RNA–Protein interactions for RNA: ENST00000503420.5

CCHCR1-217, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 580 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-217ENST00000503420 NISCHQ9Y2I1 1504 aa53.67■■■■■ 6.18
CCHCR1-217ENST00000503420 CCDC180Q9P1Z9 1646 aa47.76■■■■■ 5.24
CCHCR1-217ENST00000503420 ABCC9O60706 1549 aa47.2■■■■■ 5.15
CCHCR1-217ENST00000503420 DCAF8L2P0C7V8 631 aa45.28■■■■■ 4.84
CCHCR1-217ENST00000503420 RB1CC1Q8TDY2 1594 aa45.23■■■■■ 4.83
CCHCR1-217ENST00000503420 NACADO15069 1562 aa45.08■■■■■ 4.81
CCHCR1-217ENST00000503420 MYO15BQ96JP2 1530 aa44.67■■■■■ 4.74
CCHCR1-217ENST00000503420 ZCCHC6Q5VYS8 1495 aaKnown RBP44.59■■■■■ 4.73
CCHCR1-217ENST00000503420 DCAF1Q9Y4B6 1507 aa44.34■■■■■ 4.69
CCHCR1-217ENST00000503420 PABPN1Q86U42 306 aaKnown RBP eCLIP44.15■■■■■ 4.66
CCHCR1-217ENST00000503420 UNC13AQ9UPW8 1703 aa44.01■■■■■ 4.64
CCHCR1-217ENST00000503420 BICRAQ9NZM4 1560 aa43.75■■■■■ 4.59
CCHCR1-217ENST00000503420 SCRIBQ14160 1630 aa43.62■■■■■ 4.57
CCHCR1-217ENST00000503420 DNAJC5BQ9UF47 199 aa43.62■■■■■ 4.57
CCHCR1-217ENST00000503420 SHROOM4Q9ULL8 1493 aa43.34■■■■■ 4.53
CCHCR1-217ENST00000503420 EIF4G1Q04637 1599 aaKnown RBP42.69■■■■■ 4.42
CCHCR1-217ENST00000503420 CC2D2AQ9P2K1 1620 aa42.6■■■■■ 4.41
CCHCR1-217ENST00000503420 CECR2Q9BXF3 1484 aa42.46■■■■■ 4.39
CCHCR1-217ENST00000503420 SMARCA4P51532 1647 aa41.66■■■■■ 4.26
CCHCR1-217ENST00000503420 BAZ1AQ9NRL2 1556 aaPredicted RBP41.63■■■■■ 4.26
CCHCR1-217ENST00000503420 NCAPD3P42695 1498 aa41.62■■■■■ 4.25
CCHCR1-217ENST00000503420 ATAD2BQ9ULI0 1458 aa41.59■■■■■ 4.25
CCHCR1-217ENST00000503420 SMARCA2P51531 1590 aa41.54■■■■■ 4.24
CCHCR1-217ENST00000503420 MROH2BQ7Z745 1585 aa41.33■■■■■ 4.21
CCHCR1-217ENST00000503420 HMGXB3Q12766 1538 aa41.33■■■■■ 4.21
CCHCR1-217ENST00000503420 BAZ1BQ9UIG0 1483 aaKnown RBP41.27■■■■■ 4.2
CCHCR1-217ENST00000503420 PEG3Q9GZU2 1588 aa41.23■■■■■ 4.19
CCHCR1-217ENST00000503420 WIZO95785 1651 aa40.85■■■■■ 4.13
CCHCR1-217ENST00000503420 RSF1Q96T23 1441 aaPredicted RBP40.79■■■■■ 4.12
CCHCR1-217ENST00000503420 ERCC6Q03468 1493 aa40.78■■■■■ 4.12
CCHCR1-217ENST00000503420 NESP48681 1621 aa40.69■■■■■ 4.1
CCHCR1-217ENST00000503420 LAMC3Q9Y6N6 1575 aa40.55■■■■■ 4.08
