 224 aa15.74■□□□□ 0.11
PGAM1P1-201ENST00000504014 ARAP1Q96P48 1450 aa15.71■□□□□ 0.11
PGAM1P1-201ENST00000504014 RAPGEF2Q9Y4G8 1499 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms