RNA–Protein interactions for RNA: ENST00000503287.5

TMEM173-204, Transcript of transmembrane protein 173, humanhuman

TSL 3

Gene TMEM173, Length 948 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM173-204ENST00000503287 NISCHQ9Y2I1 1504 aa37.59■■■■□ 3.61
TMEM173-204ENST00000503287 CCDC180Q9P1Z9 1646 aa33.62■■■□□ 2.97
TMEM173-204ENST00000503287 ABCC9O60706 1549 aa33.49■■■□□ 2.95
TMEM173-204ENST00000503287 RB1CC1Q8TDY2 1594 aa31.98■■■□□ 2.71
TMEM173-204ENST00000503287 NACADO15069 1562 aa31.83■■■□□ 2.69
TMEM173-204ENST00000503287 DCAF8L2P0C7V8 631 aa31.67■■■□□ 2.66
TMEM173-204ENST00000503287 MYO15BQ96JP2 1530 aa31.5■■■□□ 2.63
TMEM173-204ENST00000503287 DNAJC5BQ9UF47 199 aa31.47■■■□□ 2.63
TMEM173-204ENST00000503287 PABPN1Q86U42 306 aaKnown RBP eCLIP31.27■■■□□ 2.6
TMEM173-204ENST00000503287 UNC13AQ9UPW8 1703 aa31.19■■■□□ 2.58
TMEM173-204ENST00000503287 ZCCHC6Q5VYS8 1495 aaKnown RBP31.13■■■□□ 2.57
TMEM173-204ENST00000503287 DCAF1Q9Y4B6 1507 aa31.12■■■□□ 2.57
TMEM173-204ENST00000503287 BICRAQ9NZM4 1560 aa31.04■■■□□ 2.56
TMEM173-204ENST00000503287 SHROOM4Q9ULL8 1493 aa30.7■■■□□ 2.5
TMEM173-204ENST00000503287 SCRIBQ14160 1630 aa30.55■■■□□ 2.48
TMEM173-204ENST00000503287 CC2D2AQ9P2K1 1620 aa30.28■■■□□ 2.44
TMEM173-204ENST00000503287 EIF4G1Q04637 1599 aaKnown RBP30.25■■■□□ 2.43
TMEM173-204ENST00000503287 CECR2Q9BXF3 1484 aa30.2■■■□□ 2.43
TMEM173-204ENST00000503287 NCAPD3P42695 1498 aa29.44■■■□□ 2.3
TMEM173-204ENST00000503287 ATAD2BQ9ULI0 1458 aa29.3■■■□□ 2.28
TMEM173-204ENST00000503287 SMARCA4P51532 1647 aa29.23■■■□□ 2.27
TMEM173-204ENST00000503287 SMARCA2P51531 1590 aa29.2■■■□□ 2.26
TMEM173-204ENST00000503287 BAZ1AQ9NRL2 1556 aaPredicted RBP29.15■■■□□ 2.26
TMEM173-204ENST00000503287 HMGXB3Q12766 1538 aa29.14■■■□□ 2.25
TMEM173-204ENST00000503287 PEG3Q9GZU2 1588 aa29.03■■■□□ 2.24
TMEM173-204ENST00000503287 BAZ1BQ9UIG0 1483 aaKnown RBP28.97■■■□□ 2.23
TMEM173-204ENST00000503287 MROH2BQ7Z745 1585 aa28.92■■■□□ 2.22
TMEM173-204ENST00000503287 CUX2O14529 1486 aa28.9■■■□□ 2.22
TMEM173-204ENST00000503287 ERCC6Q03468 1493 aa28.9■■■□□ 2.22
TMEM173-204ENST00000503287 DNAJC5Q9H3Z4 198 aa28.88■■■□□ 2.21
TMEM173-204ENST00000503287 NESP48681 1621 aa28.81■■■□□ 2.2
TMEM173-204ENST00000503287 LAMC3Q9Y6N6 1575 aa28.68■■■□□ 2.18
TMEM173-204ENST00000503287 PDS5BQ9NTI5 1447 aa28.56■■■□□ 2.16
TMEM173-204ENST00000503287 WIZO95785 1651 aa28.54■■■□□ 2.16
TMEM173-204ENST00000503287 CADPSQ9ULU8 1353 aa28.54■■■□□ 2.16
TMEM173-204ENST00000503287 THOC2Q8NI27 1593 aaKnown RBP28.46■■■□□ 2.15
TMEM173-204ENST00000503287 RSF1Q96T23 1441 aaPredicted RBP28.42■■■□□ 2.14
TMEM173-204ENST00000503287 KIF21AQ7Z4S6 1674 aa28.39■■■□□ 2.14
TMEM173-204ENST00000503287 MRC2Q9UBG0 1479 aa28.22■■■□□ 2.11
TMEM173-204ENST00000503287 CFTRP13569 1480 aa28.21■■■□□ 2.11
TMEM173-204ENST00000503287 TOP2AP11388 1531 aaKnown RBP28.21■■■□□ 2.11
TMEM173-204ENST00000503287 WDR62O43379 1518 aa28.15■■■□□ 2.1
TMEM173-204ENST00000503287 FANCD2Q9BXW9 1451 aa28.13■■■□□ 2.09
TMEM173-204ENST00000503287 CEP164Q9UPV0 1460 aa28.13■■■□□ 2.09
TMEM173-204ENST00000503287 CCDC88BA6NC98 1476 aa27.95■■■□□ 2.07
TMEM173-204ENST00000503287 URB2Q14146 1524 aaKnown RBP27.88■■■□□ 2.05
TMEM173-204ENST00000503287 PRDM2Q13029 1718 aa27.81■■■□□ 2.04
TMEM173-204ENST00000503287 OSCARQ8IYS5 282 aa27.7■■■□□ 2.02
TMEM173-204ENST00000503287 ABCC8Q09428 1581 aa27.65■■■□□ 2.02
TMEM173-204ENST00000503287 IFT140Q96RY7 1462 aa27.61■■■□□ 2.01
TMEM173-204ENST00000503287 TOPBP1Q92547 1522 aa27.61■■■□□ 2.01
TMEM173-204ENST00000503287 ZNF608Q9ULD9 1512 aaPredicted RBP27.51■■□□□ 1.99
TMEM173-204ENST00000503287 DNMBPQ6XZF7 1577 aa27.49■■□□□ 1.99
TMEM173-204ENST00000503287 TRIM41Q8WV44 630 aa27.48■■□□□ 1.99
TMEM173-204ENST00000503287 TARBP1Q13395 1621 aaKnown RBP27.35■■□□□ 1.97
TMEM173-204ENST00000503287 POLA1P09884 1462 aaPredicted RBP27.33■■□□□ 1.97
TMEM173-204ENST00000503287 AQRO60306 1485 aaKnown RBP eCLIP27.32■■□□□ 1.961e-6■■■■■ 32.6
TMEM173-204ENST00000503287 EIF4G3O43432 1585 aaKnown RBP27.3■■□□□ 1.96
TMEM173-204ENST00000503287 SOGA1O94964 1423 aa27.27■■□□□ 1.96
TMEM173-204ENST00000503287 RAD54L2Q9Y4B4 1467 aa27.22■■□□□ 1.95
TMEM173-204ENST00000503287 SUPT5HO00267 1087 aaKnown RBP27.2■■□□□ 1.94
TMEM173-204ENST00000503287 TDRD9Q8NDG6 1382 aaKnown RBP27.17■■□□□ 1.94
TMEM173-204ENST00000503287 FGD5Q6ZNL6 1462 aa27.15■■□□□ 1.94
TMEM173-204ENST00000503287 RIMBP3CA6NJZ7 1639 aa27.15■■□□□ 1.94
TMEM173-204ENST00000503287 RIMBP3BA6NNM3 1639 aa27.15■■□□□ 1.94
TMEM173-204ENST00000503287 RIMBP3Q9UFD9 1639 aa27.15■■□□□ 1.94
TMEM173-204ENST00000503287 CUX1P39880 1505 aa27.15■■□□□ 1.94
TMEM173-204ENST00000503287 WDR97A6NE52 1622 aa27.12■■□□□ 1.93
TMEM173-204ENST00000503287 FBLN2P98095 1184 aa27.1■■□□□ 1.93
TMEM173-204ENST00000503287 ARHGEF11O15085 1522 aa27.1■■□□□ 1.93
TMEM173-204ENST00000503287 CHD1O14646 1710 aa27.07■■□□□ 1.92
TMEM173-204ENST00000503287 CHMP7Q8WUX9 453 aaPredicted RBP26.99■■□□□ 1.91
TMEM173-204ENST00000503287 GRIN2BQ13224 1484 aa26.99■■□□□ 1.91
TMEM173-204ENST00000503287 CYB5RLQ6IPT4 315 aa26.98■■□□□ 1.91
TMEM173-204ENST00000503287 SNAPC4Q5SXM2 1469 aa26.97■■□□□ 1.91
TMEM173-204ENST00000503287 MAGI1Q96QZ7 1491 aaPredicted RBP26.97■■□□□ 1.91
TMEM173-204ENST00000503287 ABCA10Q8WWZ4 1543 aa26.91■■□□□ 1.9
TMEM173-204ENST00000503287 GAPVD1Q14C86 1478 aa26.9■■□□□ 1.9
TMEM173-204ENST00000503287 SYNJ2O15056 1496 aa26.88■■□□□ 1.89
TMEM173-204ENST00000503287 CLASP1Q7Z460 1538 aa26.84■■□□□ 1.89
TMEM173-204ENST00000503287 WRNQ14191 1432 aaPredicted RBP eCLIP26.83■■□□□ 1.89
TMEM173-204ENST00000503287 ARAP1Q96P48 1450 aa26.83■■□□□ 1.89
TMEM173-204ENST00000503287 SYNJ1O43426 1573 aa26.82■■□□□ 1.88
TMEM173-204ENST00000503287 ABCA5Q8WWZ7 1642 aa26.78■■□□□ 1.88
TMEM173-204ENST00000503287 PBRM1Q86U86 1689 aa26.77■■□□□ 1.88
TMEM173-204ENST00000503287 TOP2BQ02880 1626 aa26.76■■□□□ 1.87
TMEM173-204ENST00000503287 BIVM-ERCC5R4GMW8 1640 aa26.74■■□□□ 1.87
TMEM173-204ENST00000503287 GRIN2AQ12879 1464 aa26.62■■□□□ 1.85
TMEM173-204ENST00000503287 TRHP20396 242 aaPredicted RBP26.6■■□□□ 1.85
TMEM173-204ENST00000503287 FHAD1B1AJZ9 1412 aa26.59■■□□□ 1.85
TMEM173-204ENST00000503287 ERICH3Q5RHP9 1530 aa26.57■■□□□ 1.84
TMEM173-204ENST00000503287 NUP160Q12769 1436 aa26.56■■□□□ 1.84
TMEM173-204ENST00000503287 ADAMTS12P58397 1594 aa26.54■■□□□ 1.84
TMEM173-204ENST00000503287 CEP170Q5SW79 1584 aa26.47■■□□□ 1.83
TMEM173-204ENST00000503287 JPH4Q96JJ6 628 aa26.39■■□□□ 1.82
TMEM173-204ENST00000503287 SHROOM2Q13796 1616 aa26.39■■□□□ 1.81
TMEM173-204ENST00000503287 ERCC6L2Q5T890 1561 aa26.38■■□□□ 1.81
TMEM173-204ENST00000503287 IGF1RP08069 1367 aa26.33■■□□□ 1.81
TMEM173-204ENST00000503287 KIF27Q86VH2 1401 aa26.29■■□□□ 1.8
TMEM173-204ENST00000503287 PRG4Q92954 1404 aaPredicted RBP26.28■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms