RNA–Protein interactions for RNA: ENST00000503583.1

RUFY1-209, Transcript of RUN and FYVE domain containing 1, humanhuman

TSL 2

Gene RUFY1, Length 854 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUFY1-209ENST00000503583 NISCHQ9Y2I1 1504 aa34.39■■■■□ 3.1
RUFY1-209ENST00000503583 CCDC180Q9P1Z9 1646 aa30.64■■■□□ 2.5
RUFY1-209ENST00000503583 ABCC9O60706 1549 aa30.5■■■□□ 2.47
RUFY1-209ENST00000503583 RB1CC1Q8TDY2 1594 aa29.12■■■□□ 2.25
RUFY1-209ENST00000503583 DCAF8L2P0C7V8 631 aa29.1■■■□□ 2.25
RUFY1-209ENST00000503583 NACADO15069 1562 aa29.01■■■□□ 2.23
RUFY1-209ENST00000503583 MYO15BQ96JP2 1530 aa28.71■■■□□ 2.19
RUFY1-209ENST00000503583 PABPN1Q86U42 306 aaKnown RBP eCLIP28.54■■■□□ 2.16
RUFY1-209ENST00000503583 ZCCHC6Q5VYS8 1495 aaKnown RBP28.5■■■□□ 2.15
RUFY1-209ENST00000503583 DNAJC5BQ9UF47 199 aa28.49■■■□□ 2.15
RUFY1-209ENST00000503583 DCAF1Q9Y4B6 1507 aa28.42■■■□□ 2.14
RUFY1-209ENST00000503583 UNC13AQ9UPW8 1703 aa28.34■■■□□ 2.13
RUFY1-209ENST00000503583 BICRAQ9NZM4 1560 aa28.22■■■□□ 2.11
RUFY1-209ENST00000503583 SCRIBQ14160 1630 aa27.95■■■□□ 2.06
RUFY1-209ENST00000503583 SHROOM4Q9ULL8 1493 aa27.9■■■□□ 2.06
RUFY1-209ENST00000503583 EIF4G1Q04637 1599 aaKnown RBP27.53■■■□□ 2
RUFY1-209ENST00000503583 CC2D2AQ9P2K1 1620 aa27.52■■■□□ 2
RUFY1-209ENST00000503583 CECR2Q9BXF3 1484 aa27.46■■□□□ 1.99
RUFY1-209ENST00000503583 NCAPD3P42695 1498 aa26.82■■□□□ 1.88
RUFY1-209ENST00000503583 ATAD2BQ9ULI0 1458 aa26.74■■□□□ 1.87
RUFY1-209ENST00000503583 SMARCA4P51532 1647 aa26.71■■□□□ 1.87
RUFY1-209ENST00000503583 SMARCA2P51531 1590 aa26.66■■□□□ 1.86
RUFY1-209ENST00000503583 BAZ1AQ9NRL2 1556 aaPredicted RBP26.66■■□□□ 1.86
RUFY1-209ENST00000503583 HMGXB3Q12766 1538 aa26.55■■□□□ 1.84
RUFY1-209ENST00000503583 BAZ1BQ9UIG0 1483 aaKnown RBP26.49■■□□□ 1.83
RUFY1-209ENST00000503583 MROH2BQ7Z745 1585 aa26.48■■□□□ 1.83
RUFY1-209ENST00000503583 PEG3Q9GZU2 1588 aa26.46■■□□□ 1.83
RUFY1-209ENST00000503583 ERCC6Q03468 1493 aa26.33■■□□□ 1.81
RUFY1-209ENST00000503583 NESP48681 1621 aa26.25■■□□□ 1.79
RUFY1-209ENST00000503583 CUX2O14529 1486 aa26.19■■□□□ 1.78
RUFY1-209ENST00000503583 WIZO95785 1651 aa26.14■■□□□ 1.78
RUFY1-209ENST00000503583 LAMC3Q9Y6N6 1575 aa26.11■■□□□ 1.77
RUFY1-209ENST00000503583 RSF1Q96T23 1441 aaPredicted RBP26.07■■□□□ 1.76
RUFY1-209ENST00000503583 CADPSQ9ULU8 1353 aa26.06■■□□□ 1.76
RUFY1-209ENST00000503583 PDS5BQ9NTI5 1447 aa26.05■■□□□ 1.76
RUFY1-209ENST00000503583 DNAJC5Q9H3Z4 198 aa26.02■■□□□ 1.76
RUFY1-209ENST00000503583 THOC2Q8NI27 1593 aaKnown RBP25.85■■□□□ 1.73
RUFY1-209ENST00000503583 TOP2AP11388 1531 aaKnown RBP25.83■■□□□ 1.73
RUFY1-209ENST00000503583 KIF21AQ7Z4S6 1674 aa25.83■■□□□ 1.73
RUFY1-209ENST00000503583 CFTRP13569 1480 aa25.75■■□□□ 1.71
RUFY1-209ENST00000503583 MRC2Q9UBG0 1479 aa25.72■■□□□ 1.71
RUFY1-209ENST00000503583 FANCD2Q9BXW9 1451 aa25.68■■□□□ 1.7
RUFY1-209ENST00000503583 CEP164Q9UPV0 1460 aa25.66■■□□□ 1.7
RUFY1-209ENST00000503583 CCDC88BA6NC98 1476 aa25.62■■□□□ 1.69
RUFY1-209ENST00000503583 WDR62O43379 1518 aa25.61■■□□□ 1.69
RUFY1-209ENST00000503583 URB2Q14146 1524 aaKnown RBP25.42■■□□□ 1.66
RUFY1-209ENST00000503583 PRDM2Q13029 1718 aa25.34■■□□□ 1.65
RUFY1-209ENST00000503583 ABCC8Q09428 1581 aa25.25■■□□□ 1.63
RUFY1-209ENST00000503583 TOPBP1Q92547 1522 aa25.22■■□□□ 1.63
RUFY1-209ENST00000503583 SUPT5HO00267 1087 aaKnown RBP25.21■■□□□ 1.63
RUFY1-209ENST00000503583 OSCARQ8IYS5 282 aa25.2■■□□□ 1.62
RUFY1-209ENST00000503583 IFT140Q96RY7 1462 aa25.19■■□□□ 1.62
RUFY1-209ENST00000503583 DNMBPQ6XZF7 1577 aa25.11■■□□□ 1.61
RUFY1-209ENST00000503583 ZNF608Q9ULD9 1512 aaPredicted RBP25.08■■□□□ 1.61
RUFY1-209ENST00000503583 POLA1P09884 1462 aaPredicted RBP24.96■■□□□ 1.59
RUFY1-209ENST00000503583 SOGA1O94964 1423 aa24.95■■□□□ 1.59
RUFY1-209ENST00000503583 TRIM41Q8WV44 630 aa24.95■■□□□ 1.58
RUFY1-209ENST00000503583 AQRO60306 1485 aaKnown RBP eCLIP24.95■■□□□ 1.58
RUFY1-209ENST00000503583 TARBP1Q13395 1621 aaKnown RBP24.92■■□□□ 1.58
RUFY1-209ENST00000503583 RAD54L2Q9Y4B4 1467 aa24.9■■□□□ 1.58
RUFY1-209ENST00000503583 EIF4G3O43432 1585 aaKnown RBP24.87■■□□□ 1.57
RUFY1-209ENST00000503583 TDRD9Q8NDG6 1382 aaKnown RBP24.86■■□□□ 1.57
RUFY1-209ENST00000503583 FGD5Q6ZNL6 1462 aa24.84■■□□□ 1.57
RUFY1-209ENST00000503583 CUX1P39880 1505 aa24.84■■□□□ 1.57
RUFY1-209ENST00000503583 FBLN2P98095 1184 aa24.81■■□□□ 1.56
RUFY1-209ENST00000503583 WDR97A6NE52 1622 aa24.7■■□□□ 1.54
RUFY1-209ENST00000503583 CHMP7Q8WUX9 453 aaPredicted RBP24.69■■□□□ 1.54
RUFY1-209ENST00000503583 GRIN2BQ13224 1484 aa24.65■■□□□ 1.54
RUFY1-209ENST00000503583 SNAPC4Q5SXM2 1469 aa24.64■■□□□ 1.53
RUFY1-209ENST00000503583 CHD1O14646 1710 aa24.63■■□□□ 1.53
RUFY1-209ENST00000503583 RIMBP3CA6NJZ7 1639 aa24.62■■□□□ 1.53
RUFY1-209ENST00000503583 RIMBP3BA6NNM3 1639 aa24.62■■□□□ 1.53
RUFY1-209ENST00000503583 RIMBP3Q9UFD9 1639 aa24.62■■□□□ 1.53
RUFY1-209ENST00000503583 GAPVD1Q14C86 1478 aa24.6■■□□□ 1.53
RUFY1-209ENST00000503583 MAGI1Q96QZ7 1491 aaPredicted RBP24.6■■□□□ 1.53
RUFY1-209ENST00000503583 ARHGEF11O15085 1522 aa24.6■■□□□ 1.53
RUFY1-209ENST00000503583 ABCA10Q8WWZ4 1543 aa24.6■■□□□ 1.53
RUFY1-209ENST00000503583 WRNQ14191 1432 aaPredicted RBP eCLIP24.6■■□□□ 1.53
RUFY1-209ENST00000503583 CYB5RLQ6IPT4 315 aa24.56■■□□□ 1.52
RUFY1-209ENST00000503583 SYNJ2O15056 1496 aa24.52■■□□□ 1.52
RUFY1-209ENST00000503583 TOP2BQ02880 1626 aa24.51■■□□□ 1.51
RUFY1-209ENST00000503583 BIVM-ERCC5R4GMW8 1640 aa24.47■■□□□ 1.51
RUFY1-209ENST00000503583 SYNJ1O43426 1573 aa24.46■■□□□ 1.51
RUFY1-209ENST00000503583 ABCA5Q8WWZ7 1642 aa24.45■■□□□ 1.5
RUFY1-209ENST00000503583 PBRM1Q86U86 1689 aa24.43■■□□□ 1.5
RUFY1-209ENST00000503583 CLASP1Q7Z460 1538 aa24.4■■□□□ 1.5
RUFY1-209ENST00000503583 ARAP1Q96P48 1450 aa24.37■■□□□ 1.49
RUFY1-209ENST00000503583 FHAD1B1AJZ9 1412 aa24.32■■□□□ 1.48
RUFY1-209ENST00000503583 GRIN2AQ12879 1464 aa24.3■■□□□ 1.48
RUFY1-209ENST00000503583 ERICH3Q5RHP9 1530 aa24.29■■□□□ 1.48
RUFY1-209ENST00000503583 ADAMTS12P58397 1594 aa24.25■■□□□ 1.47
RUFY1-209ENST00000503583 NUP160Q12769 1436 aa24.22■■□□□ 1.47
RUFY1-209ENST00000503583 TRHP20396 242 aaPredicted RBP24.21■■□□□ 1.47
RUFY1-209ENST00000503583 CEP170Q5SW79 1584 aa24.16■■□□□ 1.46
RUFY1-209ENST00000503583 IGF1RP08069 1367 aa24.14■■□□□ 1.45
RUFY1-209ENST00000503583 KIF27Q86VH2 1401 aa24.13■■□□□ 1.45
RUFY1-209ENST00000503583 JPH4Q96JJ6 628 aa24.13■■□□□ 1.45
RUFY1-209ENST00000503583 ERCC6L2Q5T890 1561 aa24.04■■□□□ 1.44
RUFY1-209ENST00000503583 SHROOM2Q13796 1616 aa24.02■■□□□ 1.44
RUFY1-209ENST00000503583 PRG4Q92954 1404 aaPredicted RBP24.01■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms