RNA–Protein interactions for RNA: ENST00000503940.5

C5orf38-204, Transcript of chromosome 5 open reading frame 38, humanhuman

TSL 1 (best)

Gene C5orf38, Length 451 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C5orf38-204ENST00000503940 NISCHQ9Y2I1 1504 aa46.91■■■■■ 5.1
C5orf38-204ENST00000503940 CCDC180Q9P1Z9 1646 aa41.89■■■■■ 4.3
C5orf38-204ENST00000503940 ABCC9O60706 1549 aa41.83■■■■■ 4.29
C5orf38-204ENST00000503940 RB1CC1Q8TDY2 1594 aa39.84■■■■□ 3.97
C5orf38-204ENST00000503940 DCAF8L2P0C7V8 631 aa39.7■■■■□ 3.95
C5orf38-204ENST00000503940 NACADO15069 1562 aa39.63■■■■□ 3.94
C5orf38-204ENST00000503940 MYO15BQ96JP2 1530 aa39.14■■■■□ 3.86
C5orf38-204ENST00000503940 DNAJC5BQ9UF47 199 aa39.14■■■■□ 3.86
C5orf38-204ENST00000503940 PABPN1Q86U42 306 aaKnown RBP eCLIP39.07■■■■□ 3.85
C5orf38-204ENST00000503940 UNC13AQ9UPW8 1703 aa38.89■■■■□ 3.82
C5orf38-204ENST00000503940 ZCCHC6Q5VYS8 1495 aaKnown RBP38.88■■■■□ 3.81
C5orf38-204ENST00000503940 DCAF1Q9Y4B6 1507 aa38.73■■■■□ 3.79
C5orf38-204ENST00000503940 BICRAQ9NZM4 1560 aa38.67■■■■□ 3.78
C5orf38-204ENST00000503940 SCRIBQ14160 1630 aa38.26■■■■□ 3.71
C5orf38-204ENST00000503940 SHROOM4Q9ULL8 1493 aa38.14■■■■□ 3.7
C5orf38-204ENST00000503940 CC2D2AQ9P2K1 1620 aa37.75■■■■□ 3.63
C5orf38-204ENST00000503940 EIF4G1Q04637 1599 aaKnown RBP37.72■■■■□ 3.63
C5orf38-204ENST00000503940 CECR2Q9BXF3 1484 aa37.64■■■■□ 3.62
C5orf38-204ENST00000503940 NCAPD3P42695 1498 aa36.63■■■■□ 3.45
C5orf38-204ENST00000503940 ATAD2BQ9ULI0 1458 aa36.55■■■■□ 3.44
C5orf38-204ENST00000503940 SMARCA4P51532 1647 aa36.5■■■■□ 3.43
C5orf38-204ENST00000503940 SMARCA2P51531 1590 aa36.42■■■■□ 3.42
C5orf38-204ENST00000503940 BAZ1AQ9NRL2 1556 aaPredicted RBP36.38■■■■□ 3.41
C5orf38-204ENST00000503940 HMGXB3Q12766 1538 aa36.3■■■■□ 3.4
C5orf38-204ENST00000503940 BAZ1BQ9UIG0 1483 aaKnown RBP36.19■■■■□ 3.38
C5orf38-204ENST00000503940 MROH2BQ7Z745 1585 aa36.15■■■■□ 3.38
C5orf38-204ENST00000503940 PEG3Q9GZU2 1588 aa36.14■■■■□ 3.38
C5orf38-204ENST00000503940 ERCC6Q03468 1493 aa36.09■■■■□ 3.37
C5orf38-204ENST00000503940 NESP48681 1621 aa35.98■■■■□ 3.35
C5orf38-204ENST00000503940 CUX2O14529 1486 aa35.92■■■■□ 3.34
C5orf38-204ENST00000503940 DNAJC5Q9H3Z4 198 aa35.77■■■■□ 3.32
C5orf38-204ENST00000503940 LAMC3Q9Y6N6 1575 aa35.72■■■■□ 3.31
C5orf38-204ENST00000503940 WIZO95785 1651 aa35.71■■■■□ 3.31
C5orf38-204ENST00000503940 PDS5BQ9NTI5 1447 aa35.58■■■■□ 3.29
C5orf38-204ENST00000503940 CADPSQ9ULU8 1353 aa35.57■■■■□ 3.28
C5orf38-204ENST00000503940 RSF1Q96T23 1441 aaPredicted RBP35.52■■■■□ 3.28
C5orf38-204ENST00000503940 THOC2Q8NI27 1593 aaKnown RBP35.48■■■■□ 3.27
C5orf38-204ENST00000503940 KIF21AQ7Z4S6 1674 aa35.44■■■■□ 3.26
C5orf38-204ENST00000503940 TOP2AP11388 1531 aaKnown RBP35.26■■■■□ 3.23
C5orf38-204ENST00000503940 MRC2Q9UBG0 1479 aa35.21■■■■□ 3.23
C5orf38-204ENST00000503940 CFTRP13569 1480 aa35.16■■■■□ 3.22
C5orf38-204ENST00000503940 FANCD2Q9BXW9 1451 aa35.12■■■■□ 3.21
C5orf38-204ENST00000503940 CEP164Q9UPV0 1460 aa35.12■■■■□ 3.21
C5orf38-204ENST00000503940 WDR62O43379 1518 aa35.08■■■■□ 3.21
C5orf38-204ENST00000503940 CCDC88BA6NC98 1476 aa34.93■■■■□ 3.18
C5orf38-204ENST00000503940 URB2Q14146 1524 aaKnown RBP34.8■■■■□ 3.16
C5orf38-204ENST00000503940 PRDM2Q13029 1718 aa34.69■■■■□ 3.14
C5orf38-204ENST00000503940 TOPBP1Q92547 1522 aa34.47■■■■□ 3.11
C5orf38-204ENST00000503940 OSCARQ8IYS5 282 aa34.46■■■■□ 3.11
C5orf38-204ENST00000503940 IFT140Q96RY7 1462 aa34.43■■■■□ 3.1
C5orf38-204ENST00000503940 ABCC8Q09428 1581 aa34.43■■■■□ 3.1
C5orf38-204ENST00000503940 ZNF608Q9ULD9 1512 aaPredicted RBP34.35■■■■□ 3.09
C5orf38-204ENST00000503940 DNMBPQ6XZF7 1577 aa34.32■■■■□ 3.09
C5orf38-204ENST00000503940 TRIM41Q8WV44 630 aa34.32■■■■□ 3.08
C5orf38-204ENST00000503940 SUPT5HO00267 1087 aaKnown RBP34.23■■■■□ 3.07
C5orf38-204ENST00000503940 POLA1P09884 1462 aaPredicted RBP34.13■■■■□ 3.05
C5orf38-204ENST00000503940 AQRO60306 1485 aaKnown RBP eCLIP34.12■■■■□ 3.05
C5orf38-204ENST00000503940 TARBP1Q13395 1621 aaKnown RBP34.11■■■■□ 3.05
C5orf38-204ENST00000503940 EIF4G3O43432 1585 aaKnown RBP34.1■■■■□ 3.05
C5orf38-204ENST00000503940 SOGA1O94964 1423 aa34.04■■■■□ 3.04
C5orf38-204ENST00000503940 RAD54L2Q9Y4B4 1467 aa34.04■■■■□ 3.04
C5orf38-204ENST00000503940 TDRD9Q8NDG6 1382 aaKnown RBP33.96■■■■□ 3.03
C5orf38-204ENST00000503940 FGD5Q6ZNL6 1462 aa33.95■■■■□ 3.02
C5orf38-204ENST00000503940 CUX1P39880 1505 aa33.94■■■■□ 3.02
C5orf38-204ENST00000503940 FBLN2P98095 1184 aa33.92■■■■□ 3.02
C5orf38-204ENST00000503940 RIMBP3CA6NJZ7 1639 aa33.83■■■■□ 3.01
C5orf38-204ENST00000503940 RIMBP3BA6NNM3 1639 aa33.83■■■■□ 3.01
C5orf38-204ENST00000503940 RIMBP3Q9UFD9 1639 aa33.83■■■■□ 3.01
C5orf38-204ENST00000503940 CHD1O14646 1710 aa33.8■■■■□ 3
C5orf38-204ENST00000503940 ARHGEF11O15085 1522 aa33.77■■■■□ 3
C5orf38-204ENST00000503940 WDR97A6NE52 1622 aa33.74■■■□□ 2.99
C5orf38-204ENST00000503940 SNAPC4Q5SXM2 1469 aa33.72■■■□□ 2.99
C5orf38-204ENST00000503940 CHMP7Q8WUX9 453 aaPredicted RBP33.7■■■□□ 2.99
C5orf38-204ENST00000503940 GRIN2BQ13224 1484 aa33.68■■■□□ 2.98
C5orf38-204ENST00000503940 CYB5RLQ6IPT4 315 aa33.65■■■□□ 2.98
C5orf38-204ENST00000503940 MAGI1Q96QZ7 1491 aaPredicted RBP33.63■■■□□ 2.97
C5orf38-204ENST00000503940 GAPVD1Q14C86 1478 aa33.6■■■□□ 2.97
C5orf38-204ENST00000503940 ABCA10Q8WWZ4 1543 aa33.58■■■□□ 2.97
C5orf38-204ENST00000503940 SYNJ2O15056 1496 aa33.52■■■□□ 2.96
C5orf38-204ENST00000503940 WRNQ14191 1432 aaPredicted RBP eCLIP33.52■■■□□ 2.96
C5orf38-204ENST00000503940 PBRM1Q86U86 1689 aa33.46■■■□□ 2.95
C5orf38-204ENST00000503940 SYNJ1O43426 1573 aa33.46■■■□□ 2.95
C5orf38-204ENST00000503940 ARAP1Q96P48 1450 aa33.45■■■□□ 2.95
C5orf38-204ENST00000503940 CLASP1Q7Z460 1538 aa33.44■■■□□ 2.94
C5orf38-204ENST00000503940 ABCA5Q8WWZ7 1642 aa33.44■■■□□ 2.94
C5orf38-204ENST00000503940 TOP2BQ02880 1626 aa33.43■■■□□ 2.94
C5orf38-204ENST00000503940 BIVM-ERCC5R4GMW8 1640 aa33.4■■■□□ 2.94
C5orf38-204ENST00000503940 GRIN2AQ12879 1464 aa33.22■■■□□ 2.91
C5orf38-204ENST00000503940 TRHP20396 242 aaPredicted RBP33.2■■■□□ 2.91
C5orf38-204ENST00000503940 FHAD1B1AJZ9 1412 aa33.19■■■□□ 2.9
C5orf38-204ENST00000503940 ADAMTS12P58397 1594 aa33.17■■■□□ 2.9
C5orf38-204ENST00000503940 ERICH3Q5RHP9 1530 aa33.14■■■□□ 2.9
C5orf38-204ENST00000503940 NUP160Q12769 1436 aa33.11■■■□□ 2.89
C5orf38-204ENST00000503940 CEP170Q5SW79 1584 aa33.07■■■□□ 2.88
C5orf38-204ENST00000503940 ERCC6L2Q5T890 1561 aa32.97■■■□□ 2.87
C5orf38-204ENST00000503940 JPH4Q96JJ6 628 aa32.9■■■□□ 2.86
C5orf38-204ENST00000503940 SHROOM2Q13796 1616 aa32.88■■■□□ 2.85
C5orf38-204ENST00000503940 IGF1RP08069 1367 aa32.87■■■□□ 2.85
C5orf38-204ENST00000503940 KIF27Q86VH2 1401 aa32.86■■■□□ 2.85
C5orf38-204ENST00000503940 PRG4Q92954 1404 aaPredicted RBP32.82■■■□□ 2.84
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms