RNA–Protein interactions for RNA: ENST00000503132.1

CDH18-204, Transcript of cadherin 18, humanhuman

TSL 4

Gene CDH18, Length 498 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH18-204ENST00000503132 NISCHQ9Y2I1 1504 aa20.54■□□□□ 0.88
CDH18-204ENST00000503132 ABCC9O60706 1549 aa19.74■□□□□ 0.75
CDH18-204ENST00000503132 DNAJC5BQ9UF47 199 aa19.14■□□□□ 0.65
CDH18-204ENST00000503132 CCDC180Q9P1Z9 1646 aa18.92■□□□□ 0.62
CDH18-204ENST00000503132 RB1CC1Q8TDY2 1594 aa18.4■□□□□ 0.54
CDH18-204ENST00000503132 DNAJC5Q9H3Z4 198 aa18.21■□□□□ 0.51
CDH18-204ENST00000503132 PABPN1Q86U42 306 aaKnown RBP eCLIP18.17■□□□□ 0.5
CDH18-204ENST00000503132 UNC13AQ9UPW8 1703 aa18.09■□□□□ 0.49
CDH18-204ENST00000503132 NACADO15069 1562 aa18.01■□□□□ 0.47
CDH18-204ENST00000503132 BICRAQ9NZM4 1560 aa17.86■□□□□ 0.45
CDH18-204ENST00000503132 CECR2Q9BXF3 1484 aa17.84■□□□□ 0.45
CDH18-204ENST00000503132 CC2D2AQ9P2K1 1620 aa17.8■□□□□ 0.44
CDH18-204ENST00000503132 DCAF8L2P0C7V8 631 aa17.77■□□□□ 0.44
CDH18-204ENST00000503132 EIF4G1Q04637 1599 aaKnown RBP17.53■□□□□ 0.4
CDH18-204ENST00000503132 SHROOM4Q9ULL8 1493 aa17.48■□□□□ 0.39
CDH18-204ENST00000503132 MYO15BQ96JP2 1530 aa17.38■□□□□ 0.37
CDH18-204ENST00000503132 CUX2O14529 1486 aa17.32■□□□□ 0.36
CDH18-204ENST00000503132 SCRIBQ14160 1630 aa17.23■□□□□ 0.35
CDH18-204ENST00000503132 TRIM41Q8WV44 630 aa17.21■□□□□ 0.35
CDH18-204ENST00000503132 ERCC6Q03468 1493 aa17.13■□□□□ 0.33
CDH18-204ENST00000503132 DCAF1Q9Y4B6 1507 aa16.87■□□□□ 0.29
CDH18-204ENST00000503132 ZCCHC6Q5VYS8 1495 aaKnown RBP16.86■□□□□ 0.29
CDH18-204ENST00000503132 THOC2Q8NI27 1593 aaKnown RBP16.74■□□□□ 0.27
CDH18-204ENST00000503132 NESP48681 1621 aa16.69■□□□□ 0.26
CDH18-204ENST00000503132 SMARCA2P51531 1590 aa16.63■□□□□ 0.25
CDH18-204ENST00000503132 NCAPD3P42695 1498 aa16.56■□□□□ 0.24
CDH18-204ENST00000503132 KIF21AQ7Z4S6 1674 aa16.56■□□□□ 0.24
CDH18-204ENST00000503132 BAZ1AQ9NRL2 1556 aaPredicted RBP16.52■□□□□ 0.24
CDH18-204ENST00000503132 HMGXB3Q12766 1538 aa16.45■□□□□ 0.22
CDH18-204ENST00000503132 LAMC3Q9Y6N6 1575 aa16.44■□□□□ 0.22
CDH18-204ENST00000503132 ATAD2BQ9ULI0 1458 aa16.43■□□□□ 0.22
CDH18-204ENST00000503132 AEBP2Q6ZN18 517 aaPredicted RBP16.41■□□□□ 0.22
CDH18-204ENST00000503132 RIMBP3CA6NJZ7 1639 aa16.36■□□□□ 0.21
CDH18-204ENST00000503132 RIMBP3BA6NNM3 1639 aa16.36■□□□□ 0.21
CDH18-204ENST00000503132 RIMBP3Q9UFD9 1639 aa16.36■□□□□ 0.21
CDH18-204ENST00000503132 OSCARQ8IYS5 282 aa16.32■□□□□ 0.2
CDH18-204ENST00000503132 PDS5BQ9NTI5 1447 aa16.32■□□□□ 0.2
CDH18-204ENST00000503132 BAZ1BQ9UIG0 1483 aaKnown RBP16.29■□□□□ 0.2
CDH18-204ENST00000503132 SMARCA4P51532 1647 aa16.29■□□□□ 0.2
CDH18-204ENST00000503132 MRC2Q9UBG0 1479 aa16.28■□□□□ 0.2
CDH18-204ENST00000503132 WDR62O43379 1518 aa16.27■□□□□ 0.2
CDH18-204ENST00000503132 TRHP20396 242 aaPredicted RBP16.22■□□□□ 0.19
CDH18-204ENST00000503132 ARHGEF11O15085 1522 aa16.16■□□□□ 0.18
CDH18-204ENST00000503132 CEP164Q9UPV0 1460 aa16.06■□□□□ 0.16
CDH18-204ENST00000503132 PEG3Q9GZU2 1588 aa16.05■□□□□ 0.16
CDH18-204ENST00000503132 CYB5RLQ6IPT4 315 aa16.05■□□□□ 0.16
CDH18-204ENST00000503132 CADPSQ9ULU8 1353 aa16.03■□□□□ 0.16
CDH18-204ENST00000503132 ARAP1Q96P48 1450 aa15.93■□□□□ 0.14
CDH18-204ENST00000503132 FANCD2Q9BXW9 1451 aa15.93■□□□□ 0.14
CDH18-204ENST00000503132 CHD1O14646 1710 aa15.85■□□□□ 0.13
CDH18-204ENST00000503132 URB2Q14146 1524 aaKnown RBP15.84■□□□□ 0.13
CDH18-204ENST00000503132 MROH2BQ7Z745 1585 aa15.84■□□□□ 0.13
CDH18-204ENST00000503132 ILDR1Q86SU0 546 aaPredicted RBP15.8■□□□□ 0.12
CDH18-204ENST00000503132 ZNF608Q9ULD9 1512 aaPredicted RBP15.79■□□□□ 0.12
CDH18-204ENST00000503132 EIF4G3O43432 1585 aaKnown RBP15.76■□□□□ 0.11
CDH18-204ENST00000503132 RSF1Q96T23 1441 aaPredicted RBP15.73■□□□□ 0.11
CDH18-204ENST00000503132 IFT140Q96RY7 1462 aa15.72■□□□□ 0.11
CDH18-204ENST00000503132 WIZO95785 1651 aa15.69■□□□□ 0.1
CDH18-204ENST00000503132 CFTRP13569 1480 aa15.68■□□□□ 0.1
CDH18-204ENST00000503132 PRDM2Q13029 1718 aa15.67■□□□□ 0.1
CDH18-204ENST00000503132 FBLN2P98095 1184 aa15.64■□□□□ 0.09
CDH18-204ENST00000503132 CLASP1Q7Z460 1538 aa15.53■□□□□ 0.08
CDH18-204ENST00000503132 TOPBP1Q92547 1522 aa15.53■□□□□ 0.08
CDH18-204ENST00000503132 AQRO60306 1485 aaKnown RBP eCLIP15.52■□□□□ 0.08
CDH18-204ENST00000503132 SYNJ1O43426 1573 aa15.49■□□□□ 0.07
CDH18-204ENST00000503132 CHIC1Q5VXU3 224 aa15.48■□□□□ 0.07
CDH18-204ENST00000503132 TARBP1Q13395 1621 aaKnown RBP15.47■□□□□ 0.07
CDH18-204ENST00000503132 GAPVD1Q14C86 1478 aa15.43■□□□□ 0.06
CDH18-204ENST00000503132 DNMBPQ6XZF7 1577 aa15.43■□□□□ 0.06
CDH18-204ENST00000503132 KIF13AQ9H1H9 1805 aa15.41■□□□□ 0.06
CDH18-204ENST00000503132 ABCC8Q09428 1581 aa15.4■□□□□ 0.06
CDH18-204ENST00000503132 SNAPC4Q5SXM2 1469 aa15.4■□□□□ 0.06
CDH18-204ENST00000503132 TOP2AP11388 1531 aaKnown RBP15.38■□□□□ 0.05
CDH18-204ENST00000503132 CHMP7Q8WUX9 453 aaPredicted RBP15.33■□□□□ 0.04
CDH18-204ENST00000503132 KDM4FA0A1W2PPD8 638 aa15.32■□□□□ 0.04
CDH18-204ENST00000503132 POLA1P09884 1462 aaPredicted RBP15.31■□□□□ 0.04
CDH18-204ENST00000503132 TDRD9Q8NDG6 1382 aaKnown RBP15.28■□□□□ 0.04
CDH18-204ENST00000503132 MAGI1Q96QZ7 1491 aaPredicted RBP15.27■□□□□ 0.04
CDH18-204ENST00000503132 RAD54L2Q9Y4B4 1467 aa15.27■□□□□ 0.04
CDH18-204ENST00000503132 WDR97A6NE52 1622 aa15.25■□□□□ 0.03
CDH18-204ENST00000503132 ERCC6L2Q5T890 1561 aa15.25■□□□□ 0.03
CDH18-204ENST00000503132 KDM6BO15054 1643 aa15.25■□□□□ 0.03
CDH18-204ENST00000503132 SYNJ2O15056 1496 aa15.24■□□□□ 0.03
CDH18-204ENST00000503132 PBRM1Q86U86 1689 aa15.22■□□□□ 0.03
CDH18-204ENST00000503132 HECW2Q9P2P5 1572 aa15.21■□□□□ 0.03
CDH18-204ENST00000503132 SOGA1O94964 1423 aa15.19■□□□□ 0.02
CDH18-204ENST00000503132 GRIN2BQ13224 1484 aa15.18■□□□□ 0.02
CDH18-204ENST00000503132 CCDC88BA6NC98 1476 aa15.16■□□□□ 0.02
CDH18-204ENST00000503132 TSPOAP1O95153 1857 aa15.16■□□□□ 0.02
CDH18-204ENST00000503132 CEP170Q5SW79 1584 aa15.13■□□□□ 0.01
CDH18-204ENST00000503132 FGD5Q6ZNL6 1462 aa15.12■□□□□ 0.01
CDH18-204ENST00000503132 FAM69CQ0P6D2 419 aa15.11■□□□□ 0.01
CDH18-204ENST00000503132 DIP2BQ9P265 1576 aa15.11■□□□□ 0.01
CDH18-204ENST00000503132 ADGRL1O94910 1474 aa15.1■□□□□ 0.01
CDH18-204ENST00000503132 ABCC10Q5T3U5 1492 aa15.09■□□□□ 0.01
CDH18-204ENST00000503132 FBXO41Q8TF61 875 aa15.08■□□□□ 0
CDH18-204ENST00000503132 LMTK3Q96Q04 1460 aa15.05■□□□□ -0
CDH18-204ENST00000503132 SHROOM2Q13796 1616 aa15.04■□□□□ -0
CDH18-204ENST00000503132 GRIN2AQ12879 1464 aa15.01□□□□□ -0.01
CDH18-204ENST00000503132 MAPKBP1O60336 1514 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms