RNA–Protein interactions for RNA: ENST00000503515.1

TSC22D3-211, Transcript of TSC22 domain family member 3, humanhuman

TSL 2

Gene TSC22D3, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC22D3-211ENST00000503515 NISCHQ9Y2I1 1504 aa29.64■■■□□ 2.34
TSC22D3-211ENST00000503515 CCDC180Q9P1Z9 1646 aa26.52■■□□□ 1.84
TSC22D3-211ENST00000503515 ABCC9O60706 1549 aa26.07■■□□□ 1.76
TSC22D3-211ENST00000503515 RB1CC1Q8TDY2 1594 aa24.99■■□□□ 1.59
TSC22D3-211ENST00000503515 NACADO15069 1562 aa24.91■■□□□ 1.58
TSC22D3-211ENST00000503515 MYO15BQ96JP2 1530 aa24.71■■□□□ 1.55
TSC22D3-211ENST00000503515 ZCCHC6Q5VYS8 1495 aaKnown RBP24.69■■□□□ 1.54
TSC22D3-211ENST00000503515 DCAF8L2P0C7V8 631 aa24.61■■□□□ 1.53
TSC22D3-211ENST00000503515 UNC13AQ9UPW8 1703 aa24.55■■□□□ 1.52
TSC22D3-211ENST00000503515 DCAF1Q9Y4B6 1507 aa24.53■■□□□ 1.52
TSC22D3-211ENST00000503515 BICRAQ9NZM4 1560 aa24.33■■□□□ 1.49
TSC22D3-211ENST00000503515 PABPN1Q86U42 306 aaKnown RBP eCLIP24.24■■□□□ 1.47
TSC22D3-211ENST00000503515 SCRIBQ14160 1630 aa24.14■■□□□ 1.46
TSC22D3-211ENST00000503515 DNAJC5BQ9UF47 199 aa24.11■■□□□ 1.45
TSC22D3-211ENST00000503515 SHROOM4Q9ULL8 1493 aa24■■□□□ 1.43
TSC22D3-211ENST00000503515 EIF4G1Q04637 1599 aaKnown RBP23.66■■□□□ 1.38
TSC22D3-211ENST00000503515 CC2D2AQ9P2K1 1620 aa23.62■■□□□ 1.37
TSC22D3-211ENST00000503515 CECR2Q9BXF3 1484 aa23.44■■□□□ 1.34
TSC22D3-211ENST00000503515 SMARCA4P51532 1647 aa23.08■■□□□ 1.29
TSC22D3-211ENST00000503515 BAZ1AQ9NRL2 1556 aaPredicted RBP22.97■■□□□ 1.27
TSC22D3-211ENST00000503515 NCAPD3P42695 1498 aa22.97■■□□□ 1.27
TSC22D3-211ENST00000503515 ATAD2BQ9ULI0 1458 aa22.97■■□□□ 1.27
TSC22D3-211ENST00000503515 SMARCA2P51531 1590 aa22.93■■□□□ 1.26
TSC22D3-211ENST00000503515 HMGXB3Q12766 1538 aa22.9■■□□□ 1.26
TSC22D3-211ENST00000503515 PEG3Q9GZU2 1588 aa22.88■■□□□ 1.25
TSC22D3-211ENST00000503515 MROH2BQ7Z745 1585 aa22.85■■□□□ 1.25
TSC22D3-211ENST00000503515 BAZ1BQ9UIG0 1483 aaKnown RBP22.74■■□□□ 1.23
TSC22D3-211ENST00000503515 WIZO95785 1651 aa22.62■■□□□ 1.21
TSC22D3-211ENST00000503515 NESP48681 1621 aa22.53■■□□□ 1.2
TSC22D3-211ENST00000503515 RSF1Q96T23 1441 aaPredicted RBP22.47■■□□□ 1.19
TSC22D3-211ENST00000503515 ERCC6Q03468 1493 aa22.44■■□□□ 1.18
TSC22D3-211ENST00000503515 LAMC3Q9Y6N6 1575 aa22.42■■□□□ 1.18
TSC22D3-211ENST00000503515 DNAJC5Q9H3Z4 198 aa22.41■■□□□ 1.18
TSC22D3-211ENST00000503515 TOP2AP11388 1531 aaKnown RBP22.35■■□□□ 1.17
TSC22D3-211ENST00000503515 CUX2O14529 1486 aa22.34■■□□□ 1.17
TSC22D3-211ENST00000503515 THOC2Q8NI27 1593 aaKnown RBP22.32■■□□□ 1.16
TSC22D3-211ENST00000503515 KIF21AQ7Z4S6 1674 aa22.31■■□□□ 1.16
TSC22D3-211ENST00000503515 CADPSQ9ULU8 1353 aa22.25■■□□□ 1.15
TSC22D3-211ENST00000503515 PDS5BQ9NTI5 1447 aa22.2■■□□□ 1.14
TSC22D3-211ENST00000503515 CFTRP13569 1480 aa22.13■■□□□ 1.13
TSC22D3-211ENST00000503515 MRC2Q9UBG0 1479 aa22.06■■□□□ 1.12
TSC22D3-211ENST00000503515 PRDM2Q13029 1718 aa22.04■■□□□ 1.12
TSC22D3-211ENST00000503515 WDR62O43379 1518 aa22.04■■□□□ 1.12
TSC22D3-211ENST00000503515 CCDC88BA6NC98 1476 aa22.03■■□□□ 1.12
TSC22D3-211ENST00000503515 FANCD2Q9BXW9 1451 aa22.03■■□□□ 1.12
TSC22D3-211ENST00000503515 CEP164Q9UPV0 1460 aa22.03■■□□□ 1.12
TSC22D3-211ENST00000503515 URB2Q14146 1524 aaKnown RBP21.88■■□□□ 1.09
TSC22D3-211ENST00000503515 TOPBP1Q92547 1522 aa21.68■■□□□ 1.06
TSC22D3-211ENST00000503515 DNMBPQ6XZF7 1577 aa21.65■■□□□ 1.06
TSC22D3-211ENST00000503515 ABCC8Q09428 1581 aa21.59■■□□□ 1.05
TSC22D3-211ENST00000503515 SUPT5HO00267 1087 aaKnown RBP21.58■■□□□ 1.05
TSC22D3-211ENST00000503515 IFT140Q96RY7 1462 aa21.57■■□□□ 1.04
TSC22D3-211ENST00000503515 ZNF608Q9ULD9 1512 aaPredicted RBP21.54■■□□□ 1.04
TSC22D3-211ENST00000503515 TARBP1Q13395 1621 aaKnown RBP21.51■■□□□ 1.03
TSC22D3-211ENST00000503515 POLA1P09884 1462 aaPredicted RBP21.49■■□□□ 1.03
TSC22D3-211ENST00000503515 EIF4G3O43432 1585 aaKnown RBP21.48■■□□□ 1.03
TSC22D3-211ENST00000503515 CUX1P39880 1505 aa21.46■■□□□ 1.03
TSC22D3-211ENST00000503515 FGD5Q6ZNL6 1462 aa21.39■■□□□ 1.02
TSC22D3-211ENST00000503515 RAD54L2Q9Y4B4 1467 aa21.37■■□□□ 1.01
TSC22D3-211ENST00000503515 WDR97A6NE52 1622 aa21.35■■□□□ 1.01
TSC22D3-211ENST00000503515 AQRO60306 1485 aaKnown RBP eCLIP21.32■■□□□ 1
TSC22D3-211ENST00000503515 SOGA1O94964 1423 aa21.3■■□□□ 1
TSC22D3-211ENST00000503515 CHD1O14646 1710 aa21.26■□□□□ 0.99
TSC22D3-211ENST00000503515 BIVM-ERCC5R4GMW8 1640 aa21.25■□□□□ 0.99
TSC22D3-211ENST00000503515 OSCARQ8IYS5 282 aa21.23■□□□□ 0.99
TSC22D3-211ENST00000503515 TDRD9Q8NDG6 1382 aaKnown RBP21.23■□□□□ 0.99
TSC22D3-211ENST00000503515 SYNJ1O43426 1573 aa21.22■□□□□ 0.99
TSC22D3-211ENST00000503515 TOP2BQ02880 1626 aa21.22■□□□□ 0.99
TSC22D3-211ENST00000503515 TRIM41Q8WV44 630 aa21.21■□□□□ 0.99
TSC22D3-211ENST00000503515 ABCA5Q8WWZ7 1642 aa21.18■□□□□ 0.98
TSC22D3-211ENST00000503515 ABCA10Q8WWZ4 1543 aa21.18■□□□□ 0.98
TSC22D3-211ENST00000503515 PBRM1Q86U86 1689 aa21.18■□□□□ 0.98
TSC22D3-211ENST00000503515 SNAPC4Q5SXM2 1469 aa21.17■□□□□ 0.98
TSC22D3-211ENST00000503515 WRNQ14191 1432 aaPredicted RBP eCLIP21.16■□□□□ 0.98
TSC22D3-211ENST00000503515 GRIN2BQ13224 1484 aa21.13■□□□□ 0.97
TSC22D3-211ENST00000503515 MAGI1Q96QZ7 1491 aaPredicted RBP21.12■□□□□ 0.97
TSC22D3-211ENST00000503515 RIMBP3CA6NJZ7 1639 aa21.11■□□□□ 0.97
TSC22D3-211ENST00000503515 RIMBP3BA6NNM3 1639 aa21.11■□□□□ 0.97
TSC22D3-211ENST00000503515 RIMBP3Q9UFD9 1639 aa21.11■□□□□ 0.97
TSC22D3-211ENST00000503515 GAPVD1Q14C86 1478 aa21.09■□□□□ 0.97
TSC22D3-211ENST00000503515 ARHGEF11O15085 1522 aa21.05■□□□□ 0.96
TSC22D3-211ENST00000503515 SYNJ2O15056 1496 aa21.03■□□□□ 0.96
TSC22D3-211ENST00000503515 CLASP1Q7Z460 1538 aa21.03■□□□□ 0.96
TSC22D3-211ENST00000503515 FBLN2P98095 1184 aa20.99■□□□□ 0.95
TSC22D3-211ENST00000503515 ADAMTS12P58397 1594 aa20.98■□□□□ 0.95
TSC22D3-211ENST00000503515 ERICH3Q5RHP9 1530 aa20.92■□□□□ 0.94
TSC22D3-211ENST00000503515 CHMP7Q8WUX9 453 aaPredicted RBP20.91■□□□□ 0.94
TSC22D3-211ENST00000503515 GRIN2AQ12879 1464 aa20.88■□□□□ 0.93
TSC22D3-211ENST00000503515 ARAP1Q96P48 1450 aa20.88■□□□□ 0.93
TSC22D3-211ENST00000503515 CEP170Q5SW79 1584 aa20.85■□□□□ 0.93
TSC22D3-211ENST00000503515 FHAD1B1AJZ9 1412 aa20.84■□□□□ 0.93
TSC22D3-211ENST00000503515 NUP160Q12769 1436 aa20.82■□□□□ 0.92
TSC22D3-211ENST00000503515 SHROOM2Q13796 1616 aa20.75■□□□□ 0.91
TSC22D3-211ENST00000503515 ERCC6L2Q5T890 1561 aa20.72■□□□□ 0.91
TSC22D3-211ENST00000503515 CUL7Q14999 1698 aa20.71■□□□□ 0.91
TSC22D3-211ENST00000503515 CYB5RLQ6IPT4 315 aa20.71■□□□□ 0.91
TSC22D3-211ENST00000503515 KIF27Q86VH2 1401 aa20.7■□□□□ 0.9
TSC22D3-211ENST00000503515 RUSC2Q8N2Y8 1516 aa20.7■□□□□ 0.9
TSC22D3-211ENST00000503515 IGF1RP08069 1367 aa20.66■□□□□ 0.9
TSC22D3-211ENST00000503515 KIAA0586Q9BVV6 1533 aa20.52■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms