RNA–Protein interactions for RNA: ENST00000503166.1

PLXND1-203, Transcript of plexin D1, humanhuman

TSL 3

Gene PLXND1, Length 626 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLXND1-203ENST00000503166 NISCHQ9Y2I1 1504 aa31.42■■■□□ 2.62
PLXND1-203ENST00000503166 CCDC180Q9P1Z9 1646 aa27.99■■■□□ 2.07
PLXND1-203ENST00000503166 ABCC9O60706 1549 aa27.69■■■□□ 2.02
PLXND1-203ENST00000503166 RB1CC1Q8TDY2 1594 aa26.47■■□□□ 1.83
PLXND1-203ENST00000503166 NACADO15069 1562 aa26.38■■□□□ 1.81
PLXND1-203ENST00000503166 DCAF8L2P0C7V8 631 aa26.34■■□□□ 1.81
PLXND1-203ENST00000503166 MYO15BQ96JP2 1530 aa26.14■■□□□ 1.78
PLXND1-203ENST00000503166 ZCCHC6Q5VYS8 1495 aaKnown RBP26.14■■□□□ 1.78
PLXND1-203ENST00000503166 DCAF1Q9Y4B6 1507 aa25.95■■□□□ 1.74
PLXND1-203ENST00000503166 UNC13AQ9UPW8 1703 aa25.86■■□□□ 1.73
PLXND1-203ENST00000503166 PABPN1Q86U42 306 aaKnown RBP eCLIP25.85■■□□□ 1.73
PLXND1-203ENST00000503166 BICRAQ9NZM4 1560 aa25.73■■□□□ 1.71
PLXND1-203ENST00000503166 DNAJC5BQ9UF47 199 aa25.67■■□□□ 1.7
PLXND1-203ENST00000503166 SCRIBQ14160 1630 aa25.58■■□□□ 1.69
PLXND1-203ENST00000503166 SHROOM4Q9ULL8 1493 aa25.37■■□□□ 1.65
PLXND1-203ENST00000503166 EIF4G1Q04637 1599 aaKnown RBP25.05■■□□□ 1.6
PLXND1-203ENST00000503166 CC2D2AQ9P2K1 1620 aa25.01■■□□□ 1.59
PLXND1-203ENST00000503166 CECR2Q9BXF3 1484 aa24.89■■□□□ 1.57
PLXND1-203ENST00000503166 SMARCA4P51532 1647 aa24.43■■□□□ 1.5
PLXND1-203ENST00000503166 NCAPD3P42695 1498 aa24.38■■□□□ 1.49
PLXND1-203ENST00000503166 ATAD2BQ9ULI0 1458 aa24.37■■□□□ 1.49
PLXND1-203ENST00000503166 BAZ1AQ9NRL2 1556 aaPredicted RBP24.35■■□□□ 1.49
PLXND1-203ENST00000503166 SMARCA2P51531 1590 aa24.29■■□□□ 1.48
PLXND1-203ENST00000503166 MROH2BQ7Z745 1585 aa24.25■■□□□ 1.47
PLXND1-203ENST00000503166 HMGXB3Q12766 1538 aa24.22■■□□□ 1.47
PLXND1-203ENST00000503166 PEG3Q9GZU2 1588 aa24.18■■□□□ 1.46
PLXND1-203ENST00000503166 BAZ1BQ9UIG0 1483 aaKnown RBP24.14■■□□□ 1.46
PLXND1-203ENST00000503166 WIZO95785 1651 aa23.94■■□□□ 1.42
PLXND1-203ENST00000503166 NESP48681 1621 aa23.91■■□□□ 1.42
PLXND1-203ENST00000503166 RSF1Q96T23 1441 aaPredicted RBP23.87■■□□□ 1.41
PLXND1-203ENST00000503166 ERCC6Q03468 1493 aa23.84■■□□□ 1.41
PLXND1-203ENST00000503166 LAMC3Q9Y6N6 1575 aa23.74■■□□□ 1.39
PLXND1-203ENST00000503166 TOP2AP11388 1531 aaKnown RBP23.67■■□□□ 1.38
PLXND1-203ENST00000503166 CUX2O14529 1486 aa23.67■■□□□ 1.38
PLXND1-203ENST00000503166 CADPSQ9ULU8 1353 aa23.65■■□□□ 1.38
PLXND1-203ENST00000503166 PDS5BQ9NTI5 1447 aa23.59■■□□□ 1.37
PLXND1-203ENST00000503166 KIF21AQ7Z4S6 1674 aa23.57■■□□□ 1.36
PLXND1-203ENST00000503166 THOC2Q8NI27 1593 aaKnown RBP23.57■■□□□ 1.36
PLXND1-203ENST00000503166 CFTRP13569 1480 aa23.47■■□□□ 1.35
PLXND1-203ENST00000503166 CCDC88BA6NC98 1476 aa23.41■■□□□ 1.34
PLXND1-203ENST00000503166 FANCD2Q9BXW9 1451 aa23.39■■□□□ 1.34
PLXND1-203ENST00000503166 MRC2Q9UBG0 1479 aa23.39■■□□□ 1.34
PLXND1-203ENST00000503166 CEP164Q9UPV0 1460 aa23.36■■□□□ 1.33
PLXND1-203ENST00000503166 WDR62O43379 1518 aa23.33■■□□□ 1.32
PLXND1-203ENST00000503166 DNAJC5Q9H3Z4 198 aa23.24■■□□□ 1.31
PLXND1-203ENST00000503166 PRDM2Q13029 1718 aa23.19■■□□□ 1.3
PLXND1-203ENST00000503166 URB2Q14146 1524 aaKnown RBP23.19■■□□□ 1.3
PLXND1-203ENST00000503166 SUPT5HO00267 1087 aaKnown RBP23.09■■□□□ 1.29
PLXND1-203ENST00000503166 TOPBP1Q92547 1522 aa23■■□□□ 1.27
PLXND1-203ENST00000503166 DNMBPQ6XZF7 1577 aa22.93■■□□□ 1.26
PLXND1-203ENST00000503166 ABCC8Q09428 1581 aa22.91■■□□□ 1.26
PLXND1-203ENST00000503166 IFT140Q96RY7 1462 aa22.88■■□□□ 1.25
PLXND1-203ENST00000503166 ZNF608Q9ULD9 1512 aaPredicted RBP22.85■■□□□ 1.25
PLXND1-203ENST00000503166 POLA1P09884 1462 aaPredicted RBP22.79■■□□□ 1.24
PLXND1-203ENST00000503166 TARBP1Q13395 1621 aaKnown RBP22.75■■□□□ 1.23
PLXND1-203ENST00000503166 CUX1P39880 1505 aa22.75■■□□□ 1.23
PLXND1-203ENST00000503166 RAD54L2Q9Y4B4 1467 aa22.72■■□□□ 1.23
PLXND1-203ENST00000503166 EIF4G3O43432 1585 aaKnown RBP22.72■■□□□ 1.23
PLXND1-203ENST00000503166 FGD5Q6ZNL6 1462 aa22.71■■□□□ 1.23
PLXND1-203ENST00000503166 AQRO60306 1485 aaKnown RBP eCLIP22.68■■□□□ 1.223e-6■■□□□ 13.8
PLXND1-203ENST00000503166 SOGA1O94964 1423 aa22.67■■□□□ 1.22
PLXND1-203ENST00000503166 OSCARQ8IYS5 282 aa22.64■■□□□ 1.21
PLXND1-203ENST00000503166 TDRD9Q8NDG6 1382 aaKnown RBP22.61■■□□□ 1.21
PLXND1-203ENST00000503166 WDR97A6NE52 1622 aa22.5■■□□□ 1.19
PLXND1-203ENST00000503166 WRNQ14191 1432 aaPredicted RBP eCLIP22.49■■□□□ 1.19
PLXND1-203ENST00000503166 SYNJ1O43426 1573 aa22.47■■□□□ 1.19
PLXND1-203ENST00000503166 SNAPC4Q5SXM2 1469 aa22.46■■□□□ 1.19
PLXND1-203ENST00000503166 ABCA10Q8WWZ4 1543 aa22.46■■□□□ 1.19
PLXND1-203ENST00000503166 TOP2BQ02880 1626 aa22.46■■□□□ 1.19
PLXND1-203ENST00000503166 CHD1O14646 1710 aa22.45■■□□□ 1.19
PLXND1-203ENST00000503166 BIVM-ERCC5R4GMW8 1640 aa22.45■■□□□ 1.18
PLXND1-203ENST00000503166 GRIN2BQ13224 1484 aa22.43■■□□□ 1.18
PLXND1-203ENST00000503166 FBLN2P98095 1184 aa22.43■■□□□ 1.18
PLXND1-203ENST00000503166 GAPVD1Q14C86 1478 aa22.41■■□□□ 1.18
PLXND1-203ENST00000503166 TRIM41Q8WV44 630 aa22.39■■□□□ 1.17
PLXND1-203ENST00000503166 MAGI1Q96QZ7 1491 aaPredicted RBP22.39■■□□□ 1.17
PLXND1-203ENST00000503166 ABCA5Q8WWZ7 1642 aa22.39■■□□□ 1.17
PLXND1-203ENST00000503166 PBRM1Q86U86 1689 aa22.35■■□□□ 1.17
PLXND1-203ENST00000503166 RIMBP3CA6NJZ7 1639 aa22.32■■□□□ 1.16
PLXND1-203ENST00000503166 RIMBP3BA6NNM3 1639 aa22.32■■□□□ 1.16
PLXND1-203ENST00000503166 RIMBP3Q9UFD9 1639 aa22.32■■□□□ 1.16
PLXND1-203ENST00000503166 ARHGEF11O15085 1522 aa22.31■■□□□ 1.16
PLXND1-203ENST00000503166 SYNJ2O15056 1496 aa22.31■■□□□ 1.16
PLXND1-203ENST00000503166 CHMP7Q8WUX9 453 aaPredicted RBP22.31■■□□□ 1.16
PLXND1-203ENST00000503166 CLASP1Q7Z460 1538 aa22.24■■□□□ 1.15
PLXND1-203ENST00000503166 ADAMTS12P58397 1594 aa22.2■■□□□ 1.14
PLXND1-203ENST00000503166 ERICH3Q5RHP9 1530 aa22.16■■□□□ 1.14
PLXND1-203ENST00000503166 GRIN2AQ12879 1464 aa22.15■■□□□ 1.14
PLXND1-203ENST00000503166 ARAP1Q96P48 1450 aa22.14■■□□□ 1.13
PLXND1-203ENST00000503166 FHAD1B1AJZ9 1412 aa22.14■■□□□ 1.13
PLXND1-203ENST00000503166 CYB5RLQ6IPT4 315 aa22.11■■□□□ 1.13
PLXND1-203ENST00000503166 NUP160Q12769 1436 aa22.07■■□□□ 1.12
PLXND1-203ENST00000503166 CEP170Q5SW79 1584 aa22.07■■□□□ 1.12
PLXND1-203ENST00000503166 KIF27Q86VH2 1401 aa22.03■■□□□ 1.12
PLXND1-203ENST00000503166 IGF1RP08069 1367 aa21.99■■□□□ 1.11
PLXND1-203ENST00000503166 ERCC6L2Q5T890 1561 aa21.95■■□□□ 1.11
PLXND1-203ENST00000503166 SHROOM2Q13796 1616 aa21.91■■□□□ 1.1
PLXND1-203ENST00000503166 CUL7Q14999 1698 aa21.89■■□□□ 1.1
PLXND1-203ENST00000503166 RUSC2Q8N2Y8 1516 aa21.87■■□□□ 1.09
PLXND1-203ENST00000503166 CARMIL1Q5VZK9 1371 aa21.85■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms