RNA–Protein interactions for RNA: ENST00000502955.5

DDR1-247, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 574 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-247ENST00000502955 NISCHQ9Y2I1 1504 aa34.9■■■■□ 3.18
DDR1-247ENST00000502955 ABCC9O60706 1549 aa31.54■■■□□ 2.64
DDR1-247ENST00000502955 CCDC180Q9P1Z9 1646 aa31.45■■■□□ 2.62
DDR1-247ENST00000502955 RB1CC1Q8TDY2 1594 aa30■■■□□ 2.39
DDR1-247ENST00000502955 DNAJC5BQ9UF47 199 aa29.78■■■□□ 2.36
DDR1-247ENST00000502955 NACADO15069 1562 aa29.77■■■□□ 2.36
DDR1-247ENST00000502955 DCAF8L2P0C7V8 631 aa29.38■■■□□ 2.29
DDR1-247ENST00000502955 MYO15BQ96JP2 1530 aa29.35■■■□□ 2.29
DDR1-247ENST00000502955 UNC13AQ9UPW8 1703 aa29.31■■■□□ 2.28
DDR1-247ENST00000502955 PABPN1Q86U42 306 aaKnown RBP eCLIP29.29■■■□□ 2.28
DDR1-247ENST00000502955 BICRAQ9NZM4 1560 aa29.14■■■□□ 2.26
DDR1-247ENST00000502955 ZCCHC6Q5VYS8 1495 aaKnown RBP28.89■■■□□ 2.22
DDR1-247ENST00000502955 DCAF1Q9Y4B6 1507 aa28.89■■■□□ 2.21
DDR1-247ENST00000502955 SHROOM4Q9ULL8 1493 aa28.81■■■□□ 2.2
DDR1-247ENST00000502955 SCRIBQ14160 1630 aa28.54■■■□□ 2.16
DDR1-247ENST00000502955 CC2D2AQ9P2K1 1620 aa28.53■■■□□ 2.16
DDR1-247ENST00000502955 CECR2Q9BXF3 1484 aa28.47■■■□□ 2.15
DDR1-247ENST00000502955 EIF4G1Q04637 1599 aaKnown RBP28.44■■■□□ 2.14
DDR1-247ENST00000502955 DNAJC5Q9H3Z4 198 aa27.55■■■□□ 2
DDR1-247ENST00000502955 NCAPD3P42695 1498 aa27.49■■□□□ 1.99
DDR1-247ENST00000502955 CUX2O14529 1486 aa27.36■■□□□ 1.97
DDR1-247ENST00000502955 ATAD2BQ9ULI0 1458 aa27.34■■□□□ 1.97
DDR1-247ENST00000502955 SMARCA2P51531 1590 aa27.27■■□□□ 1.96
DDR1-247ENST00000502955 HMGXB3Q12766 1538 aa27.27■■□□□ 1.96
DDR1-247ENST00000502955 SMARCA4P51532 1647 aa27.26■■□□□ 1.95
DDR1-247ENST00000502955 ERCC6Q03468 1493 aa27.25■■□□□ 1.95
DDR1-247ENST00000502955 BAZ1AQ9NRL2 1556 aaPredicted RBP27.1■■□□□ 1.93
DDR1-247ENST00000502955 PEG3Q9GZU2 1588 aa27.06■■□□□ 1.92
DDR1-247ENST00000502955 BAZ1BQ9UIG0 1483 aaKnown RBP27.05■■□□□ 1.92
DDR1-247ENST00000502955 NESP48681 1621 aa27.05■■□□□ 1.92
DDR1-247ENST00000502955 LAMC3Q9Y6N6 1575 aa26.9■■□□□ 1.9
DDR1-247ENST00000502955 THOC2Q8NI27 1593 aaKnown RBP26.87■■□□□ 1.89
DDR1-247ENST00000502955 MROH2BQ7Z745 1585 aa26.85■■□□□ 1.89
DDR1-247ENST00000502955 PDS5BQ9NTI5 1447 aa26.73■■□□□ 1.87
DDR1-247ENST00000502955 KIF21AQ7Z4S6 1674 aa26.72■■□□□ 1.87
DDR1-247ENST00000502955 CADPSQ9ULU8 1353 aa26.61■■□□□ 1.85
DDR1-247ENST00000502955 WIZO95785 1651 aa26.51■■□□□ 1.83
DDR1-247ENST00000502955 MRC2Q9UBG0 1479 aa26.5■■□□□ 1.83
DDR1-247ENST00000502955 WDR62O43379 1518 aa26.47■■□□□ 1.83
DDR1-247ENST00000502955 CEP164Q9UPV0 1460 aa26.35■■□□□ 1.81
DDR1-247ENST00000502955 FANCD2Q9BXW9 1451 aa26.3■■□□□ 1.8
DDR1-247ENST00000502955 CFTRP13569 1480 aa26.29■■□□□ 1.8
DDR1-247ENST00000502955 RSF1Q96T23 1441 aaPredicted RBP26.23■■□□□ 1.79
DDR1-247ENST00000502955 TOP2AP11388 1531 aaKnown RBP26.19■■□□□ 1.78
DDR1-247ENST00000502955 TRIM41Q8WV44 630 aa26.14■■□□□ 1.78
DDR1-247ENST00000502955 URB2Q14146 1524 aaKnown RBP26.09■■□□□ 1.77
DDR1-247ENST00000502955 OSCARQ8IYS5 282 aa26.02■■□□□ 1.76
DDR1-247ENST00000502955 PRDM2Q13029 1718 aa26.01■■□□□ 1.75
DDR1-247ENST00000502955 CCDC88BA6NC98 1476 aa25.87■■□□□ 1.73
DDR1-247ENST00000502955 IFT140Q96RY7 1462 aa25.84■■□□□ 1.73
DDR1-247ENST00000502955 ZNF608Q9ULD9 1512 aaPredicted RBP25.78■■□□□ 1.72
DDR1-247ENST00000502955 TOPBP1Q92547 1522 aa25.78■■□□□ 1.72
DDR1-247ENST00000502955 ABCC8Q09428 1581 aa25.75■■□□□ 1.71
DDR1-247ENST00000502955 RIMBP3CA6NJZ7 1639 aa25.71■■□□□ 1.71
DDR1-247ENST00000502955 RIMBP3BA6NNM3 1639 aa25.71■■□□□ 1.71
DDR1-247ENST00000502955 RIMBP3Q9UFD9 1639 aa25.71■■□□□ 1.71
DDR1-247ENST00000502955 DNMBPQ6XZF7 1577 aa25.68■■□□□ 1.7
DDR1-247ENST00000502955 EIF4G3O43432 1585 aaKnown RBP25.65■■□□□ 1.7
DDR1-247ENST00000502955 ARHGEF11O15085 1522 aa25.63■■□□□ 1.69
DDR1-247ENST00000502955 TARBP1Q13395 1621 aaKnown RBP25.59■■□□□ 1.69
DDR1-247ENST00000502955 AQRO60306 1485 aaKnown RBP eCLIP25.51■■□□□ 1.672e-7■■■■■ 31.6
DDR1-247ENST00000502955 POLA1P09884 1462 aaPredicted RBP25.5■■□□□ 1.67
DDR1-247ENST00000502955 CHD1O14646 1710 aa25.49■■□□□ 1.67
DDR1-247ENST00000502955 CYB5RLQ6IPT4 315 aa25.38■■□□□ 1.65
DDR1-247ENST00000502955 RAD54L2Q9Y4B4 1467 aa25.37■■□□□ 1.65
DDR1-247ENST00000502955 WDR97A6NE52 1622 aa25.37■■□□□ 1.65
DDR1-247ENST00000502955 SOGA1O94964 1423 aa25.36■■□□□ 1.65
DDR1-247ENST00000502955 ARAP1Q96P48 1450 aa25.34■■□□□ 1.65
DDR1-247ENST00000502955 FBLN2P98095 1184 aa25.32■■□□□ 1.64
DDR1-247ENST00000502955 TDRD9Q8NDG6 1382 aaKnown RBP25.31■■□□□ 1.64
DDR1-247ENST00000502955 FGD5Q6ZNL6 1462 aa25.29■■□□□ 1.64
DDR1-247ENST00000502955 SNAPC4Q5SXM2 1469 aa25.26■■□□□ 1.63
DDR1-247ENST00000502955 CUX1P39880 1505 aa25.25■■□□□ 1.63
DDR1-247ENST00000502955 CLASP1Q7Z460 1538 aa25.23■■□□□ 1.63
DDR1-247ENST00000502955 MAGI1Q96QZ7 1491 aaPredicted RBP25.23■■□□□ 1.63
DDR1-247ENST00000502955 GRIN2BQ13224 1484 aa25.19■■□□□ 1.62
DDR1-247ENST00000502955 SYNJ1O43426 1573 aa25.18■■□□□ 1.62
DDR1-247ENST00000502955 CHMP7Q8WUX9 453 aaPredicted RBP25.16■■□□□ 1.62
DDR1-247ENST00000502955 SYNJ2O15056 1496 aa25.15■■□□□ 1.62
DDR1-247ENST00000502955 TRHP20396 242 aaPredicted RBP25.14■■□□□ 1.62
DDR1-247ENST00000502955 PBRM1Q86U86 1689 aa25.07■■□□□ 1.6
DDR1-247ENST00000502955 GAPVD1Q14C86 1478 aa25.06■■□□□ 1.6
DDR1-247ENST00000502955 ABCA10Q8WWZ4 1543 aa25.03■■□□□ 1.6
DDR1-247ENST00000502955 ABCA5Q8WWZ7 1642 aa25.01■■□□□ 1.59
DDR1-247ENST00000502955 WRNQ14191 1432 aaPredicted RBP eCLIP24.87■■□□□ 1.57
DDR1-247ENST00000502955 GRIN2AQ12879 1464 aa24.87■■□□□ 1.57
DDR1-247ENST00000502955 ADAMTS12P58397 1594 aa24.83■■□□□ 1.57
DDR1-247ENST00000502955 TOP2BQ02880 1626 aa24.82■■□□□ 1.56
DDR1-247ENST00000502955 BIVM-ERCC5R4GMW8 1640 aa24.82■■□□□ 1.56
DDR1-247ENST00000502955 NUP160Q12769 1436 aa24.81■■□□□ 1.56
DDR1-247ENST00000502955 SUPT5HO00267 1087 aaKnown RBP24.78■■□□□ 1.56
DDR1-247ENST00000502955 CEP170Q5SW79 1584 aa24.78■■□□□ 1.56
DDR1-247ENST00000502955 ERCC6L2Q5T890 1561 aa24.76■■□□□ 1.55
DDR1-247ENST00000502955 FHAD1B1AJZ9 1412 aa24.75■■□□□ 1.55
DDR1-247ENST00000502955 SHROOM2Q13796 1616 aa24.75■■□□□ 1.55
DDR1-247ENST00000502955 ERICH3Q5RHP9 1530 aa24.73■■□□□ 1.55
DDR1-247ENST00000502955 AEBP2Q6ZN18 517 aaPredicted RBP24.56■■□□□ 1.52
DDR1-247ENST00000502955 PRG4Q92954 1404 aaPredicted RBP24.54■■□□□ 1.52
DDR1-247ENST00000502955 JPH4Q96JJ6 628 aa24.51■■□□□ 1.51
DDR1-247ENST00000502955 KIF13AQ9H1H9 1805 aa24.49■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms