RNA–Protein interactions for RNA: ENST00000503620.1

PAPD4-206, Transcript of Poly(A) RNA polymerase GLD2, humanhuman

TSL 3

Gene PAPD4, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAPD4-206ENST00000503620 NISCHQ9Y2I1 1504 aa22.08■■□□□ 1.13
PAPD4-206ENST00000503620 ABCC9O60706 1549 aa21.02■□□□□ 0.96
PAPD4-206ENST00000503620 DNAJC5BQ9UF47 199 aa20.7■□□□□ 0.9
PAPD4-206ENST00000503620 CCDC180Q9P1Z9 1646 aa20.12■□□□□ 0.81
PAPD4-206ENST00000503620 RB1CC1Q8TDY2 1594 aa19.56■□□□□ 0.72
PAPD4-206ENST00000503620 DNAJC5Q9H3Z4 198 aa19.55■□□□□ 0.72
PAPD4-206ENST00000503620 PABPN1Q86U42 306 aaKnown RBP eCLIP19.43■□□□□ 0.7
PAPD4-206ENST00000503620 NACADO15069 1562 aa19.25■□□□□ 0.67
PAPD4-206ENST00000503620 BICRAQ9NZM4 1560 aa19.21■□□□□ 0.67
PAPD4-206ENST00000503620 UNC13AQ9UPW8 1703 aa19.16■□□□□ 0.66
PAPD4-206ENST00000503620 CECR2Q9BXF3 1484 aa19.03■□□□□ 0.64
PAPD4-206ENST00000503620 CC2D2AQ9P2K1 1620 aa18.95■□□□□ 0.62
PAPD4-206ENST00000503620 MYO15BQ96JP2 1530 aa18.79■□□□□ 0.6
PAPD4-206ENST00000503620 DCAF8L2P0C7V8 631 aa18.78■□□□□ 0.6
PAPD4-206ENST00000503620 SHROOM4Q9ULL8 1493 aa18.75■□□□□ 0.59
PAPD4-206ENST00000503620 EIF4G1Q04637 1599 aaKnown RBP18.71■□□□□ 0.59
PAPD4-206ENST00000503620 CUX2O14529 1486 aa18.48■□□□□ 0.55
PAPD4-206ENST00000503620 SCRIBQ14160 1630 aa18.27■□□□□ 0.51
PAPD4-206ENST00000503620 DCAF1Q9Y4B6 1507 aa18.21■□□□□ 0.51
PAPD4-206ENST00000503620 TRIM41Q8WV44 630 aa18.15■□□□□ 0.5
PAPD4-206ENST00000503620 ZCCHC6Q5VYS8 1495 aaKnown RBP18.14■□□□□ 0.49
PAPD4-206ENST00000503620 ERCC6Q03468 1493 aa18.1■□□□□ 0.49
PAPD4-206ENST00000503620 NCAPD3P42695 1498 aa17.88■□□□□ 0.45
PAPD4-206ENST00000503620 NESP48681 1621 aa17.87■□□□□ 0.45
PAPD4-206ENST00000503620 THOC2Q8NI27 1593 aaKnown RBP17.86■□□□□ 0.45
PAPD4-206ENST00000503620 ATAD2BQ9ULI0 1458 aa17.68■□□□□ 0.42
PAPD4-206ENST00000503620 HMGXB3Q12766 1538 aa17.61■□□□□ 0.41
PAPD4-206ENST00000503620 SMARCA2P51531 1590 aa17.57■□□□□ 0.4
PAPD4-206ENST00000503620 KIF21AQ7Z4S6 1674 aa17.51■□□□□ 0.39
PAPD4-206ENST00000503620 LAMC3Q9Y6N6 1575 aa17.5■□□□□ 0.39
PAPD4-206ENST00000503620 BAZ1AQ9NRL2 1556 aaPredicted RBP17.47■□□□□ 0.39
PAPD4-206ENST00000503620 OSCARQ8IYS5 282 aa17.43■□□□□ 0.38
