RNA–Protein interactions for RNA: ENST00000503084.1

TNPO1-202, Transcript of transportin 1, humanhuman

TSL 2

Gene TNPO1, Length 623 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNPO1-202ENST00000503084 NISCHQ9Y2I1 1504 aa30.09■■■□□ 2.41
TNPO1-202ENST00000503084 ABCC9O60706 1549 aa28.43■■■□□ 2.14
TNPO1-202ENST00000503084 DNAJC5BQ9UF47 199 aa27.52■■■□□ 2
TNPO1-202ENST00000503084 CCDC180Q9P1Z9 1646 aa27.46■■□□□ 1.99
TNPO1-202ENST00000503084 RB1CC1Q8TDY2 1594 aa26.59■■□□□ 1.85
TNPO1-202ENST00000503084 PABPN1Q86U42 306 aaKnown RBP eCLIP26.27■■□□□ 1.8
TNPO1-202ENST00000503084 NACADO15069 1562 aa26.16■■□□□ 1.78
TNPO1-202ENST00000503084 UNC13AQ9UPW8 1703 aa26.03■■□□□ 1.76
TNPO1-202ENST00000503084 DNAJC5Q9H3Z4 198 aa25.95■■□□□ 1.74
TNPO1-202ENST00000503084 BICRAQ9NZM4 1560 aa25.91■■□□□ 1.74
TNPO1-202ENST00000503084 DCAF8L2P0C7V8 631 aa25.72■■□□□ 1.71
TNPO1-202ENST00000503084 CECR2Q9BXF3 1484 aa25.71■■□□□ 1.71
TNPO1-202ENST00000503084 CC2D2AQ9P2K1 1620 aa25.63■■□□□ 1.69
TNPO1-202ENST00000503084 MYO15BQ96JP2 1530 aa25.47■■□□□ 1.67
TNPO1-202ENST00000503084 SHROOM4Q9ULL8 1493 aa25.42■■□□□ 1.66
TNPO1-202ENST00000503084 EIF4G1Q04637 1599 aaKnown RBP25.34■■□□□ 1.65
TNPO1-202ENST00000503084 SCRIBQ14160 1630 aa25■■□□□ 1.59
TNPO1-202ENST00000503084 CUX2O14529 1486 aa24.9■■□□□ 1.58
TNPO1-202ENST00000503084 DCAF1Q9Y4B6 1507 aa24.78■■□□□ 1.56
TNPO1-202ENST00000503084 ZCCHC6Q5VYS8 1495 aaKnown RBP24.77■■□□□ 1.56
TNPO1-202ENST00000503084 ERCC6Q03468 1493 aa24.6■■□□□ 1.53
TNPO1-202ENST00000503084 TRIM41Q8WV44 630 aa24.43■■□□□ 1.5
TNPO1-202ENST00000503084 NCAPD3P42695 1498 aa24.16■■□□□ 1.46
TNPO1-202ENST00000503084 NESP48681 1621 aa24.16■■□□□ 1.46
TNPO1-202ENST00000503084 THOC2Q8NI27 1593 aaKnown RBP24.15■■□□□ 1.46
TNPO1-202ENST00000503084 ATAD2BQ9ULI0 1458 aa23.97■■□□□ 1.43
TNPO1-202ENST00000503084 SMARCA2P51531 1590 aa23.94■■□□□ 1.42
TNPO1-202ENST00000503084 HMGXB3Q12766 1538 aa23.93■■□□□ 1.42
TNPO1-202ENST00000503084 KIF21AQ7Z4S6 1674 aa23.81■■□□□ 1.4
TNPO1-202ENST00000503084 LAMC3Q9Y6N6 1575 aa23.78■■□□□ 1.4
TNPO1-202ENST00000503084 SMARCA4P51532 1647 aa23.72■■□□□ 1.39
TNPO1-202ENST00000503084 BAZ1AQ9NRL2 1556 aaPredicted RBP23.69■■□□□ 1.38
TNPO1-202ENST00000503084 BAZ1BQ9UIG0 1483 aaKnown RBP23.68■■□□□ 1.38
TNPO1-202ENST00000503084 PDS5BQ9NTI5 1447 aa23.65■■□□□ 1.38
TNPO1-202ENST00000503084 MRC2Q9UBG0 1479 aa23.56■■□□□ 1.36
TNPO1-202ENST00000503084 WDR62O43379 1518 aa23.56■■□□□ 1.36
TNPO1-202ENST00000503084 OSCARQ8IYS5 282 aa23.49■■□□□ 1.35
TNPO1-202ENST00000503084 PEG3Q9GZU2 1588 aa23.48■■□□□ 1.35
TNPO1-202ENST00000503084 RIMBP3CA6NJZ7 1639 aa23.43■■□□□ 1.34
TNPO1-202ENST00000503084 RIMBP3BA6NNM3 1639 aa23.43■■□□□ 1.34
TNPO1-202ENST00000503084 RIMBP3Q9UFD9 1639 aa23.43■■□□□ 1.34
TNPO1-202ENST00000503084 CADPSQ9ULU8 1353 aa23.36■■□□□ 1.33
TNPO1-202ENST00000503084 CEP164Q9UPV0 1460 aa23.26■■□□□ 1.31
TNPO1-202ENST00000503084 ARHGEF11O15085 1522 aa23.25■■□□□ 1.31
TNPO1-202ENST00000503084 MROH2BQ7Z745 1585 aa23.2■■□□□ 1.3
TNPO1-202ENST00000503084 FANCD2Q9BXW9 1451 aa23.14■■□□□ 1.29
TNPO1-202ENST00000503084 AEBP2Q6ZN18 517 aaPredicted RBP23.14■■□□□ 1.29
TNPO1-202ENST00000503084 TRHP20396 242 aaPredicted RBP23.09■■□□□ 1.29
TNPO1-202ENST00000503084 URB2Q14146 1524 aaKnown RBP23.04■■□□□ 1.28
TNPO1-202ENST00000503084 CYB5RLQ6IPT4 315 aa23.04■■□□□ 1.28
TNPO1-202ENST00000503084 ARAP1Q96P48 1450 aa22.98■■□□□ 1.27
TNPO1-202ENST00000503084 ZNF608Q9ULD9 1512 aaPredicted RBP22.92■■□□□ 1.26
TNPO1-202ENST00000503084 CFTRP13569 1480 aa22.92■■□□□ 1.26
TNPO1-202ENST00000503084 WIZO95785 1651 aa22.87■■□□□ 1.25
TNPO1-202ENST00000503084 IFT140Q96RY7 1462 aa22.82■■□□□ 1.24
TNPO1-202ENST00000503084 CHD1O14646 1710 aa22.77■■□□□ 1.23
TNPO1-202ENST00000503084 EIF4G3O43432 1585 aaKnown RBP22.76■■□□□ 1.23
TNPO1-202ENST00000503084 RSF1Q96T23 1441 aaPredicted RBP22.74■■□□□ 1.23
TNPO1-202ENST00000503084 PRDM2Q13029 1718 aa22.62■■□□□ 1.21
TNPO1-202ENST00000503084 TOPBP1Q92547 1522 aa22.61■■□□□ 1.21
TNPO1-202ENST00000503084 AQRO60306 1485 aaKnown RBP eCLIP22.55■■□□□ 1.2
TNPO1-202ENST00000503084 FBLN2P98095 1184 aa22.54■■□□□ 1.2
TNPO1-202ENST00000503084 TOP2AP11388 1531 aaKnown RBP22.52■■□□□ 1.2
TNPO1-202ENST00000503084 CLASP1Q7Z460 1538 aa22.5■■□□□ 1.19
TNPO1-202ENST00000503084 TARBP1Q13395 1621 aaKnown RBP22.49■■□□□ 1.19
TNPO1-202ENST00000503084 DNMBPQ6XZF7 1577 aa22.43■■□□□ 1.18
TNPO1-202ENST00000503084 ABCC8Q09428 1581 aa22.4■■□□□ 1.18
TNPO1-202ENST00000503084 ILDR1Q86SU0 546 aaPredicted RBP22.37■■□□□ 1.17
TNPO1-202ENST00000503084 SYNJ1O43426 1573 aa22.34■■□□□ 1.17
TNPO1-202ENST00000503084 SNAPC4Q5SXM2 1469 aa22.33■■□□□ 1.16
TNPO1-202ENST00000503084 POLA1P09884 1462 aaPredicted RBP22.32■■□□□ 1.16
TNPO1-202ENST00000503084 GAPVD1Q14C86 1478 aa22.29■■□□□ 1.16
TNPO1-202ENST00000503084 CCDC88BA6NC98 1476 aa22.24■■□□□ 1.15
TNPO1-202ENST00000503084 RAD54L2Q9Y4B4 1467 aa22.24■■□□□ 1.15
TNPO1-202ENST00000503084 TDRD9Q8NDG6 1382 aaKnown RBP22.24■■□□□ 1.15
TNPO1-202ENST00000503084 MAGI1Q96QZ7 1491 aaPredicted RBP22.2■■□□□ 1.14
TNPO1-202ENST00000503084 CHMP7Q8WUX9 453 aaPredicted RBP22.19■■□□□ 1.14
TNPO1-202ENST00000503084 WDR97A6NE52 1622 aa22.16■■□□□ 1.14
TNPO1-202ENST00000503084 SYNJ2O15056 1496 aa22.14■■□□□ 1.13
TNPO1-202ENST00000503084 SOGA1O94964 1423 aa22.13■■□□□ 1.13
TNPO1-202ENST00000503084 ERCC6L2Q5T890 1561 aa22.09■■□□□ 1.13
TNPO1-202ENST00000503084 GRIN2BQ13224 1484 aa22.09■■□□□ 1.13
TNPO1-202ENST00000503084 KIF13AQ9H1H9 1805 aa22.08■■□□□ 1.13
TNPO1-202ENST00000503084 FGD5Q6ZNL6 1462 aa22.03■■□□□ 1.12
TNPO1-202ENST00000503084 KDM4FA0A1W2PPD8 638 aa22.01■■□□□ 1.11
TNPO1-202ENST00000503084 PBRM1Q86U86 1689 aa21.97■■□□□ 1.11
TNPO1-202ENST00000503084 CEP170Q5SW79 1584 aa21.92■■□□□ 1.1
TNPO1-202ENST00000503084 CUX1P39880 1505 aa21.87■■□□□ 1.09
TNPO1-202ENST00000503084 KDM6BO15054 1643 aa21.83■■□□□ 1.08
TNPO1-202ENST00000503084 GRIN2AQ12879 1464 aa21.83■■□□□ 1.08
TNPO1-202ENST00000503084 SHROOM2Q13796 1616 aa21.82■■□□□ 1.08
TNPO1-202ENST00000503084 ABCA5Q8WWZ7 1642 aa21.81■■□□□ 1.08
TNPO1-202ENST00000503084 ABCC10Q5T3U5 1492 aa21.81■■□□□ 1.08
TNPO1-202ENST00000503084 NUP160Q12769 1436 aa21.8■■□□□ 1.08
TNPO1-202ENST00000503084 FAM69CQ0P6D2 419 aa21.78■■□□□ 1.08
TNPO1-202ENST00000503084 DIP2BQ9P265 1576 aa21.77■■□□□ 1.08
TNPO1-202ENST00000503084 ADAMTS12P58397 1594 aa21.74■■□□□ 1.07
TNPO1-202ENST00000503084 MAPKBP1O60336 1514 aa21.71■■□□□ 1.07
TNPO1-202ENST00000503084 ABCA10Q8WWZ4 1543 aa21.71■■□□□ 1.07
TNPO1-202ENST00000503084 HECW2Q9P2P5 1572 aa21.7■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 94.6 ms