CCHCR1-217ENST00000503420 CADPSQ9ULU8 1353 aa40.46■■■■■ 4.07
CCHCR1-217ENST00000503420 TOP2AP11388 1531 aaKnown RBP40.42■■■■■ 4.06
CCHCR1-217ENST00000503420 PDS5BQ9NTI5 1447 aa40.42■■■■■ 4.06
CCHCR1-217ENST00000503420 CUX2O14529 1486 aa40.39■■■■■ 4.06
CCHCR1-217ENST00000503420 KIF21AQ7Z4S6 1674 aa40.11■■■■■ 4.01
CCHCR1-217ENST00000503420 CFTRP13569 1480 aa40.07■■■■■ 4.01
CCHCR1-217ENST00000503420 THOC2Q8NI27 1593 aaKnown RBP40.05■■■■■ 4
CCHCR1-217ENST00000503420 CCDC88BA6NC98 1476 aa40■■■■□ 3.99
CCHCR1-217ENST00000503420 FANCD2Q9BXW9 1451 aa39.95■■■■□ 3.99
CCHCR1-217ENST00000503420 MRC2Q9UBG0 1479 aa39.94■■■■□ 3.98
CCHCR1-217ENST00000503420 CEP164Q9UPV0 1460 aa39.94■■■■□ 3.98
CCHCR1-217ENST00000503420 WDR62O43379 1518 aa39.74■■■■□ 3.95
CCHCR1-217ENST00000503420 SUPT5HO00267 1087 aaKnown RBP39.71■■■■□ 3.95
CCHCR1-217ENST00000503420 DNAJC5Q9H3Z4 198 aa39.62■■■■□ 3.93
CCHCR1-217ENST00000503420 PRDM2Q13029 1718 aa39.6■■■■□ 3.93
CCHCR1-217ENST00000503420 URB2Q14146 1524 aaKnown RBP39.5■■■■□ 3.91
CCHCR1-217ENST00000503420 ABCC8Q09428 1581 aa39.3■■■■□ 3.88
CCHCR1-217ENST00000503420 TOPBP1Q92547 1522 aa39.24■■■■□ 3.87
CCHCR1-217ENST00000503420 DNMBPQ6XZF7 1577 aa39.15■■■■□ 3.86
CCHCR1-217ENST00000503420 IFT140Q96RY7 1462 aa39.12■■■■□ 3.85
CCHCR1-217ENST00000503420 ZNF608Q9ULD9 1512 aaPredicted RBP38.92■■■■□ 3.82
CCHCR1-217ENST00000503420 POLA1P09884 1462 aaPredicted RBP38.88■■■■□ 3.81
CCHCR1-217ENST00000503420 SOGA1O94964 1423 aa38.82■■■■□ 3.81
CCHCR1-217ENST00000503420 OSCARQ8IYS5 282 aa38.82■■■■□ 3.8
CCHCR1-217ENST00000503420 CUX1P39880 1505 aa38.79■■■■□ 3.8
CCHCR1-217ENST00000503420 TARBP1Q13395 1621 aaKnown RBP38.76■■■■□ 3.8
CCHCR1-217ENST00000503420 FGD5Q6ZNL6 1462 aa38.75■■■■□ 3.79
CCHCR1-217ENST00000503420 RAD54L2Q9Y4B4 1467 aa38.75■■■■□ 3.79
CCHCR1-217ENST00000503420 AQRO60306 1485 aaKnown RBP eCLIP38.73■■■■□ 3.792e-10■■■■■ 47.9
CCHCR1-217ENST00000503420 EIF4G3O43432 1585 aaKnown RBP38.7■■■■□ 3.79
CCHCR1-217ENST00000503420 TDRD9Q8NDG6 1382 aaKnown RBP38.64■■■■□ 3.78
CCHCR1-217ENST00000503420 WRNQ14191 1432 aaPredicted RBP eCLIP38.52■■■■□ 3.76
CCHCR1-217ENST00000503420 FBLN2P98095 1184 aa38.5■■■■□ 3.75
CCHCR1-217ENST00000503420 WDR97A6NE52 1622 aa38.48■■■■□ 3.75
CCHCR1-217ENST00000503420 GRIN2BQ13224 1484 aa38.37■■■■□ 3.73
CCHCR1-217ENST00000503420 TOP2BQ02880 1626 aa38.37■■■■□ 3.73
CCHCR1-217ENST00000503420 ABCA10Q8WWZ4 1543 aa38.36■■■■□ 3.73
CCHCR1-217ENST00000503420 GAPVD1Q14C86 1478 aa38.33■■■■□ 3.73
CCHCR1-217ENST00000503420 CHMP7Q8WUX9 453 aaPredicted RBP38.32■■■■□ 3.72
CCHCR1-217ENST00000503420 SNAPC4Q5SXM2 1469 aa38.32■■■■□ 3.72
CCHCR1-217ENST00000503420 SYNJ1O43426 1573 aa38.31■■■■□ 3.72
CCHCR1-217ENST00000503420 BIVM-ERCC5R4GMW8 1640 aa38.31■■■■□ 3.72
CCHCR1-217ENST00000503420 MAGI1Q96QZ7 1491 aaPredicted RBP38.28■■■■□ 3.72
CCHCR1-217ENST00000503420 TRIM41Q8WV44 630 aa38.27■■■■□ 3.72
CCHCR1-217ENST00000503420 CHD1O14646 1710 aa38.25■■■■□ 3.71
CCHCR1-217ENST00000503420 ABCA5Q8WWZ7 1642 aa38.15■■■■□ 3.7
CCHCR1-217ENST00000503420 SYNJ2O15056 1496 aa38.13■■■■□ 3.69
CCHCR1-217ENST00000503420 PBRM1Q86U86 1689 aa38.12■■■■□ 3.69
CCHCR1-217ENST00000503420 RIMBP3CA6NJZ7 1639 aa38.01■■■■□ 3.67
CCHCR1-217ENST00000503420 RIMBP3BA6NNM3 1639 aa38.01■■■■□ 3.67
CCHCR1-217ENST00000503420 RIMBP3Q9UFD9 1639 aa38.01■■■■□ 3.67
CCHCR1-217ENST00000503420 ARHGEF11O15085 1522 aa38■■■■□ 3.67
CCHCR1-217ENST00000503420 ERICH3Q5RHP9 1530 aa37.89■■■■□ 3.66
CCHCR1-217ENST00000503420 FHAD1B1AJZ9 1412 aa37.88■■■■□ 3.66
CCHCR1-217ENST00000503420 CYB5RLQ6IPT4 315 aa37.86■■■■□ 3.65
CCHCR1-217ENST00000503420 CLASP1Q7Z460 1538 aa37.85■■■■□ 3.65
CCHCR1-217ENST00000503420 GRIN2AQ12879 1464 aa37.84■■■■□ 3.65
CCHCR1-217ENST00000503420 ADAMTS12P58397 1594 aa37.83■■■■□ 3.65
CCHCR1-217ENST00000503420 KIF27Q86VH2 1401 aa37.78■■■■□ 3.64
CCHCR1-217ENST00000503420 NUP160Q12769 1436 aa37.66■■■■□ 3.62
CCHCR1-217ENST00000503420 ARAP1Q96P48 1450 aa37.65■■■■□ 3.62
CCHCR1-217ENST00000503420 IGF1RP08069 1367 aa37.64■■■■□ 3.62
CCHCR1-217ENST00000503420 CEP170Q5SW79 1584 aa37.59■■■■□ 3.61
CCHCR1-217ENST00000503420 CUL7Q14999 1698 aa37.46■■■■□ 3.59
CCHCR1-217ENST00000503420 CARMIL1Q5VZK9 1371 aa37.45■■■■□ 3.59
CCHCR1-217ENST00000503420 JPH4Q96JJ6 628 aa37.43■■■■□ 3.58
CCHCR1-217ENST00000503420 SHROOM2Q13796 1616 aa37.33■■■■□ 3.57
CCHCR1-217ENST00000503420 PRG4Q92954 1404 aaPredicted RBP37.32■■■■□ 3.56
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms