RNA–Protein interactions for RNA: ENST00000503457.1

PALLD-204, Transcript of palladin, cytoskeletal associated protein, humanhuman

TSL 3

Gene PALLD, Length 607 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALLD-204ENST00000503457 NISCHQ9Y2I1 1504 aa36.15■■■■□ 3.38
PALLD-204ENST00000503457 ABCC9O60706 1549 aa32.34■■■□□ 2.77
PALLD-204ENST00000503457 CCDC180Q9P1Z9 1646 aa32.29■■■□□ 2.76
PALLD-204ENST00000503457 RB1CC1Q8TDY2 1594 aa30.77■■■□□ 2.52
PALLD-204ENST00000503457 DCAF8L2P0C7V8 631 aa30.69■■■□□ 2.5
PALLD-204ENST00000503457 NACADO15069 1562 aa30.58■■■□□ 2.49
PALLD-204ENST00000503457 DNAJC5BQ9UF47 199 aa30.27■■■□□ 2.44
PALLD-204ENST00000503457 PABPN1Q86U42 306 aaKnown RBP eCLIP30.21■■■□□ 2.43
PALLD-204ENST00000503457 MYO15BQ96JP2 1530 aa30.17■■■□□ 2.42
PALLD-204ENST00000503457 ZCCHC6Q5VYS8 1495 aaKnown RBP29.95■■■□□ 2.39
PALLD-204ENST00000503457 UNC13AQ9UPW8 1703 aa29.91■■■□□ 2.38
PALLD-204ENST00000503457 DCAF1Q9Y4B6 1507 aa29.83■■■□□ 2.37
PALLD-204ENST00000503457 BICRAQ9NZM4 1560 aa29.82■■■□□ 2.36
PALLD-204ENST00000503457 SCRIBQ14160 1630 aa29.5■■■□□ 2.31
PALLD-204ENST00000503457 SHROOM4Q9ULL8 1493 aa29.45■■■□□ 2.31
PALLD-204ENST00000503457 CC2D2AQ9P2K1 1620 aa29.15■■■□□ 2.26
PALLD-204ENST00000503457 CECR2Q9BXF3 1484 aa29.11■■■□□ 2.25
PALLD-204ENST00000503457 EIF4G1Q04637 1599 aaKnown RBP29.11■■■□□ 2.25
PALLD-204ENST00000503457 NCAPD3P42695 1498 aa28.27■■■□□ 2.12
PALLD-204ENST00000503457 ATAD2BQ9ULI0 1458 aa28.2■■■□□ 2.1
PALLD-204ENST00000503457 SMARCA4P51532 1647 aa28.13■■■□□ 2.09
PALLD-204ENST00000503457 SMARCA2P51531 1590 aa28.11■■■□□ 2.09
PALLD-204ENST00000503457 BAZ1AQ9NRL2 1556 aaPredicted RBP28.04■■■□□ 2.08
PALLD-204ENST00000503457 HMGXB3Q12766 1538 aa28■■■□□ 2.07
PALLD-204ENST00000503457 ERCC6Q03468 1493 aa27.94■■■□□ 2.06
PALLD-204ENST00000503457 BAZ1BQ9UIG0 1483 aaKnown RBP27.94■■■□□ 2.06
PALLD-204ENST00000503457 MROH2BQ7Z745 1585 aa27.86■■■□□ 2.05
PALLD-204ENST00000503457 PEG3Q9GZU2 1588 aa27.83■■■□□ 2.05
PALLD-204ENST00000503457 CUX2O14529 1486 aa27.79■■■□□ 2.04
PALLD-204ENST00000503457 NESP48681 1621 aa27.78■■■□□ 2.04
PALLD-204ENST00000503457 DNAJC5Q9H3Z4 198 aa27.74■■■□□ 2.03
PALLD-204ENST00000503457 LAMC3Q9Y6N6 1575 aa27.56■■■□□ 2
PALLD-204ENST00000503457 PDS5BQ9NTI5 1447 aa27.5■■□□□ 1.99
PALLD-204ENST00000503457 WIZO95785 1651 aa27.49■■□□□ 1.99
PALLD-204ENST00000503457 CADPSQ9ULU8 1353 aa27.46■■□□□ 1.99
PALLD-204ENST00000503457 THOC2Q8NI27 1593 aaKnown RBP27.39■■□□□ 1.97
PALLD-204ENST00000503457 RSF1Q96T23 1441 aaPredicted RBP27.36■■□□□ 1.97
PALLD-204ENST00000503457 KIF21AQ7Z4S6 1674 aa27.32■■□□□ 1.96
PALLD-204ENST00000503457 MRC2Q9UBG0 1479 aa27.2■■□□□ 1.95
PALLD-204ENST00000503457 TOP2AP11388 1531 aaKnown RBP27.16■■□□□ 1.94
PALLD-204ENST00000503457 CFTRP13569 1480 aa27.13■■□□□ 1.93
PALLD-204ENST00000503457 CEP164Q9UPV0 1460 aa27.13■■□□□ 1.93
PALLD-204ENST00000503457 FANCD2Q9BXW9 1451 aa27.12■■□□□ 1.93
PALLD-204ENST00000503457 WDR62O43379 1518 aa27.08■■□□□ 1.93
PALLD-204ENST00000503457 CCDC88BA6NC98 1476 aa26.92■■□□□ 1.9
PALLD-204ENST00000503457 URB2Q14146 1524 aaKnown RBP26.85■■□□□ 1.89
PALLD-204ENST00000503457 PRDM2Q13029 1718 aa26.68■■□□□ 1.86
PALLD-204ENST00000503457 OSCARQ8IYS5 282 aa26.67■■□□□ 1.86
PALLD-204ENST00000503457 TRIM41Q8WV44 630 aa26.64■■□□□ 1.86
PALLD-204ENST00000503457 IFT140Q96RY7 1462 aa26.59■■□□□ 1.85
PALLD-204ENST00000503457 TOPBP1Q92547 1522 aa26.59■■□□□ 1.85
PALLD-204ENST00000503457 ABCC8Q09428 1581 aa26.58■■□□□ 1.85
PALLD-204ENST00000503457 ZNF608Q9ULD9 1512 aaPredicted RBP26.52■■□□□ 1.84
PALLD-204ENST00000503457 DNMBPQ6XZF7 1577 aa26.48■■□□□ 1.83
PALLD-204ENST00000503457 SUPT5HO00267 1087 aaKnown RBP26.37■■□□□ 1.81
PALLD-204ENST00000503457 AQRO60306 1485 aaKnown RBP eCLIP26.34■■□□□ 1.81
PALLD-204ENST00000503457 POLA1P09884 1462 aaPredicted RBP26.33■■□□□ 1.81
PALLD-204ENST00000503457 EIF4G3O43432 1585 aaKnown RBP26.31■■□□□ 1.8
PALLD-204ENST00000503457 TARBP1Q13395 1621 aaKnown RBP26.28■■□□□ 1.8
PALLD-204ENST00000503457 SOGA1O94964 1423 aa26.28■■□□□ 1.8
PALLD-204ENST00000503457 RAD54L2Q9Y4B4 1467 aa26.26■■□□□ 1.79
PALLD-204ENST00000503457 FBLN2P98095 1184 aa26.26■■□□□ 1.79
PALLD-204ENST00000503457 TDRD9Q8NDG6 1382 aaKnown RBP26.22■■□□□ 1.79
PALLD-204ENST00000503457 FGD5Q6ZNL6 1462 aa26.18■■□□□ 1.78
PALLD-204ENST00000503457 CUX1P39880 1505 aa26.16■■□□□ 1.78
PALLD-204ENST00000503457 RIMBP3CA6NJZ7 1639 aa26.14■■□□□ 1.77
PALLD-204ENST00000503457 RIMBP3BA6NNM3 1639 aa26.14■■□□□ 1.77
PALLD-204ENST00000503457 RIMBP3Q9UFD9 1639 aa26.14■■□□□ 1.77
PALLD-204ENST00000503457 ARHGEF11O15085 1522 aa26.1■■□□□ 1.77
PALLD-204ENST00000503457 CHMP7Q8WUX9 453 aaPredicted RBP26.06■■□□□ 1.76
PALLD-204ENST00000503457 CHD1O14646 1710 aa26.05■■□□□ 1.76
PALLD-204ENST00000503457 CYB5RLQ6IPT4 315 aa26.05■■□□□ 1.76
PALLD-204ENST00000503457 SNAPC4Q5SXM2 1469 aa26.04■■□□□ 1.76
PALLD-204ENST00000503457 WDR97A6NE52 1622 aa26.02■■□□□ 1.76
PALLD-204ENST00000503457 GRIN2BQ13224 1484 aa26■■□□□ 1.75
PALLD-204ENST00000503457 MAGI1Q96QZ7 1491 aaPredicted RBP25.97■■□□□ 1.75
PALLD-204ENST00000503457 GAPVD1Q14C86 1478 aa25.93■■□□□ 1.74
PALLD-204ENST00000503457 SYNJ2O15056 1496 aa25.89■■□□□ 1.73
PALLD-204ENST00000503457 ABCA10Q8WWZ4 1543 aa25.88■■□□□ 1.73
PALLD-204ENST00000503457 WRNQ14191 1432 aaPredicted RBP eCLIP25.87■■□□□ 1.73
PALLD-204ENST00000503457 ARAP1Q96P48 1450 aa25.85■■□□□ 1.73
PALLD-204ENST00000503457 SYNJ1O43426 1573 aa25.84■■□□□ 1.73
PALLD-204ENST00000503457 CLASP1Q7Z460 1538 aa25.81■■□□□ 1.72
PALLD-204ENST00000503457 ABCA5Q8WWZ7 1642 aa25.77■■□□□ 1.72
PALLD-204ENST00000503457 PBRM1Q86U86 1689 aa25.77■■□□□ 1.72
PALLD-204ENST00000503457 TRHP20396 242 aaPredicted RBP25.76■■□□□ 1.71
PALLD-204ENST00000503457 TOP2BQ02880 1626 aa25.74■■□□□ 1.71
PALLD-204ENST00000503457 BIVM-ERCC5R4GMW8 1640 aa25.7■■□□□ 1.71
PALLD-204ENST00000503457 GRIN2AQ12879 1464 aa25.64■■□□□ 1.69
PALLD-204ENST00000503457 FHAD1B1AJZ9 1412 aa25.61■■□□□ 1.69
PALLD-204ENST00000503457 ADAMTS12P58397 1594 aa25.58■■□□□ 1.69
PALLD-204ENST00000503457 ERICH3Q5RHP9 1530 aa25.55■■□□□ 1.68
PALLD-204ENST00000503457 NUP160Q12769 1436 aa25.54■■□□□ 1.68
PALLD-204ENST00000503457 CEP170Q5SW79 1584 aa25.5■■□□□ 1.67
PALLD-204ENST00000503457 ERCC6L2Q5T890 1561 aa25.44■■□□□ 1.66
PALLD-204ENST00000503457 JPH4Q96JJ6 628 aa25.4■■□□□ 1.66
PALLD-204ENST00000503457 PRG4Q92954 1404 aaPredicted RBP25.36■■□□□ 1.65
PALLD-204ENST00000503457 KIF27Q86VH2 1401 aa25.35■■□□□ 1.65
PALLD-204ENST00000503457 SHROOM2Q13796 1616 aa25.34■■□□□ 1.65
PALLD-204ENST00000503457 IGF1RP08069 1367 aa25.33■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms