RNA–Protein interactions for RNA: ENST00000503363.1

PLXNA1-203, Transcript of plexin A1, humanhuman

TSL 3

Gene PLXNA1, Length 410 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLXNA1-203ENST00000503363 NISCHQ9Y2I1 1504 aa35.13■■■■□ 3.21
PLXNA1-203ENST00000503363 CCDC180Q9P1Z9 1646 aa31.35■■■□□ 2.61
PLXNA1-203ENST00000503363 ABCC9O60706 1549 aa30.98■■■□□ 2.55
PLXNA1-203ENST00000503363 RB1CC1Q8TDY2 1594 aa29.68■■■□□ 2.34
PLXNA1-203ENST00000503363 NACADO15069 1562 aa29.57■■■□□ 2.32
PLXNA1-203ENST00000503363 DCAF8L2P0C7V8 631 aa29.55■■■□□ 2.32
PLXNA1-203ENST00000503363 MYO15BQ96JP2 1530 aa29.29■■■□□ 2.28
PLXNA1-203ENST00000503363 ZCCHC6Q5VYS8 1495 aaKnown RBP29.18■■■□□ 2.26
PLXNA1-203ENST00000503363 DCAF1Q9Y4B6 1507 aa29.04■■■□□ 2.24
PLXNA1-203ENST00000503363 UNC13AQ9UPW8 1703 aa28.99■■■□□ 2.23
PLXNA1-203ENST00000503363 PABPN1Q86U42 306 aaKnown RBP eCLIP28.94■■■□□ 2.22
PLXNA1-203ENST00000503363 BICRAQ9NZM4 1560 aa28.76■■■□□ 2.19
PLXNA1-203ENST00000503363 DNAJC5BQ9UF47 199 aa28.74■■■□□ 2.19
PLXNA1-203ENST00000503363 SCRIBQ14160 1630 aa28.58■■■□□ 2.17
PLXNA1-203ENST00000503363 SHROOM4Q9ULL8 1493 aa28.44■■■□□ 2.14
PLXNA1-203ENST00000503363 EIF4G1Q04637 1599 aaKnown RBP28.03■■■□□ 2.08
PLXNA1-203ENST00000503363 CC2D2AQ9P2K1 1620 aa28.01■■■□□ 2.07
PLXNA1-203ENST00000503363 CECR2Q9BXF3 1484 aa27.89■■■□□ 2.05
PLXNA1-203ENST00000503363 SMARCA4P51532 1647 aa27.32■■□□□ 1.96
PLXNA1-203ENST00000503363 NCAPD3P42695 1498 aa27.3■■□□□ 1.96
PLXNA1-203ENST00000503363 ATAD2BQ9ULI0 1458 aa27.25■■□□□ 1.95
PLXNA1-203ENST00000503363 BAZ1AQ9NRL2 1556 aaPredicted RBP27.25■■□□□ 1.95
PLXNA1-203ENST00000503363 SMARCA2P51531 1590 aa27.22■■□□□ 1.95
PLXNA1-203ENST00000503363 HMGXB3Q12766 1538 aa27.11■■□□□ 1.93
PLXNA1-203ENST00000503363 MROH2BQ7Z745 1585 aa27.06■■□□□ 1.92
PLXNA1-203ENST00000503363 PEG3Q9GZU2 1588 aa27.05■■□□□ 1.92
PLXNA1-203ENST00000503363 BAZ1BQ9UIG0 1483 aaKnown RBP27.01■■□□□ 1.91
PLXNA1-203ENST00000503363 WIZO95785 1651 aa26.76■■□□□ 1.87
PLXNA1-203ENST00000503363 ERCC6Q03468 1493 aa26.74■■□□□ 1.87
PLXNA1-203ENST00000503363 NESP48681 1621 aa26.72■■□□□ 1.87
PLXNA1-203ENST00000503363 RSF1Q96T23 1441 aaPredicted RBP26.65■■□□□ 1.86
PLXNA1-203ENST00000503363 LAMC3Q9Y6N6 1575 aa26.61■■□□□ 1.85
PLXNA1-203ENST00000503363 CUX2O14529 1486 aa26.56■■□□□ 1.84
PLXNA1-203ENST00000503363 CADPSQ9ULU8 1353 aa26.49■■□□□ 1.83
PLXNA1-203ENST00000503363 PDS5BQ9NTI5 1447 aa26.47■■□□□ 1.83
PLXNA1-203ENST00000503363 TOP2AP11388 1531 aaKnown RBP26.45■■□□□ 1.83
PLXNA1-203ENST00000503363 KIF21AQ7Z4S6 1674 aa26.39■■□□□ 1.82
PLXNA1-203ENST00000503363 THOC2Q8NI27 1593 aaKnown RBP26.36■■□□□ 1.81
PLXNA1-203ENST00000503363 CFTRP13569 1480 aa26.25■■□□□ 1.79
PLXNA1-203ENST00000503363 MRC2Q9UBG0 1479 aa26.19■■□□□ 1.78
PLXNA1-203ENST00000503363 FANCD2Q9BXW9 1451 aa26.17■■□□□ 1.78
PLXNA1-203ENST00000503363 CCDC88BA6NC98 1476 aa26.17■■□□□ 1.78
PLXNA1-203ENST00000503363 CEP164Q9UPV0 1460 aa26.17■■□□□ 1.78
PLXNA1-203ENST00000503363 DNAJC5Q9H3Z4 198 aa26.14■■□□□ 1.78
PLXNA1-203ENST00000503363 WDR62O43379 1518 aa26.1■■□□□ 1.77
PLXNA1-203ENST00000503363 PRDM2Q13029 1718 aa26.02■■□□□ 1.76
PLXNA1-203ENST00000503363 URB2Q14146 1524 aaKnown RBP25.92■■□□□ 1.74
PLXNA1-203ENST00000503363 SUPT5HO00267 1087 aaKnown RBP25.81■■□□□ 1.72
PLXNA1-203ENST00000503363 ABCC8Q09428 1581 aa25.73■■□□□ 1.71
PLXNA1-203ENST00000503363 TOPBP1Q92547 1522 aa25.72■■□□□ 1.71
PLXNA1-203ENST00000503363 DNMBPQ6XZF7 1577 aa25.65■■□□□ 1.7
PLXNA1-203ENST00000503363 IFT140Q96RY7 1462 aa25.65■■□□□ 1.7
PLXNA1-203ENST00000503363 ZNF608Q9ULD9 1512 aaPredicted RBP25.53■■□□□ 1.68
PLXNA1-203ENST00000503363 POLA1P09884 1462 aaPredicted RBP25.47■■□□□ 1.67
PLXNA1-203ENST00000503363 OSCARQ8IYS5 282 aa25.46■■□□□ 1.67
PLXNA1-203ENST00000503363 TARBP1Q13395 1621 aaKnown RBP25.45■■□□□ 1.66
PLXNA1-203ENST00000503363 EIF4G3O43432 1585 aaKnown RBP25.4■■□□□ 1.66
PLXNA1-203ENST00000503363 SOGA1O94964 1423 aa25.4■■□□□ 1.66
PLXNA1-203ENST00000503363 CUX1P39880 1505 aa25.4■■□□□ 1.66
PLXNA1-203ENST00000503363 AQRO60306 1485 aaKnown RBP eCLIP25.38■■□□□ 1.65
PLXNA1-203ENST00000503363 FGD5Q6ZNL6 1462 aa25.38■■□□□ 1.65
PLXNA1-203ENST00000503363 RAD54L2Q9Y4B4 1467 aa25.38■■□□□ 1.65
PLXNA1-203ENST00000503363 TDRD9Q8NDG6 1382 aaKnown RBP25.29■■□□□ 1.64
PLXNA1-203ENST00000503363 WDR97A6NE52 1622 aa25.23■■□□□ 1.63
PLXNA1-203ENST00000503363 FBLN2P98095 1184 aa25.17■■□□□ 1.62
PLXNA1-203ENST00000503363 CHD1O14646 1710 aa25.17■■□□□ 1.62
PLXNA1-203ENST00000503363 WRNQ14191 1432 aaPredicted RBP eCLIP25.15■■□□□ 1.62
PLXNA1-203ENST00000503363 TRIM41Q8WV44 630 aa25.15■■□□□ 1.62
PLXNA1-203ENST00000503363 GRIN2BQ13224 1484 aa25.12■■□□□ 1.61
PLXNA1-203ENST00000503363 ABCA10Q8WWZ4 1543 aa25.12■■□□□ 1.61
PLXNA1-203ENST00000503363 SNAPC4Q5SXM2 1469 aa25.11■■□□□ 1.61
PLXNA1-203ENST00000503363 TOP2BQ02880 1626 aa25.11■■□□□ 1.61
PLXNA1-203ENST00000503363 BIVM-ERCC5R4GMW8 1640 aa25.11■■□□□ 1.61
PLXNA1-203ENST00000503363 GAPVD1Q14C86 1478 aa25.09■■□□□ 1.61
PLXNA1-203ENST00000503363 MAGI1Q96QZ7 1491 aaPredicted RBP25.08■■□□□ 1.6
PLXNA1-203ENST00000503363 SYNJ1O43426 1573 aa25.07■■□□□ 1.6
PLXNA1-203ENST00000503363 CHMP7Q8WUX9 453 aaPredicted RBP25.05■■□□□ 1.6
PLXNA1-203ENST00000503363 RIMBP3CA6NJZ7 1639 aa25.03■■□□□ 1.6
PLXNA1-203ENST00000503363 RIMBP3BA6NNM3 1639 aa25.03■■□□□ 1.6
PLXNA1-203ENST00000503363 RIMBP3Q9UFD9 1639 aa25.03■■□□□ 1.6
PLXNA1-203ENST00000503363 PBRM1Q86U86 1689 aa25.03■■□□□ 1.6
PLXNA1-203ENST00000503363 ABCA5Q8WWZ7 1642 aa25.02■■□□□ 1.6
PLXNA1-203ENST00000503363 SYNJ2O15056 1496 aa24.99■■□□□ 1.59
PLXNA1-203ENST00000503363 ARHGEF11O15085 1522 aa24.98■■□□□ 1.59
PLXNA1-203ENST00000503363 CLASP1Q7Z460 1538 aa24.87■■□□□ 1.57
PLXNA1-203ENST00000503363 CYB5RLQ6IPT4 315 aa24.83■■□□□ 1.57
PLXNA1-203ENST00000503363 ERICH3Q5RHP9 1530 aa24.81■■□□□ 1.56
PLXNA1-203ENST00000503363 ADAMTS12P58397 1594 aa24.8■■□□□ 1.56
PLXNA1-203ENST00000503363 FHAD1B1AJZ9 1412 aa24.78■■□□□ 1.56
PLXNA1-203ENST00000503363 GRIN2AQ12879 1464 aa24.78■■□□□ 1.56
PLXNA1-203ENST00000503363 ARAP1Q96P48 1450 aa24.76■■□□□ 1.55
PLXNA1-203ENST00000503363 NUP160Q12769 1436 aa24.69■■□□□ 1.54
PLXNA1-203ENST00000503363 CEP170Q5SW79 1584 aa24.67■■□□□ 1.54
PLXNA1-203ENST00000503363 KIF27Q86VH2 1401 aa24.66■■□□□ 1.54
PLXNA1-203ENST00000503363 IGF1RP08069 1367 aa24.6■■□□□ 1.53
PLXNA1-203ENST00000503363 SHROOM2Q13796 1616 aa24.53■■□□□ 1.52
PLXNA1-203ENST00000503363 CUL7Q14999 1698 aa24.53■■□□□ 1.52
PLXNA1-203ENST00000503363 ERCC6L2Q5T890 1561 aa24.5■■□□□ 1.51
PLXNA1-203ENST00000503363 JPH4Q96JJ6 628 aa24.48■■□□□ 1.51
PLXNA1-203ENST00000503363 CARMIL1Q5VZK9 1371 aa24.45■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms