RNA–Protein interactions for RNA: ENST00000503304.1

ABCC3-204, Transcript of ATP binding cassette subfamily C member 3, humanhuman

TSL 5

Gene ABCC3, Length 542 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCC3-204ENST00000503304 NISCHQ9Y2I1 1504 aa43.29■■■■■ 4.52
ABCC3-204ENST00000503304 ABCC9O60706 1549 aa39.57■■■■□ 3.93
ABCC3-204ENST00000503304 CCDC180Q9P1Z9 1646 aa39.1■■■■□ 3.85
ABCC3-204ENST00000503304 DNAJC5BQ9UF47 199 aa37.58■■■■□ 3.61
ABCC3-204ENST00000503304 RB1CC1Q8TDY2 1594 aa37.42■■■■□ 3.58
ABCC3-204ENST00000503304 NACADO15069 1562 aa37.04■■■■□ 3.52
ABCC3-204ENST00000503304 PABPN1Q86U42 306 aaKnown RBP eCLIP36.71■■■■□ 3.47
ABCC3-204ENST00000503304 UNC13AQ9UPW8 1703 aa36.68■■■■□ 3.46
ABCC3-204ENST00000503304 DCAF8L2P0C7V8 631 aa36.61■■■■□ 3.45
ABCC3-204ENST00000503304 BICRAQ9NZM4 1560 aa36.44■■■■□ 3.42
ABCC3-204ENST00000503304 MYO15BQ96JP2 1530 aa36.37■■■■□ 3.41
ABCC3-204ENST00000503304 SHROOM4Q9ULL8 1493 aa35.81■■■■□ 3.32
ABCC3-204ENST00000503304 ZCCHC6Q5VYS8 1495 aaKnown RBP35.8■■■■□ 3.32
ABCC3-204ENST00000503304 CC2D2AQ9P2K1 1620 aa35.75■■■■□ 3.31
ABCC3-204ENST00000503304 DCAF1Q9Y4B6 1507 aa35.72■■■■□ 3.31
ABCC3-204ENST00000503304 CECR2Q9BXF3 1484 aa35.69■■■■□ 3.3
ABCC3-204ENST00000503304 SCRIBQ14160 1630 aa35.61■■■■□ 3.29
ABCC3-204ENST00000503304 EIF4G1Q04637 1599 aaKnown RBP35.55■■■■□ 3.28
ABCC3-204ENST00000503304 DNAJC5Q9H3Z4 198 aa34.82■■■■□ 3.16
ABCC3-204ENST00000503304 CUX2O14529 1486 aa34.3■■■■□ 3.08
ABCC3-204ENST00000503304 NCAPD3P42695 1498 aa34.2■■■■□ 3.06
ABCC3-204ENST00000503304 ERCC6Q03468 1493 aa34.16■■■■□ 3.06
ABCC3-204ENST00000503304 ATAD2BQ9ULI0 1458 aa34.04■■■■□ 3.04
ABCC3-204ENST00000503304 HMGXB3Q12766 1538 aa33.94■■■■□ 3.02
ABCC3-204ENST00000503304 SMARCA4P51532 1647 aa33.91■■■■□ 3.02
ABCC3-204ENST00000503304 SMARCA2P51531 1590 aa33.89■■■■□ 3.02
ABCC3-204ENST00000503304 NESP48681 1621 aa33.88■■■■□ 3.01
ABCC3-204ENST00000503304 THOC2Q8NI27 1593 aaKnown RBP33.68■■■□□ 2.98
ABCC3-204ENST00000503304 BAZ1BQ9UIG0 1483 aaKnown RBP33.67■■■□□ 2.98
ABCC3-204ENST00000503304 BAZ1AQ9NRL2 1556 aaPredicted RBP33.62■■■□□ 2.97
ABCC3-204ENST00000503304 PEG3Q9GZU2 1588 aa33.58■■■□□ 2.97
ABCC3-204ENST00000503304 LAMC3Q9Y6N6 1575 aa33.52■■■□□ 2.96
ABCC3-204ENST00000503304 KIF21AQ7Z4S6 1674 aa33.45■■■□□ 2.95
ABCC3-204ENST00000503304 MROH2BQ7Z745 1585 aa33.38■■■□□ 2.93
ABCC3-204ENST00000503304 PDS5BQ9NTI5 1447 aa33.29■■■□□ 2.92
ABCC3-204ENST00000503304 CADPSQ9ULU8 1353 aa33.1■■■□□ 2.89
ABCC3-204ENST00000503304 MRC2Q9UBG0 1479 aa33.1■■■□□ 2.89
ABCC3-204ENST00000503304 WDR62O43379 1518 aa33.07■■■□□ 2.88
ABCC3-204ENST00000503304 TRIM41Q8WV44 630 aa33.06■■■□□ 2.88
ABCC3-204ENST00000503304 WIZO95785 1651 aa32.96■■■□□ 2.87
ABCC3-204ENST00000503304 CEP164Q9UPV0 1460 aa32.85■■■□□ 2.85
ABCC3-204ENST00000503304 FANCD2Q9BXW9 1451 aa32.77■■■□□ 2.84
ABCC3-204ENST00000503304 CFTRP13569 1480 aa32.67■■■□□ 2.82
ABCC3-204ENST00000503304 URB2Q14146 1524 aaKnown RBP32.57■■■□□ 2.8
ABCC3-204ENST00000503304 OSCARQ8IYS5 282 aa32.55■■■□□ 2.8
ABCC3-204ENST00000503304 TOP2AP11388 1531 aaKnown RBP32.49■■■□□ 2.79
ABCC3-204ENST00000503304 RSF1Q96T23 1441 aaPredicted RBP32.46■■■□□ 2.79
ABCC3-204ENST00000503304 PRDM2Q13029 1718 aa32.34■■■□□ 2.77
ABCC3-204ENST00000503304 RIMBP3CA6NJZ7 1639 aa32.33■■■□□ 2.77
ABCC3-204ENST00000503304 RIMBP3BA6NNM3 1639 aa32.33■■■□□ 2.77
ABCC3-204ENST00000503304 RIMBP3Q9UFD9 1639 aa32.33■■■□□ 2.77
ABCC3-204ENST00000503304 ZNF608Q9ULD9 1512 aaPredicted RBP32.26■■■□□ 2.75
ABCC3-204ENST00000503304 IFT140Q96RY7 1462 aa32.19■■■□□ 2.74
ABCC3-204ENST00000503304 ARHGEF11O15085 1522 aa32.16■■■□□ 2.74
ABCC3-204ENST00000503304 TOPBP1Q92547 1522 aa32.1■■■□□ 2.73
ABCC3-204ENST00000503304 CCDC88BA6NC98 1476 aa32.1■■■□□ 2.73
ABCC3-204ENST00000503304 EIF4G3O43432 1585 aaKnown RBP32.07■■■□□ 2.72
ABCC3-204ENST00000503304 DNMBPQ6XZF7 1577 aa31.95■■■□□ 2.71
ABCC3-204ENST00000503304 CHD1O14646 1710 aa31.93■■■□□ 2.7
ABCC3-204ENST00000503304 ABCC8Q09428 1581 aa31.92■■■□□ 2.7
ABCC3-204ENST00000503304 TARBP1Q13395 1621 aaKnown RBP31.9■■■□□ 2.7
ABCC3-204ENST00000503304 AQRO60306 1485 aaKnown RBP eCLIP31.85■■■□□ 2.69
ABCC3-204ENST00000503304 CYB5RLQ6IPT4 315 aa31.85■■■□□ 2.69
ABCC3-204ENST00000503304 ARAP1Q96P48 1450 aa31.83■■■□□ 2.69
ABCC3-204ENST00000503304 POLA1P09884 1462 aaPredicted RBP31.75■■■□□ 2.67
ABCC3-204ENST00000503304 FBLN2P98095 1184 aa31.65■■■□□ 2.66
ABCC3-204ENST00000503304 RAD54L2Q9Y4B4 1467 aa31.64■■■□□ 2.66
ABCC3-204ENST00000503304 TRHP20396 242 aaPredicted RBP31.63■■■□□ 2.65
ABCC3-204ENST00000503304 TDRD9Q8NDG6 1382 aaKnown RBP31.56■■■□□ 2.64
ABCC3-204ENST00000503304 CLASP1Q7Z460 1538 aa31.55■■■□□ 2.64
ABCC3-204ENST00000503304 SNAPC4Q5SXM2 1469 aa31.53■■■□□ 2.64
ABCC3-204ENST00000503304 SOGA1O94964 1423 aa31.53■■■□□ 2.64
ABCC3-204ENST00000503304 WDR97A6NE52 1622 aa31.49■■■□□ 2.63
ABCC3-204ENST00000503304 FGD5Q6ZNL6 1462 aa31.47■■■□□ 2.63
ABCC3-204ENST00000503304 SYNJ1O43426 1573 aa31.42■■■□□ 2.62
ABCC3-204ENST00000503304 MAGI1Q96QZ7 1491 aaPredicted RBP31.4■■■□□ 2.62
ABCC3-204ENST00000503304 CUX1P39880 1505 aa31.39■■■□□ 2.62
ABCC3-204ENST00000503304 GRIN2BQ13224 1484 aa31.34■■■□□ 2.61
ABCC3-204ENST00000503304 CHMP7Q8WUX9 453 aaPredicted RBP31.33■■■□□ 2.61
ABCC3-204ENST00000503304 SYNJ2O15056 1496 aa31.32■■■□□ 2.6
ABCC3-204ENST00000503304 PBRM1Q86U86 1689 aa31.26■■■□□ 2.6
ABCC3-204ENST00000503304 GAPVD1Q14C86 1478 aa31.19■■■□□ 2.58
ABCC3-204ENST00000503304 ABCA5Q8WWZ7 1642 aa31.13■■■□□ 2.57
ABCC3-204ENST00000503304 ABCA10Q8WWZ4 1543 aa31.08■■■□□ 2.57
ABCC3-204ENST00000503304 AEBP2Q6ZN18 517 aaPredicted RBP31.05■■■□□ 2.56
ABCC3-204ENST00000503304 ERCC6L2Q5T890 1561 aa31.05■■■□□ 2.56
ABCC3-204ENST00000503304 GRIN2AQ12879 1464 aa30.97■■■□□ 2.55
ABCC3-204ENST00000503304 ADAMTS12P58397 1594 aa30.93■■■□□ 2.54
ABCC3-204ENST00000503304 CEP170Q5SW79 1584 aa30.93■■■□□ 2.54
ABCC3-204ENST00000503304 NUP160Q12769 1436 aa30.9■■■□□ 2.54
ABCC3-204ENST00000503304 SHROOM2Q13796 1616 aa30.85■■■□□ 2.53
ABCC3-204ENST00000503304 WRNQ14191 1432 aaPredicted RBP eCLIP30.81■■■□□ 2.52
ABCC3-204ENST00000503304 BIVM-ERCC5R4GMW8 1640 aa30.76■■■□□ 2.51
ABCC3-204ENST00000503304 FHAD1B1AJZ9 1412 aa30.73■■■□□ 2.51
ABCC3-204ENST00000503304 TOP2BQ02880 1626 aa30.73■■■□□ 2.51
ABCC3-204ENST00000503304 KIF13AQ9H1H9 1805 aa30.73■■■□□ 2.51
ABCC3-204ENST00000503304 ERICH3Q5RHP9 1530 aa30.67■■■□□ 2.5
ABCC3-204ENST00000503304 PRG4Q92954 1404 aaPredicted RBP30.6■■■□□ 2.49
ABCC3-204ENST00000503304 SUPT5HO00267 1087 aaKnown RBP30.54■■■□□ 2.48
ABCC3-204ENST00000503304 RUSC2Q8N2Y8 1516 aa30.52■■■□□ 2.48
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms