RNA–Protein interactions for RNA: ENST00000503629.6

STX4-213, Transcript of syntaxin 4, humanhuman

TSL 4

Gene STX4, Length 1,377 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STX4-213ENST00000503629 NISCHQ9Y2I1 1504 aa38.42■■■■□ 3.74
STX4-213ENST00000503629 ABCC9O60706 1549 aa34.84■■■■□ 3.17
STX4-213ENST00000503629 CCDC180Q9P1Z9 1646 aa34.43■■■■□ 3.1
STX4-213ENST00000503629 DNAJC5BQ9UF47 199 aa33.25■■■□□ 2.91
STX4-213ENST00000503629 RB1CC1Q8TDY2 1594 aa32.95■■■□□ 2.86
STX4-213ENST00000503629 NACADO15069 1562 aa32.72■■■□□ 2.83
STX4-213ENST00000503629 DCAF8L2P0C7V8 631 aa32.52■■■□□ 2.8
STX4-213ENST00000503629 PABPN1Q86U42 306 aaKnown RBP eCLIP32.51■■■□□ 2.79
STX4-213ENST00000503629 MYO15BQ96JP2 1530 aa32.27■■■□□ 2.76
STX4-213ENST00000503629 UNC13AQ9UPW8 1703 aa32.19■■■□□ 2.74
STX4-213ENST00000503629 BICRAQ9NZM4 1560 aa32.17■■■□□ 2.74
STX4-213ENST00000503629 ZCCHC6Q5VYS8 1495 aaKnown RBP31.75■■■□□ 2.67
STX4-213ENST00000503629 DCAF1Q9Y4B6 1507 aa31.72■■■□□ 2.67
STX4-213ENST00000503629 SHROOM4Q9ULL8 1493 aa31.58■■■□□ 2.65
STX4-213ENST00000503629 CC2D2AQ9P2K1 1620 aa31.44■■■□□ 2.62
STX4-213ENST00000503629 CECR2Q9BXF3 1484 aa31.42■■■□□ 2.62
STX4-213ENST00000503629 SCRIBQ14160 1630 aa31.36■■■□□ 2.61
STX4-213ENST00000503629 EIF4G1Q04637 1599 aaKnown RBP31.31■■■□□ 2.6
STX4-213ENST00000503629 DNAJC5Q9H3Z4 198 aa30.66■■■□□ 2.5
STX4-213ENST00000503629 NCAPD3P42695 1498 aa30.35■■■□□ 2.45
STX4-213ENST00000503629 ATAD2BQ9ULI0 1458 aa30.16■■■□□ 2.42
STX4-213ENST00000503629 CUX2O14529 1486 aa30.13■■■□□ 2.41
STX4-213ENST00000503629 ERCC6Q03468 1493 aa29.98■■■□□ 2.39
STX4-213ENST00000503629 SMARCA4P51532 1647 aa29.95■■■□□ 2.38
STX4-213ENST00000503629 HMGXB3Q12766 1538 aa29.94■■■□□ 2.38
STX4-213ENST00000503629 SMARCA2P51531 1590 aa29.93■■■□□ 2.38
STX4-213ENST00000503629 NESP48681 1621 aa29.91■■■□□ 2.38
STX4-213ENST00000503629 BAZ1AQ9NRL2 1556 aaPredicted RBP29.75■■■□□ 2.35
STX4-213ENST00000503629 PEG3Q9GZU2 1588 aa29.73■■■□□ 2.35
STX4-213ENST00000503629 BAZ1BQ9UIG0 1483 aaKnown RBP29.73■■■□□ 2.35
STX4-213ENST00000503629 MROH2BQ7Z745 1585 aa29.62■■■□□ 2.33
STX4-213ENST00000503629 THOC2Q8NI27 1593 aaKnown RBP29.55■■■□□ 2.32
STX4-213ENST00000503629 LAMC3Q9Y6N6 1575 aa29.54■■■□□ 2.32
STX4-213ENST00000503629 PDS5BQ9NTI5 1447 aa29.43■■■□□ 2.3
STX4-213ENST00000503629 CADPSQ9ULU8 1353 aa29.38■■■□□ 2.29
STX4-213ENST00000503629 KIF21AQ7Z4S6 1674 aa29.33■■■□□ 2.29
STX4-213ENST00000503629 MRC2Q9UBG0 1479 aa29.17■■■□□ 2.26
STX4-213ENST00000503629 WIZO95785 1651 aa29.17■■■□□ 2.26
STX4-213ENST00000503629 WDR62O43379 1518 aa29.12■■■□□ 2.25
STX4-213ENST00000503629 TRIM41Q8WV44 630 aa28.99■■■□□ 2.23
STX4-213ENST00000503629 CFTRP13569 1480 aa28.98■■■□□ 2.23
STX4-213ENST00000503629 FANCD2Q9BXW9 1451 aa28.96■■■□□ 2.23
STX4-213ENST00000503629 CEP164Q9UPV0 1460 aa28.95■■■□□ 2.23
STX4-213ENST00000503629 RSF1Q96T23 1441 aaPredicted RBP28.95■■■□□ 2.22
STX4-213ENST00000503629 OSCARQ8IYS5 282 aa28.82■■■□□ 2.2
STX4-213ENST00000503629 URB2Q14146 1524 aaKnown RBP28.79■■■□□ 2.2
STX4-213ENST00000503629 TOP2AP11388 1531 aaKnown RBP28.75■■■□□ 2.19
STX4-213ENST00000503629 CCDC88BA6NC98 1476 aa28.55■■■□□ 2.16
STX4-213ENST00000503629 ZNF608Q9ULD9 1512 aaPredicted RBP28.5■■■□□ 2.15
STX4-213ENST00000503629 IFT140Q96RY7 1462 aa28.44■■■□□ 2.14
STX4-213ENST00000503629 TOPBP1Q92547 1522 aa28.39■■■□□ 2.14
STX4-213ENST00000503629 PRDM2Q13029 1718 aa28.36■■■□□ 2.13
STX4-213ENST00000503629 RIMBP3CA6NJZ7 1639 aa28.33■■■□□ 2.13
STX4-213ENST00000503629 RIMBP3BA6NNM3 1639 aa28.33■■■□□ 2.13
STX4-213ENST00000503629 RIMBP3Q9UFD9 1639 aa28.33■■■□□ 2.13
STX4-213ENST00000503629 SUPT5HO00267 1087 aaKnown RBP28.28■■■□□ 2.12
STX4-213ENST00000503629 ABCC8Q09428 1581 aa28.27■■■□□ 2.12
STX4-213ENST00000503629 ARHGEF11O15085 1522 aa28.25■■■□□ 2.11
STX4-213ENST00000503629 AQRO60306 1485 aaKnown RBP eCLIP28.21■■■□□ 2.11
STX4-213ENST00000503629 DNMBPQ6XZF7 1577 aa28.19■■■□□ 2.1
STX4-213ENST00000503629 TARBP1Q13395 1621 aaKnown RBP28.16■■■□□ 2.1
STX4-213ENST00000503629 EIF4G3O43432 1585 aaKnown RBP28.16■■■□□ 2.1
STX4-213ENST00000503629 CYB5RLQ6IPT4 315 aa28.14■■■□□ 2.1
STX4-213ENST00000503629 POLA1P09884 1462 aaPredicted RBP28.09■■■□□ 2.09
STX4-213ENST00000503629 RAD54L2Q9Y4B4 1467 aa28.03■■■□□ 2.08
STX4-213ENST00000503629 TDRD9Q8NDG6 1382 aaKnown RBP28■■■□□ 2.07
STX4-213ENST00000503629 SOGA1O94964 1423 aa27.99■■■□□ 2.07
STX4-213ENST00000503629 ARAP1Q96P48 1450 aa27.99■■■□□ 2.07
STX4-213ENST00000503629 FBLN2P98095 1184 aa27.99■■■□□ 2.07
STX4-213ENST00000503629 CHD1O14646 1710 aa27.97■■■□□ 2.07
STX4-213ENST00000503629 FGD5Q6ZNL6 1462 aa27.85■■■□□ 2.05
STX4-213ENST00000503629 CUX1P39880 1505 aa27.82■■■□□ 2.04
STX4-213ENST00000503629 SNAPC4Q5SXM2 1469 aa27.81■■■□□ 2.04
STX4-213ENST00000503629 TRHP20396 242 aaPredicted RBP27.81■■■□□ 2.04
STX4-213ENST00000503629 CLASP1Q7Z460 1538 aa27.79■■■□□ 2.04
STX4-213ENST00000503629 CHMP7Q8WUX9 453 aaPredicted RBP27.78■■■□□ 2.04
STX4-213ENST00000503629 WDR97A6NE52 1622 aa27.75■■■□□ 2.03
STX4-213ENST00000503629 MAGI1Q96QZ7 1491 aaPredicted RBP27.73■■■□□ 2.03
STX4-213ENST00000503629 GRIN2BQ13224 1484 aa27.72■■■□□ 2.03
STX4-213ENST00000503629 SYNJ2O15056 1496 aa27.67■■■□□ 2.02
STX4-213ENST00000503629 SYNJ1O43426 1573 aa27.62■■■□□ 2.01
STX4-213ENST00000503629 GAPVD1Q14C86 1478 aa27.6■■■□□ 2.01
STX4-213ENST00000503629 ABCA10Q8WWZ4 1543 aa27.55■■■□□ 2
STX4-213ENST00000503629 ABCA5Q8WWZ7 1642 aa27.47■■□□□ 1.99
STX4-213ENST00000503629 PBRM1Q86U86 1689 aa27.43■■□□□ 1.98
STX4-213ENST00000503629 ERCC6L2Q5T890 1561 aa27.38■■□□□ 1.97
STX4-213ENST00000503629 GRIN2AQ12879 1464 aa27.36■■□□□ 1.97
STX4-213ENST00000503629 NUP160Q12769 1436 aa27.36■■□□□ 1.97
STX4-213ENST00000503629 WRNQ14191 1432 aaPredicted RBP eCLIP27.35■■□□□ 1.97
STX4-213ENST00000503629 CEP170Q5SW79 1584 aa27.28■■□□□ 1.96
STX4-213ENST00000503629 FHAD1B1AJZ9 1412 aa27.25■■□□□ 1.95
STX4-213ENST00000503629 ADAMTS12P58397 1594 aa27.24■■□□□ 1.95
STX4-213ENST00000503629 TOP2BQ02880 1626 aa27.23■■□□□ 1.95
STX4-213ENST00000503629 SHROOM2Q13796 1616 aa27.2■■□□□ 1.94
STX4-213ENST00000503629 BIVM-ERCC5R4GMW8 1640 aa27.2■■□□□ 1.94
STX4-213ENST00000503629 AEBP2Q6ZN18 517 aaPredicted RBP27.15■■□□□ 1.94
STX4-213ENST00000503629 ERICH3Q5RHP9 1530 aa27.15■■□□□ 1.94
STX4-213ENST00000503629 JPH4Q96JJ6 628 aa27.13■■□□□ 1.93
STX4-213ENST00000503629 PRG4Q92954 1404 aaPredicted RBP27.07■■□□□ 1.92
STX4-213ENST00000503629 KIF13AQ9H1H9 1805 aa26.92■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms