RNA–Protein interactions for RNA: ENST00000503507.1

CCNB1-202, Transcript of cyclin B1, humanhuman

TSL 5

Gene CCNB1, Length 750 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNB1-202ENST00000503507 NISCHQ9Y2I1 1504 aa37.58■■■■□ 3.61
CCNB1-202ENST00000503507 CCDC180Q9P1Z9 1646 aa33.59■■■□□ 2.97
CCNB1-202ENST00000503507 ABCC9O60706 1549 aa32.87■■■□□ 2.85
CCNB1-202ENST00000503507 RB1CC1Q8TDY2 1594 aa31.63■■■□□ 2.65
CCNB1-202ENST00000503507 NACADO15069 1562 aa31.52■■■□□ 2.64
CCNB1-202ENST00000503507 DCAF8L2P0C7V8 631 aa31.44■■■□□ 2.62
CCNB1-202ENST00000503507 ZCCHC6Q5VYS8 1495 aaKnown RBP31.3■■■□□ 2.6
CCNB1-202ENST00000503507 MYO15BQ96JP2 1530 aa31.25■■■□□ 2.59
CCNB1-202ENST00000503507 DCAF1Q9Y4B6 1507 aa31.08■■■□□ 2.57
CCNB1-202ENST00000503507 UNC13AQ9UPW8 1703 aa30.98■■■□□ 2.55
CCNB1-202ENST00000503507 SCRIBQ14160 1630 aa30.62■■■□□ 2.49
CCNB1-202ENST00000503507 PABPN1Q86U42 306 aaKnown RBP eCLIP30.61■■■□□ 2.49
CCNB1-202ENST00000503507 BICRAQ9NZM4 1560 aa30.59■■■□□ 2.49
CCNB1-202ENST00000503507 SHROOM4Q9ULL8 1493 aa30.31■■■□□ 2.44
CCNB1-202ENST00000503507 DNAJC5BQ9UF47 199 aa30.08■■■□□ 2.41
CCNB1-202ENST00000503507 EIF4G1Q04637 1599 aaKnown RBP29.84■■■□□ 2.37
CCNB1-202ENST00000503507 CC2D2AQ9P2K1 1620 aa29.76■■■□□ 2.35
CCNB1-202ENST00000503507 CECR2Q9BXF3 1484 aa29.53■■■□□ 2.32
CCNB1-202ENST00000503507 SMARCA4P51532 1647 aa29.25■■■□□ 2.27
CCNB1-202ENST00000503507 BAZ1AQ9NRL2 1556 aaPredicted RBP29.19■■■□□ 2.26
CCNB1-202ENST00000503507 SMARCA2P51531 1590 aa29.07■■■□□ 2.24
CCNB1-202ENST00000503507 ATAD2BQ9ULI0 1458 aa29.03■■■□□ 2.24
CCNB1-202ENST00000503507 NCAPD3P42695 1498 aa29■■■□□ 2.23
CCNB1-202ENST00000503507 HMGXB3Q12766 1538 aa28.95■■■□□ 2.23
CCNB1-202ENST00000503507 MROH2BQ7Z745 1585 aa28.95■■■□□ 2.22
CCNB1-202ENST00000503507 PEG3Q9GZU2 1588 aa28.92■■■□□ 2.22
CCNB1-202ENST00000503507 BAZ1BQ9UIG0 1483 aaKnown RBP28.85■■■□□ 2.21
CCNB1-202ENST00000503507 WIZO95785 1651 aa28.7■■■□□ 2.19
CCNB1-202ENST00000503507 RSF1Q96T23 1441 aaPredicted RBP28.54■■■□□ 2.16
CCNB1-202ENST00000503507 ERCC6Q03468 1493 aa28.4■■■□□ 2.14
CCNB1-202ENST00000503507 TOP2AP11388 1531 aaKnown RBP28.38■■■□□ 2.13
CCNB1-202ENST00000503507 NESP48681 1621 aa28.38■■■□□ 2.13
CCNB1-202ENST00000503507 LAMC3Q9Y6N6 1575 aa28.37■■■□□ 2.13
CCNB1-202ENST00000503507 KIF21AQ7Z4S6 1674 aa28.18■■■□□ 2.1
CCNB1-202ENST00000503507 CADPSQ9ULU8 1353 aa28.16■■■□□ 2.1
CCNB1-202ENST00000503507 PDS5BQ9NTI5 1447 aa28.13■■■□□ 2.09
CCNB1-202ENST00000503507 CUX2O14529 1486 aa28.08■■■□□ 2.09
CCNB1-202ENST00000503507 THOC2Q8NI27 1593 aaKnown RBP28.06■■■□□ 2.08
CCNB1-202ENST00000503507 PRDM2Q13029 1718 aa28■■■□□ 2.07
CCNB1-202ENST00000503507 CFTRP13569 1480 aa27.99■■■□□ 2.07
CCNB1-202ENST00000503507 CCDC88BA6NC98 1476 aa27.98■■■□□ 2.07
CCNB1-202ENST00000503507 CEP164Q9UPV0 1460 aa27.91■■■□□ 2.06
CCNB1-202ENST00000503507 FANCD2Q9BXW9 1451 aa27.89■■■□□ 2.06
CCNB1-202ENST00000503507 MRC2Q9UBG0 1479 aa27.87■■■□□ 2.05
CCNB1-202ENST00000503507 WDR62O43379 1518 aa27.78■■■□□ 2.04
CCNB1-202ENST00000503507 SUPT5HO00267 1087 aaKnown RBP27.78■■■□□ 2.04
CCNB1-202ENST00000503507 URB2Q14146 1524 aaKnown RBP27.6■■■□□ 2.01
CCNB1-202ENST00000503507 ABCC8Q09428 1581 aa27.45■■□□□ 1.99
CCNB1-202ENST00000503507 DNMBPQ6XZF7 1577 aa27.44■■□□□ 1.98
CCNB1-202ENST00000503507 TOPBP1Q92547 1522 aa27.44■■□□□ 1.98
CCNB1-202ENST00000503507 IFT140Q96RY7 1462 aa27.3■■□□□ 1.96
CCNB1-202ENST00000503507 DNAJC5Q9H3Z4 198 aa27.22■■□□□ 1.95
CCNB1-202ENST00000503507 POLA1P09884 1462 aaPredicted RBP27.19■■□□□ 1.94
CCNB1-202ENST00000503507 CUX1P39880 1505 aa27.18■■□□□ 1.94
CCNB1-202ENST00000503507 TARBP1Q13395 1621 aaKnown RBP27.16■■□□□ 1.94
CCNB1-202ENST00000503507 ZNF608Q9ULD9 1512 aaPredicted RBP27.15■■□□□ 1.94
CCNB1-202ENST00000503507 EIF4G3O43432 1585 aaKnown RBP27.14■■□□□ 1.94
CCNB1-202ENST00000503507 FGD5Q6ZNL6 1462 aa27.13■■□□□ 1.93
CCNB1-202ENST00000503507 RAD54L2Q9Y4B4 1467 aa27.06■■□□□ 1.92
CCNB1-202ENST00000503507 SOGA1O94964 1423 aa27.05■■□□□ 1.92
CCNB1-202ENST00000503507 WDR97A6NE52 1622 aa27■■□□□ 1.91
CCNB1-202ENST00000503507 BIVM-ERCC5R4GMW8 1640 aa27■■□□□ 1.91
CCNB1-202ENST00000503507 WRNQ14191 1432 aaPredicted RBP eCLIP26.98■■□□□ 1.91
CCNB1-202ENST00000503507 AQRO60306 1485 aaKnown RBP eCLIP26.97■■□□□ 1.919e-10■■■■■ 27.1
CCNB1-202ENST00000503507 TOP2BQ02880 1626 aa26.97■■□□□ 1.91
CCNB1-202ENST00000503507 SYNJ1O43426 1573 aa26.95■■□□□ 1.9
CCNB1-202ENST00000503507 TDRD9Q8NDG6 1382 aaKnown RBP26.89■■□□□ 1.9
CCNB1-202ENST00000503507 CHD1O14646 1710 aa26.87■■□□□ 1.89
CCNB1-202ENST00000503507 PBRM1Q86U86 1689 aa26.86■■□□□ 1.89
CCNB1-202ENST00000503507 ABCA10Q8WWZ4 1543 aa26.85■■□□□ 1.89
CCNB1-202ENST00000503507 OSCARQ8IYS5 282 aa26.83■■□□□ 1.89
CCNB1-202ENST00000503507 ABCA5Q8WWZ7 1642 aa26.8■■□□□ 1.88
CCNB1-202ENST00000503507 GRIN2BQ13224 1484 aa26.79■■□□□ 1.88
CCNB1-202ENST00000503507 SNAPC4Q5SXM2 1469 aa26.78■■□□□ 1.88
CCNB1-202ENST00000503507 GAPVD1Q14C86 1478 aa26.77■■□□□ 1.88
CCNB1-202ENST00000503507 MAGI1Q96QZ7 1491 aaPredicted RBP26.74■■□□□ 1.87
CCNB1-202ENST00000503507 FBLN2P98095 1184 aa26.71■■□□□ 1.87
CCNB1-202ENST00000503507 SYNJ2O15056 1496 aa26.62■■□□□ 1.85
CCNB1-202ENST00000503507 CHMP7Q8WUX9 453 aaPredicted RBP26.6■■□□□ 1.85
CCNB1-202ENST00000503507 ADAMTS12P58397 1594 aa26.57■■□□□ 1.84
CCNB1-202ENST00000503507 ERICH3Q5RHP9 1530 aa26.55■■□□□ 1.84
CCNB1-202ENST00000503507 RIMBP3CA6NJZ7 1639 aa26.53■■□□□ 1.84
CCNB1-202ENST00000503507 RIMBP3BA6NNM3 1639 aa26.53■■□□□ 1.84
CCNB1-202ENST00000503507 RIMBP3Q9UFD9 1639 aa26.53■■□□□ 1.84
CCNB1-202ENST00000503507 ARHGEF11O15085 1522 aa26.47■■□□□ 1.83
CCNB1-202ENST00000503507 CLASP1Q7Z460 1538 aa26.47■■□□□ 1.83
CCNB1-202ENST00000503507 FHAD1B1AJZ9 1412 aa26.45■■□□□ 1.82
CCNB1-202ENST00000503507 GRIN2AQ12879 1464 aa26.44■■□□□ 1.82
CCNB1-202ENST00000503507 KIF27Q86VH2 1401 aa26.42■■□□□ 1.82
CCNB1-202ENST00000503507 TRIM41Q8WV44 630 aa26.39■■□□□ 1.82
CCNB1-202ENST00000503507 CUL7Q14999 1698 aa26.37■■□□□ 1.81
CCNB1-202ENST00000503507 CEP170Q5SW79 1584 aa26.33■■□□□ 1.81
CCNB1-202ENST00000503507 NUP160Q12769 1436 aa26.29■■□□□ 1.8
CCNB1-202ENST00000503507 IGF1RP08069 1367 aa26.23■■□□□ 1.79
CCNB1-202ENST00000503507 ARAP1Q96P48 1450 aa26.23■■□□□ 1.79
CCNB1-202ENST00000503507 RUSC2Q8N2Y8 1516 aa26.19■■□□□ 1.78
CCNB1-202ENST00000503507 SHROOM2Q13796 1616 aa26.17■■□□□ 1.78
CCNB1-202ENST00000503507 CYB5RLQ6IPT4 315 aa26.16■■□□□ 1.78
CCNB1-202ENST00000503507 CARMIL1Q5VZK9 1371 aa26.13■■□□□ 1.77
CCNB1-202ENST00000503507 ERCC6L2Q5T890 1561 aa26.07■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms