RNA–Protein interactions for RNA: ENST00000502945.1

PDE8B-206, Transcript of phosphodiesterase 8B, humanhuman

TSL 4

Gene PDE8B, Length 535 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE8B-206ENST00000502945 NISCHQ9Y2I1 1504 aa32.26■■■□□ 2.76
PDE8B-206ENST00000502945 CCDC180Q9P1Z9 1646 aa29.09■■■□□ 2.25
PDE8B-206ENST00000502945 ABCC9O60706 1549 aa29.04■■■□□ 2.24
PDE8B-206ENST00000502945 RB1CC1Q8TDY2 1594 aa27.67■■■□□ 2.02
PDE8B-206ENST00000502945 NACADO15069 1562 aa27.46■■□□□ 1.99
PDE8B-206ENST00000502945 DNAJC5BQ9UF47 199 aa27.3■■□□□ 1.96
PDE8B-206ENST00000502945 UNC13AQ9UPW8 1703 aa27.11■■□□□ 1.93
PDE8B-206ENST00000502945 DCAF8L2P0C7V8 631 aa27.08■■□□□ 1.93
PDE8B-206ENST00000502945 MYO15BQ96JP2 1530 aa27.07■■□□□ 1.92
PDE8B-206ENST00000502945 PABPN1Q86U42 306 aaKnown RBP eCLIP26.95■■□□□ 1.9
PDE8B-206ENST00000502945 BICRAQ9NZM4 1560 aa26.89■■□□□ 1.9
PDE8B-206ENST00000502945 ZCCHC6Q5VYS8 1495 aaKnown RBP26.74■■□□□ 1.87
PDE8B-206ENST00000502945 DCAF1Q9Y4B6 1507 aa26.69■■□□□ 1.86
PDE8B-206ENST00000502945 SHROOM4Q9ULL8 1493 aa26.54■■□□□ 1.84
PDE8B-206ENST00000502945 SCRIBQ14160 1630 aa26.4■■□□□ 1.82
PDE8B-206ENST00000502945 CC2D2AQ9P2K1 1620 aa26.29■■□□□ 1.8
PDE8B-206ENST00000502945 EIF4G1Q04637 1599 aaKnown RBP26.21■■□□□ 1.79
PDE8B-206ENST00000502945 CECR2Q9BXF3 1484 aa26.19■■□□□ 1.78
PDE8B-206ENST00000502945 NCAPD3P42695 1498 aa25.33■■□□□ 1.65
PDE8B-206ENST00000502945 ATAD2BQ9ULI0 1458 aa25.22■■□□□ 1.63
PDE8B-206ENST00000502945 SMARCA4P51532 1647 aa25.21■■□□□ 1.63
PDE8B-206ENST00000502945 SMARCA2P51531 1590 aa25.17■■□□□ 1.62
PDE8B-206ENST00000502945 HMGXB3Q12766 1538 aa25.17■■□□□ 1.62
PDE8B-206ENST00000502945 DNAJC5Q9H3Z4 198 aa25.16■■□□□ 1.62
PDE8B-206ENST00000502945 CUX2O14529 1486 aa25.12■■□□□ 1.61
PDE8B-206ENST00000502945 ERCC6Q03468 1493 aa25.07■■□□□ 1.6
PDE8B-206ENST00000502945 BAZ1AQ9NRL2 1556 aaPredicted RBP25.06■■□□□ 1.6
PDE8B-206ENST00000502945 PEG3Q9GZU2 1588 aa25■■□□□ 1.59
PDE8B-206ENST00000502945 BAZ1BQ9UIG0 1483 aaKnown RBP24.96■■□□□ 1.59
PDE8B-206ENST00000502945 NESP48681 1621 aa24.94■■□□□ 1.58
PDE8B-206ENST00000502945 MROH2BQ7Z745 1585 aa24.84■■□□□ 1.57
PDE8B-206ENST00000502945 LAMC3Q9Y6N6 1575 aa24.8■■□□□ 1.56
PDE8B-206ENST00000502945 THOC2Q8NI27 1593 aaKnown RBP24.79■■□□□ 1.56
PDE8B-206ENST00000502945 KIF21AQ7Z4S6 1674 aa24.68■■□□□ 1.54
PDE8B-206ENST00000502945 PDS5BQ9NTI5 1447 aa24.6■■□□□ 1.53
PDE8B-206ENST00000502945 WIZO95785 1651 aa24.56■■□□□ 1.52
PDE8B-206ENST00000502945 CADPSQ9ULU8 1353 aa24.51■■□□□ 1.51
PDE8B-206ENST00000502945 MRC2Q9UBG0 1479 aa24.42■■□□□ 1.5
PDE8B-206ENST00000502945 WDR62O43379 1518 aa24.4■■□□□ 1.5
PDE8B-206ENST00000502945 CEP164Q9UPV0 1460 aa24.3■■□□□ 1.48
PDE8B-206ENST00000502945 RSF1Q96T23 1441 aaPredicted RBP24.27■■□□□ 1.48
PDE8B-206ENST00000502945 TOP2AP11388 1531 aaKnown RBP24.25■■□□□ 1.47
PDE8B-206ENST00000502945 CFTRP13569 1480 aa24.25■■□□□ 1.47
PDE8B-206ENST00000502945 FANCD2Q9BXW9 1451 aa24.25■■□□□ 1.47
PDE8B-206ENST00000502945 PRDM2Q13029 1718 aa24.1■■□□□ 1.45
PDE8B-206ENST00000502945 URB2Q14146 1524 aaKnown RBP24.08■■□□□ 1.45
PDE8B-206ENST00000502945 TRIM41Q8WV44 630 aa23.95■■□□□ 1.42
PDE8B-206ENST00000502945 CCDC88BA6NC98 1476 aa23.94■■□□□ 1.42
PDE8B-206ENST00000502945 OSCARQ8IYS5 282 aa23.86■■□□□ 1.41
PDE8B-206ENST00000502945 IFT140Q96RY7 1462 aa23.81■■□□□ 1.4
PDE8B-206ENST00000502945 TOPBP1Q92547 1522 aa23.79■■□□□ 1.4
PDE8B-206ENST00000502945 ZNF608Q9ULD9 1512 aaPredicted RBP23.78■■□□□ 1.4
PDE8B-206ENST00000502945 ABCC8Q09428 1581 aa23.74■■□□□ 1.39
PDE8B-206ENST00000502945 DNMBPQ6XZF7 1577 aa23.73■■□□□ 1.39
PDE8B-206ENST00000502945 EIF4G3O43432 1585 aaKnown RBP23.7■■□□□ 1.38
PDE8B-206ENST00000502945 RIMBP3CA6NJZ7 1639 aa23.67■■□□□ 1.38
PDE8B-206ENST00000502945 RIMBP3BA6NNM3 1639 aa23.67■■□□□ 1.38
PDE8B-206ENST00000502945 RIMBP3Q9UFD9 1639 aa23.67■■□□□ 1.38
PDE8B-206ENST00000502945 TARBP1Q13395 1621 aaKnown RBP23.64■■□□□ 1.38
PDE8B-206ENST00000502945 ARHGEF11O15085 1522 aa23.57■■□□□ 1.36
PDE8B-206ENST00000502945 CHD1O14646 1710 aa23.56■■□□□ 1.36
PDE8B-206ENST00000502945 POLA1P09884 1462 aaPredicted RBP23.55■■□□□ 1.36
PDE8B-206ENST00000502945 AQRO60306 1485 aaKnown RBP eCLIP23.52■■□□□ 1.36
PDE8B-206ENST00000502945 RAD54L2Q9Y4B4 1467 aa23.43■■□□□ 1.34
PDE8B-206ENST00000502945 WDR97A6NE52 1622 aa23.42■■□□□ 1.34
PDE8B-206ENST00000502945 SOGA1O94964 1423 aa23.39■■□□□ 1.33
PDE8B-206ENST00000502945 FGD5Q6ZNL6 1462 aa23.37■■□□□ 1.33
PDE8B-206ENST00000502945 CUX1P39880 1505 aa23.35■■□□□ 1.33
PDE8B-206ENST00000502945 TDRD9Q8NDG6 1382 aaKnown RBP23.34■■□□□ 1.33
PDE8B-206ENST00000502945 ARAP1Q96P48 1450 aa23.32■■□□□ 1.32
PDE8B-206ENST00000502945 SNAPC4Q5SXM2 1469 aa23.3■■□□□ 1.32
PDE8B-206ENST00000502945 FBLN2P98095 1184 aa23.3■■□□□ 1.32
PDE8B-206ENST00000502945 CYB5RLQ6IPT4 315 aa23.29■■□□□ 1.32
PDE8B-206ENST00000502945 CLASP1Q7Z460 1538 aa23.28■■□□□ 1.32
PDE8B-206ENST00000502945 MAGI1Q96QZ7 1491 aaPredicted RBP23.26■■□□□ 1.31
PDE8B-206ENST00000502945 GRIN2BQ13224 1484 aa23.24■■□□□ 1.31
PDE8B-206ENST00000502945 SYNJ1O43426 1573 aa23.23■■□□□ 1.31
PDE8B-206ENST00000502945 PBRM1Q86U86 1689 aa23.21■■□□□ 1.31
PDE8B-206ENST00000502945 SYNJ2O15056 1496 aa23.17■■□□□ 1.3
PDE8B-206ENST00000502945 ABCA5Q8WWZ7 1642 aa23.15■■□□□ 1.3
PDE8B-206ENST00000502945 CHMP7Q8WUX9 453 aaPredicted RBP23.14■■□□□ 1.29
PDE8B-206ENST00000502945 GAPVD1Q14C86 1478 aa23.12■■□□□ 1.29
PDE8B-206ENST00000502945 ABCA10Q8WWZ4 1543 aa23.12■■□□□ 1.29
PDE8B-206ENST00000502945 TRHP20396 242 aaPredicted RBP23.04■■□□□ 1.28
PDE8B-206ENST00000502945 BIVM-ERCC5R4GMW8 1640 aa23■■□□□ 1.27
PDE8B-206ENST00000502945 SUPT5HO00267 1087 aaKnown RBP22.99■■□□□ 1.27
PDE8B-206ENST00000502945 TOP2BQ02880 1626 aa22.97■■□□□ 1.27
PDE8B-206ENST00000502945 WRNQ14191 1432 aaPredicted RBP eCLIP22.96■■□□□ 1.27
PDE8B-206ENST00000502945 ADAMTS12P58397 1594 aa22.96■■□□□ 1.27
PDE8B-206ENST00000502945 GRIN2AQ12879 1464 aa22.95■■□□□ 1.26
PDE8B-206ENST00000502945 CEP170Q5SW79 1584 aa22.89■■□□□ 1.26
PDE8B-206ENST00000502945 NUP160Q12769 1436 aa22.88■■□□□ 1.25
PDE8B-206ENST00000502945 ERCC6L2Q5T890 1561 aa22.87■■□□□ 1.25
PDE8B-206ENST00000502945 SHROOM2Q13796 1616 aa22.85■■□□□ 1.25
PDE8B-206ENST00000502945 ERICH3Q5RHP9 1530 aa22.84■■□□□ 1.25
PDE8B-206ENST00000502945 FHAD1B1AJZ9 1412 aa22.83■■□□□ 1.25
PDE8B-206ENST00000502945 RUSC2Q8N2Y8 1516 aa22.66■■□□□ 1.22
PDE8B-206ENST00000502945 PRG4Q92954 1404 aaPredicted RBP22.62■■□□□ 1.21
PDE8B-206ENST00000502945 KIF13AQ9H1H9 1805 aa22.59■■□□□ 1.21
PDE8B-206ENST00000502945 JPH4Q96JJ6 628 aa22.56■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 90.3 ms