PAPD4-206ENST00000503620 PDS5BQ9NTI5 1447 aa17.41■□□□□ 0.38
PAPD4-206ENST00000503620 WDR62O43379 1518 aa17.4■□□□□ 0.38
PAPD4-206ENST00000503620 SMARCA4P51532 1647 aa17.38■□□□□ 0.37
PAPD4-206ENST00000503620 MRC2Q9UBG0 1479 aa17.36■□□□□ 0.37
PAPD4-206ENST00000503620 BAZ1BQ9UIG0 1483 aaKnown RBP17.36■□□□□ 0.37
PAPD4-206ENST00000503620 RIMBP3CA6NJZ7 1639 aa17.36■□□□□ 0.37
PAPD4-206ENST00000503620 RIMBP3BA6NNM3 1639 aa17.36■□□□□ 0.37
PAPD4-206ENST00000503620 RIMBP3Q9UFD9 1639 aa17.36■□□□□ 0.37
PAPD4-206ENST00000503620 PEG3Q9GZU2 1588 aa17.29■□□□□ 0.36
PAPD4-206ENST00000503620 ARHGEF11O15085 1522 aa17.24■□□□□ 0.35
PAPD4-206ENST00000503620 CADPSQ9ULU8 1353 aa17.24■□□□□ 0.35
PAPD4-206ENST00000503620 AEBP2Q6ZN18 517 aaPredicted RBP17.16■□□□□ 0.34
PAPD4-206ENST00000503620 CYB5RLQ6IPT4 315 aa17.08■□□□□ 0.32
PAPD4-206ENST00000503620 CEP164Q9UPV0 1460 aa17.06■□□□□ 0.32
PAPD4-206ENST00000503620 TRHP20396 242 aaPredicted RBP17.06■□□□□ 0.32
PAPD4-206ENST00000503620 ARAP1Q96P48 1450 aa17.05■□□□□ 0.32
PAPD4-206ENST00000503620 MROH2BQ7Z745 1585 aa17.02■□□□□ 0.32
PAPD4-206ENST00000503620 FANCD2Q9BXW9 1451 aa17.01■□□□□ 0.31
PAPD4-206ENST00000503620 URB2Q14146 1524 aaKnown RBP17.01■□□□□ 0.31
PAPD4-206ENST00000503620 ZNF608Q9ULD9 1512 aaPredicted RBP16.95■□□□□ 0.3
PAPD4-206ENST00000503620 CFTRP13569 1480 aa16.89■□□□□ 0.29
PAPD4-206ENST00000503620 RSF1Q96T23 1441 aaPredicted RBP16.84■□□□□ 0.29
PAPD4-206ENST00000503620 ILDR1Q86SU0 546 aaPredicted RBP16.8■□□□□ 0.28
PAPD4-206ENST00000503620 IFT140Q96RY7 1462 aa16.8■□□□□ 0.28
PAPD4-206ENST00000503620 EIF4G3O43432 1585 aaKnown RBP16.72■□□□□ 0.27
PAPD4-206ENST00000503620 CHD1O14646 1710 aa16.72■□□□□ 0.27
PAPD4-206ENST00000503620 WIZO95785 1651 aa16.71■□□□□ 0.27
PAPD4-206ENST00000503620 AQRO60306 1485 aaKnown RBP eCLIP16.64■□□□□ 0.25
PAPD4-206ENST00000503620 CLASP1Q7Z460 1538 aa16.63■□□□□ 0.25
PAPD4-206ENST00000503620 TOPBP1Q92547 1522 aa16.62■□□□□ 0.25
PAPD4-206ENST00000503620 TARBP1Q13395 1621 aaKnown RBP16.57■□□□□ 0.24
PAPD4-206ENST00000503620 FBLN2P98095 1184 aa16.52■□□□□ 0.24
PAPD4-206ENST00000503620 PRDM2Q13029 1718 aa16.48■□□□□ 0.23
PAPD4-206ENST00000503620 KDM4FA0A1W2PPD8 638 aa16.46■□□□□ 0.23
PAPD4-206ENST00000503620 GAPVD1Q14C86 1478 aa16.46■□□□□ 0.23
PAPD4-206ENST00000503620 DNMBPQ6XZF7 1577 aa16.44■□□□□ 0.22
PAPD4-206ENST00000503620 TOP2AP11388 1531 aaKnown RBP16.44■□□□□ 0.22
PAPD4-206ENST00000503620 ABCC8Q09428 1581 aa16.42■□□□□ 0.22
PAPD4-206ENST00000503620 POLA1P09884 1462 aaPredicted RBP16.41■□□□□ 0.22
PAPD4-206ENST00000503620 SNAPC4Q5SXM2 1469 aa16.4■□□□□ 0.22
PAPD4-206ENST00000503620 SYNJ1O43426 1573 aa16.39■□□□□ 0.21
PAPD4-206ENST00000503620 TDRD9Q8NDG6 1382 aaKnown RBP16.38■□□□□ 0.21
PAPD4-206ENST00000503620 RAD54L2Q9Y4B4 1467 aa16.36■□□□□ 0.21
PAPD4-206ENST00000503620 ERCC6L2Q5T890 1561 aa16.33■□□□□ 0.2
PAPD4-206ENST00000503620 KIF13AQ9H1H9 1805 aa16.32■□□□□ 0.2
PAPD4-206ENST00000503620 MAGI1Q96QZ7 1491 aaPredicted RBP16.31■□□□□ 0.2
PAPD4-206ENST00000503620 CCDC88BA6NC98 1476 aa16.3■□□□□ 0.2
PAPD4-206ENST00000503620 CHMP7Q8WUX9 453 aaPredicted RBP16.3■□□□□ 0.2
PAPD4-206ENST00000503620 SYNJ2O15056 1496 aa16.29■□□□□ 0.2
PAPD4-206ENST00000503620 SOGA1O94964 1423 aa16.25■□□□□ 0.19
PAPD4-206ENST00000503620 WDR97A6NE52 1622 aa16.24■□□□□ 0.19
PAPD4-206ENST00000503620 GRIN2BQ13224 1484 aa16.22■□□□□ 0.19
PAPD4-206ENST00000503620 ABCC10Q5T3U5 1492 aa16.15■□□□□ 0.18
PAPD4-206ENST00000503620 CEP170Q5SW79 1584 aa16.14■□□□□ 0.17
PAPD4-206ENST00000503620 FGD5Q6ZNL6 1462 aa16.14■□□□□ 0.17
PAPD4-206ENST00000503620 HECW2Q9P2P5 1572 aa16.09■□□□□ 0.17
PAPD4-206ENST00000503620 SHROOM2Q13796 1616 aa16.09■□□□□ 0.17
PAPD4-206ENST00000503620 FAM69CQ0P6D2 419 aa16.08■□□□□ 0.16
PAPD4-206ENST00000503620 NUP160Q12769 1436 aa16.08■□□□□ 0.16
PAPD4-206ENST00000503620 DIP2BQ9P265 1576 aa16.07■□□□□ 0.16
PAPD4-206ENST00000503620 KDM6BO15054 1643 aa16.06■□□□□ 0.16
PAPD4-206ENST00000503620 FBXO41Q8TF61 875 aa16.04■□□□□ 0.16
PAPD4-206ENST00000503620 MAPKBP1O60336 1514 aa16.04■□□□□ 0.16
PAPD4-206ENST00000503620 CUX1P39880 1505 aa16.04■□□□□ 0.16
PAPD4-206ENST00000503620 GRIN2AQ12879 1464 aa16.03■□□□□ 0.16
PAPD4-206ENST00000503620 PBRM1Q86U86 1689 aa16.03■□□□□ 0.16
PAPD4-206ENST00000503620 ADGRL1O94910 1474 aa16.03■□□□□ 0.16
PAPD4-206ENST00000503620 ABCA5Q8WWZ7 1642 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms