RNA–Protein interactions for RNA: ENST00000503444.1

FAM13C-208, Transcript of family with sequence similarity 13 member C, human

TSL 4

Gene FAM13C, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FAM13C-208	ENST00000503444	NISCH	Q9Y2I1	1504 aa		45.61	■■■■■ 4.89
FAM13C-208	ENST00000503444	CCDC180	Q9P1Z9	1646 aa		40.64	■■■■■ 4.1
FAM13C-208	ENST00000503444	ABCC9	O60706	1549 aa		39.73	■■■■□ 3.95
FAM13C-208	ENST00000503444	RB1CC1	Q8TDY2	1594 aa		38.24	■■■■□ 3.71
FAM13C-208	ENST00000503444	NACAD	O15069	1562 aa		38.19	■■■■□ 3.7
FAM13C-208	ENST00000503444	DCAF8L2	P0C7V8	631 aa		38	■■■■□ 3.67
FAM13C-208	ENST00000503444	ZCCHC6	Q5VYS8	1495 aa	Known RBP	37.99	■■■■□ 3.67
FAM13C-208	ENST00000503444	MYO15B	Q96JP2	1530 aa		37.97	■■■■□ 3.67
FAM13C-208	ENST00000503444	DCAF1	Q9Y4B6	1507 aa		37.77	■■■■□ 3.64
FAM13C-208	ENST00000503444	UNC13A	Q9UPW8	1703 aa		37.44	■■■■□ 3.58
FAM13C-208	ENST00000503444	BICRA	Q9NZM4	1560 aa		37.1	■■■■□ 3.53
FAM13C-208	ENST00000503444	PABPN1	Q86U42	306 aa	Known RBP eCLIP	37.07	■■■■□ 3.52
FAM13C-208	ENST00000503444	SCRIB	Q14160	1630 aa		37	■■■■□ 3.51
FAM13C-208	ENST00000503444	SHROOM4	Q9ULL8	1493 aa		36.73	■■■■□ 3.47
FAM13C-208	ENST00000503444	DNAJC5B	Q9UF47	199 aa		36.52	■■■■□ 3.44
FAM13C-208	ENST00000503444	EIF4G1	Q04637	1599 aa	Known RBP	36.11	■■■■□ 3.37
FAM13C-208	ENST00000503444	CC2D2A	Q9P2K1	1620 aa		35.99	■■■■□ 3.35
FAM13C-208	ENST00000503444	CECR2	Q9BXF3	1484 aa		35.73	■■■■□ 3.31
FAM13C-208	ENST00000503444	SMARCA4	P51532	1647 aa		35.42	■■■■□ 3.26
FAM13C-208	ENST00000503444	BAZ1A	Q9NRL2	1556 aa	Predicted RBP	35.36	■■■■□ 3.25
FAM13C-208	ENST00000503444	NCAPD3	P42695	1498 aa		35.22	■■■■□ 3.23
FAM13C-208	ENST00000503444	ATAD2B	Q9ULI0	1458 aa		35.22	■■■■□ 3.23
FAM13C-208	ENST00000503444	SMARCA2	P51531	1590 aa		35.19	■■■■□ 3.22
FAM13C-208	ENST00000503444	MROH2B	Q7Z745	1585 aa		35.13	■■■■□ 3.21
FAM13C-208	ENST00000503444	PEG3	Q9GZU2	1588 aa		35.11	■■■■□ 3.21
FAM13C-208	ENST00000503444	HMGXB3	Q12766	1538 aa		35.07	■■■■□ 3.21
FAM13C-208	ENST00000503444	BAZ1B	Q9UIG0	1483 aa	Known RBP	34.92	■■■■□ 3.18
FAM13C-208	ENST00000503444	WIZ	O95785	1651 aa		34.77	■■■■□ 3.16
FAM13C-208	ENST00000503444	RSF1	Q96T23	1441 aa	Predicted RBP	34.7	■■■■□ 3.15
FAM13C-208	ENST00000503444	TOP2A	P11388	1531 aa	Known RBP	34.4	■■■■□ 3.1
FAM13C-208	ENST00000503444	NES	P48681	1621 aa		34.37	■■■■□ 3.09
FAM13C-208	ENST00000503444	LAMC3	Q9Y6N6	1575 aa		34.32	■■■■□ 3.09
FAM13C-208	ENST00000503444	ERCC6	Q03468	1493 aa		34.25	■■■■□ 3.07
FAM13C-208	ENST00000503444	CADPS	Q9ULU8	1353 aa		34.17	■■■■□ 3.06
FAM13C-208	ENST00000503444	PDS5B	Q9NTI5	1447 aa		34.05	■■■■□ 3.04
FAM13C-208	ENST00000503444	KIF21A	Q7Z4S6	1674 aa		34.03	■■■■□ 3.04
FAM13C-208	ENST00000503444	CFTR	P13569	1480 aa		33.98	■■■■□ 3.03
FAM13C-208	ENST00000503444	CCDC88B	A6NC98	1476 aa		33.97	■■■■□ 3.03
FAM13C-208	ENST00000503444	CUX2	O14529	1486 aa		33.96	■■■■□ 3.03
FAM13C-208	ENST00000503444	THOC2	Q8NI27	1593 aa	Known RBP	33.93	■■■■□ 3.02
FAM13C-208	ENST00000503444	PRDM2	Q13029	1718 aa		33.8	■■■■□ 3
FAM13C-208	ENST00000503444	FANCD2	Q9BXW9	1451 aa		33.78	■■■■□ 3
FAM13C-208	ENST00000503444	CEP164	Q9UPV0	1460 aa		33.75	■■■□□ 2.99
FAM13C-208	ENST00000503444	MRC2	Q9UBG0	1479 aa		33.72	■■■□□ 2.99
FAM13C-208	ENST00000503444	SUPT5H	O00267	1087 aa	Known RBP	33.68	■■■□□ 2.98
FAM13C-208	ENST00000503444	WDR62	O43379	1518 aa		33.64	■■■□□ 2.98
FAM13C-208	ENST00000503444	URB2	Q14146	1524 aa	Known RBP	33.46	■■■□□ 2.95
FAM13C-208	ENST00000503444	TOPBP1	Q92547	1522 aa		33.25	■■■□□ 2.91
FAM13C-208	ENST00000503444	ABCC8	Q09428	1581 aa		33.25	■■■□□ 2.91
FAM13C-208	ENST00000503444	DNMBP	Q6XZF7	1577 aa		33.21	■■■□□ 2.91
FAM13C-208	ENST00000503444	IFT140	Q96RY7	1462 aa		33.05	■■■□□ 2.88
FAM13C-208	ENST00000503444	CUX1	P39880	1505 aa		32.97	■■■□□ 2.87
FAM13C-208	ENST00000503444	DNAJC5	Q9H3Z4	198 aa		32.96	■■■□□ 2.87
FAM13C-208	ENST00000503444	POLA1	P09884	1462 aa	Predicted RBP	32.96	■■■□□ 2.87
FAM13C-208	ENST00000503444	TARBP1	Q13395	1621 aa	Known RBP	32.91	■■■□□ 2.86
FAM13C-208	ENST00000503444	ZNF608	Q9ULD9	1512 aa	Predicted RBP	32.9	■■■□□ 2.86
FAM13C-208	ENST00000503444	FGD5	Q6ZNL6	1462 aa		32.86	■■■□□ 2.85
FAM13C-208	ENST00000503444	EIF4G3	O43432	1585 aa	Known RBP	32.8	■■■□□ 2.84
FAM13C-208	ENST00000503444	RAD54L2	Q9Y4B4	1467 aa		32.8	■■■□□ 2.84
FAM13C-208	ENST00000503444	SOGA1	O94964	1423 aa		32.79	■■■□□ 2.84
FAM13C-208	ENST00000503444	WRN	Q14191	1432 aa	Predicted RBP eCLIP	32.71	■■■□□ 2.83
FAM13C-208	ENST00000503444	BIVM-ERCC5	R4GMW8	1640 aa		32.71	■■■□□ 2.83
FAM13C-208	ENST00000503444	TOP2B	Q02880	1626 aa		32.69	■■■□□ 2.82
FAM13C-208	ENST00000503444	AQR	O60306	1485 aa	Known RBP eCLIP	32.68	■■■□□ 2.82
FAM13C-208	ENST00000503444	WDR97	A6NE52	1622 aa		32.68	■■■□□ 2.82
FAM13C-208	ENST00000503444	SYNJ1	O43426	1573 aa		32.66	■■■□□ 2.82
FAM13C-208	ENST00000503444	TDRD9	Q8NDG6	1382 aa	Known RBP	32.6	■■■□□ 2.81
FAM13C-208	ENST00000503444	ABCA10	Q8WWZ4	1543 aa		32.56	■■■□□ 2.8
FAM13C-208	ENST00000503444	OSCAR	Q8IYS5	282 aa		32.48	■■■□□ 2.79
FAM13C-208	ENST00000503444	ABCA5	Q8WWZ7	1642 aa		32.46	■■■□□ 2.79
FAM13C-208	ENST00000503444	GRIN2B	Q13224	1484 aa		32.44	■■■□□ 2.78
FAM13C-208	ENST00000503444	GAPVD1	Q14C86	1478 aa		32.43	■■■□□ 2.78
FAM13C-208	ENST00000503444	PBRM1	Q86U86	1689 aa		32.42	■■■□□ 2.78
FAM13C-208	ENST00000503444	CHD1	O14646	1710 aa		32.42	■■■□□ 2.78
FAM13C-208	ENST00000503444	SNAPC4	Q5SXM2	1469 aa		32.4	■■■□□ 2.78
FAM13C-208	ENST00000503444	MAGI1	Q96QZ7	1491 aa	Predicted RBP	32.38	■■■□□ 2.77
FAM13C-208	ENST00000503444	FBLN2	P98095	1184 aa		32.25	■■■□□ 2.75
FAM13C-208	ENST00000503444	SYNJ2	O15056	1496 aa		32.24	■■■□□ 2.75
FAM13C-208	ENST00000503444	ERICH3	Q5RHP9	1530 aa		32.18	■■■□□ 2.74
FAM13C-208	ENST00000503444	CHMP7	Q8WUX9	453 aa	Predicted RBP	32.18	■■■□□ 2.74
FAM13C-208	ENST00000503444	ADAMTS12	P58397	1594 aa		32.14	■■■□□ 2.74
FAM13C-208	ENST00000503444	CLASP1	Q7Z460	1538 aa		32.05	■■■□□ 2.72
FAM13C-208	ENST00000503444	FHAD1	B1AJZ9	1412 aa		32.05	■■■□□ 2.72
FAM13C-208	ENST00000503444	KIF27	Q86VH2	1401 aa		32.03	■■■□□ 2.72
FAM13C-208	ENST00000503444	RIMBP3C	A6NJZ7	1639 aa		32.03	■■■□□ 2.72
FAM13C-208	ENST00000503444	RIMBP3B	A6NNM3	1639 aa		32.03	■■■□□ 2.72
FAM13C-208	ENST00000503444	RIMBP3	Q9UFD9	1639 aa		32.03	■■■□□ 2.72
FAM13C-208	ENST00000503444	GRIN2A	Q12879	1464 aa		32.03	■■■□□ 2.72
FAM13C-208	ENST00000503444	ARHGEF11	O15085	1522 aa		32	■■■□□ 2.71
FAM13C-208	ENST00000503444	IGF1R	P08069	1367 aa		31.91	■■■□□ 2.7
FAM13C-208	ENST00000503444	NUP160	Q12769	1436 aa		31.91	■■■□□ 2.7
FAM13C-208	ENST00000503444	CEP170	Q5SW79	1584 aa		31.89	■■■□□ 2.7
FAM13C-208	ENST00000503444	CUL7	Q14999	1698 aa		31.89	■■■□□ 2.7
FAM13C-208	ENST00000503444	TRIM41	Q8WV44	630 aa		31.83	■■■□□ 2.69
FAM13C-208	ENST00000503444	ARAP1	Q96P48	1450 aa		31.74	■■■□□ 2.67
FAM13C-208	ENST00000503444	CARMIL1	Q5VZK9	1371 aa		31.71	■■■□□ 2.67
FAM13C-208	ENST00000503444	RUSC2	Q8N2Y8	1516 aa		31.71	■■■□□ 2.67
FAM13C-208	ENST00000503444	SHROOM2	Q13796	1616 aa		31.7	■■■□□ 2.66
FAM13C-208	ENST00000503444	CYB5RL	Q6IPT4	315 aa		31.65	■■■□□ 2.66
FAM13C-208	ENST00000503444	ERCC6L2	Q5T890	1561 aa		31.58	■■■□□ 2.65

Retrieved 100 of 20,778 RNA–protein pairs in 86.2 ms